RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
GTF2H3-210ENST00000543005 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
GTF2H3-210ENST00000543005 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
GTF2H3-210ENST00000543005 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
GTF2H3-210ENST00000543005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
GTF2H3-210ENST00000543005 ARSIQ5FYB1 569 aa11.35□□□□□ -0.59
GTF2H3-210ENST00000543005 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
GTF2H3-210ENST00000543005 ZNF316A6NFI3 1004 aaPredicted RBP11.33□□□□□ -0.6
GTF2H3-210ENST00000543005 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF2H3-210ENST00000543005 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
GTF2H3-210ENST00000543005 NLRP6P59044 892 aa11.28□□□□□ -0.6
GTF2H3-210ENST00000543005 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
GTF2H3-210ENST00000543005 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
GTF2H3-210ENST00000543005 KIF3CO14782 793 aa11.26□□□□□ -0.61
GTF2H3-210ENST00000543005 PBX2P40425 430 aa11.26□□□□□ -0.61
GTF2H3-210ENST00000543005 SLC34A2O95436 690 aa11.2□□□□□ -0.62
GTF2H3-210ENST00000543005 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
GTF2H3-210ENST00000543005 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
GTF2H3-210ENST00000543005 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
GTF2H3-210ENST00000543005 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
GTF2H3-210ENST00000543005 BCL11BQ9C0K0 894 aaPredicted RBP11.17□□□□□ -0.62
GTF2H3-210ENST00000543005 NUDT7P0C024 238 aa11.16□□□□□ -0.62
GTF2H3-210ENST00000543005 LHX6Q9UPM6 363 aa11.15□□□□□ -0.62
GTF2H3-210ENST00000543005 PCDHGA4Q9Y5G9 962 aa11.14□□□□□ -0.63
GTF2H3-210ENST00000543005 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
GTF2H3-210ENST00000543005 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
GTF2H3-210ENST00000543005 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
GTF2H3-210ENST00000543005 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
GTF2H3-210ENST00000543005 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
GTF2H3-210ENST00000543005 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
GTF2H3-210ENST00000543005 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
GTF2H3-210ENST00000543005 KDM4FA0A1W2PPD8 638 aa11.06□□□□□ -0.64
GTF2H3-210ENST00000543005 TK2O00142 265 aa11.04□□□□□ -0.64
GTF2H3-210ENST00000543005 STK25O00506 426 aa11.04□□□□□ -0.64
GTF2H3-210ENST00000543005 TMC2Q8TDI7 906 aa11.04□□□□□ -0.64
GTF2H3-210ENST00000543005 HRO43593 1189 aa11.01□□□□□ -0.65
GTF2H3-210ENST00000543005 PTCD2Q8WV60 388 aaKnown RBP11□□□□□ -0.65
GTF2H3-210ENST00000543005 DMRTA1Q5VZB9 504 aa10.94□□□□□ -0.66
GTF2H3-210ENST00000543005 PPP1R37O75864 691 aa10.92□□□□□ -0.66
GTF2H3-210ENST00000543005 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
GTF2H3-210ENST00000543005 PSEN2P49810 448 aa10.91□□□□□ -0.66
GTF2H3-210ENST00000543005 FOXK1P85037 733 aa10.91□□□□□ -0.66
GTF2H3-210ENST00000543005 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
GTF2H3-210ENST00000543005 RGL2O15211 777 aa10.86□□□□□ -0.67
GTF2H3-210ENST00000543005 KCTD12Q96CX2 325 aaKnown RBP10.86□□□□□ -0.67
GTF2H3-210ENST00000543005 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
GTF2H3-210ENST00000543005 RGS20O76081 388 aa10.85□□□□□ -0.67
GTF2H3-210ENST00000543005 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
GTF2H3-210ENST00000543005 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
GTF2H3-210ENST00000543005 PKD2Q13563 968 aa10.84□□□□□ -0.67
GTF2H3-210ENST00000543005 TBC1D12O60347 775 aa10.83□□□□□ -0.68
GTF2H3-210ENST00000543005 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
GTF2H3-210ENST00000543005 SLC4A5Q9BY07 1137 aa10.81□□□□□ -0.68
GTF2H3-210ENST00000543005 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
GTF2H3-210ENST00000543005 DSG2Q14126 1118 aa10.8□□□□□ -0.68
GTF2H3-210ENST00000543005 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
GTF2H3-210ENST00000543005 KCNK17Q96T54 332 aa10.79□□□□□ -0.68
GTF2H3-210ENST00000543005 OXER1Q8TDS5 423 aa10.76□□□□□ -0.69
GTF2H3-210ENST00000543005 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
GTF2H3-210ENST00000543005 BHMG1C9JSJ3 638 aaPredicted RBP10.74□□□□□ -0.69
GTF2H3-210ENST00000543005 PTPN5P54829 565 aa10.72□□□□□ -0.69
GTF2H3-210ENST00000543005 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
GTF2H3-210ENST00000543005 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
GTF2H3-210ENST00000543005 A0A0G2JS52 829 aa10.69□□□□□ -0.7
GTF2H3-210ENST00000543005 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
GTF2H3-210ENST00000543005 FOSBP53539 338 aa10.68□□□□□ -0.7
GTF2H3-210ENST00000543005 ZBED2Q9BTP6 218 aa10.67□□□□□ -0.7
GTF2H3-210ENST00000543005 IRX2Q9BZI1 471 aaPredicted RBP10.67□□□□□ -0.7
GTF2H3-210ENST00000543005 PTPREP23469 700 aa10.65□□□□□ -0.7
GTF2H3-210ENST00000543005 ANO8Q9HCE9 1232 aaPredicted RBP10.65□□□□□ -0.7
GTF2H3-210ENST00000543005 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
GTF2H3-210ENST00000543005 WNT2BQ93097 