RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 NACADO15069 1562 aa13.95□□□□□ -0.18
PAAF1-212ENST00000543079 PPP1R37O75864 691 aa13.92□□□□□ -0.18
PAAF1-212ENST00000543079 DOK7Q18PE1 504 aa13.91□□□□□ -0.18
PAAF1-212ENST00000543079 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
PAAF1-212ENST00000543079 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
PAAF1-212ENST00000543079 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
PAAF1-212ENST00000543079 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
PAAF1-212ENST00000543079 KIF3CO14782 793 aa13.85□□□□□ -0.19
PAAF1-212ENST00000543079 RIMBP2O15034 1052 aa13.84□□□□□ -0.19
PAAF1-212ENST00000543079 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
PAAF1-212ENST00000543079 RYDENQ9NUL5 291 aaKnown RBP13.84□□□□□ -0.19
PAAF1-212ENST00000543079 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.19
PAAF1-212ENST00000543079 HOXB1P14653 301 aaPredicted RBP13.83□□□□□ -0.2
PAAF1-212ENST00000543079 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
PAAF1-212ENST00000543079 EMP3P54852 163 aa13.82□□□□□ -0.2
PAAF1-212ENST00000543079 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
PAAF1-212ENST00000543079 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
PAAF1-212ENST00000543079 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
PAAF1-212ENST00000543079 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PAAF1-212ENST00000543079 PLSCR2Q9NRY7 297 aa13.75□□□□□ -0.21
PAAF1-212ENST00000543079 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
PAAF1-212ENST00000543079 FAM205CA6NFA0 338 aa13.74□□□□□ -0.21
PAAF1-212ENST00000543079 GPR153Q6NV75 609 aa13.74□□□□□ -0.21
PAAF1-212ENST00000543079 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
PAAF1-212ENST00000543079 HS3ST6Q96QI5 342 aa13.73□□□□□ -0.21
PAAF1-212ENST00000543079 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
PAAF1-212ENST00000543079 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
PAAF1-212ENST00000543079 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
PAAF1-212ENST00000543079 GPHNQ9NQX3 736 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-212ENST00000543079 SLC34A2O95436 690 aa13.68□□□□□ -0.22
PAAF1-212ENST00000543079 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
PAAF1-212ENST00000543079 ERBB3P21860 1342 aa13.66□□□□□ -0.22
PAAF1-212ENST00000543079 FOXK1P85037 733 aa13.66□□□□□ -0.22
PAAF1-212ENST00000543079 PLPP6Q8IY26 295 aa13.6□□□□□ -0.23
PAAF1-212ENST00000543079 KHSRPQ92945 711 aaKnown RBP eCLIP13.6□□□□□ -0.23
PAAF1-212ENST00000543079 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
PAAF1-212ENST00000543079 DSG2Q14126 1118 aa13.59□□□□□ -0.23
PAAF1-212ENST00000543079 VARS2Q5ST30 1063 aaKnown RBP13.59□□□□□ -0.23
PAAF1-212ENST00000543079 BBXQ8WY36 941 aaPredicted RBP13.59□□□□□ -0.23
PAAF1-212ENST00000543079 CRISPLD2Q9H0B8 497 aa13.58□□□□□ -0.24
PAAF1-212ENST00000543079 KRTAP3-3Q9BYR6 98 aa13.57□□□□□ -0.24
PAAF1-212ENST00000543079 KRTAP3-2Q9BYR7 98 aa13.57□□□□□ -0.24
PAAF1-212ENST00000543079 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
PAAF1-212ENST00000543079 PDE4AP27815 886 aa13.55□□□□□ -0.24
PAAF1-212ENST00000543079 PTCD2Q8WV60 388 aaKnown RBP13.55□□□□□ -0.24
PAAF1-212ENST00000543079 EIF4G1Q04637 1599 aaKnown RBP13.54□□□□□ -0.24
PAAF1-212ENST00000543079 NUDT7P0C024 238 aa13.53□□□□□ -0.24
PAAF1-212ENST00000543079 ZNF687Q8N1G0 1237 aa13.53□□□□□ -0.24
PAAF1-212ENST00000543079 NCKAP5LQ9HCH0 1330 aa13.53□□□□□ -0.24
PAAF1-212ENST00000543079 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
PAAF1-212ENST00000543079 SHROOM4Q9ULL8 1493 aa13.5□□□□□ -0.25
PAAF1-212ENST00000543079 SPNS2Q8IVW8 549 aa13.5□□□□□ -0.25
PAAF1-212ENST00000543079 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
PAAF1-212ENST00000543079 KDM4FA0A1W2PPD8 638 aa13.47□□□□□ -0.25
PAAF1-212ENST00000543079 TBC1D12O60347 775 aa13.47□□□□□ -0.25
PAAF1-212ENST00000543079 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
PAAF1-212ENST00000543079 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
PAAF1-212ENST00000543079 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
PAAF1-212ENST00000543079 ZCCHC6Q5VYS8 1495 aaKnown RBP13.43□□□□□ -0.26
PAAF1-212ENST00000543079 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
PAAF1-212ENST00000543079 CUX2O14529 1486 aa13.42□□□□□ -0.26
PAAF1-212ENST00000543079 MFSD10Q14728 455 aa13.42□□□□□ -0.26
PAAF1-212ENST00000543079 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
PAAF1-212ENST00000543079 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
PAAF1-212ENST00000543079 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
PAAF1-212ENST00000543079 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
PAAF1-212ENST00000543079 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-212ENST00000543079 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
PAAF1-212ENST00000543079 PBX2P40425 430 aa13.34□□□□□ -0.27
PAAF1-212ENST00000543079 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
PAAF1-212ENST00000543079 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
PAAF1-212ENST00000543079 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
PAAF1-212ENST00000543079 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
PAAF1-212ENST00000543079 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
PAAF1-212ENST00000543079 LSM11P83369 360 aaKnown RBP eCLIP13.28□□□□□ -0.28
PAAF1-212ENST00000543079 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
PAAF1-212ENST00000543079 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
PAAF1-212ENST00000543079 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
PAAF1-212ENST00000543079 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
PAAF1-212ENST00000543079 AXIN2Q9Y2T1 843 aa13.27□□□□□ -0.29
PAAF1-212ENST00000543079 ARHGAP33O14559 1287 aa13.26□□□□□ -0.29
PAAF1-212ENST00000543079 MAP3K9P80192 1104 aa13.26□□□□□ -0.29
PAAF1-212ENST00000543079 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
PAAF1-212ENST00000543079 EVI5O60447 810 aa13.24□□□□□ -0.29
PAAF1-212ENST00000543079 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
PAAF1-212ENST00000543079 PTGER2P43116 358 aa13.22□□□□□ -0.29
PAAF1-212ENST00000543079 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
PAAF1-212ENST00000543079 FOSBP53539 338 aa13.19□□□□□ -0.3
PAAF1-212ENST00000543079 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
PAAF1-212ENST00000543079 JPH4Q96JJ6 628 aa13.17□□□□□ -0.3
PAAF1-212ENST00000543079 PSEN2P49810 448 aa13.16□□□□□ -0.3
PAAF1-212ENST00000543079 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
PAAF1-212ENST00000543079 TK2O00142 265 aa13.14□□□□□ -0.31
PAAF1-212ENST00000543079 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
PAAF1-212ENST00000543079 ADGRD1Q6QNK2 874 aa13.13□□□□□ -0.31
PAAF1-212ENST00000543079 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
PAAF1-212ENST00000543079 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
PAAF1-212ENST00000543079 DPYSL4O14531 572 aa13.11□□□□□ -0.31
PAAF1-212ENST00000543079 ZDHHC16Q969W1 377 aa13.11□□□□□ -0.31
PAAF1-212ENST00000543079 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms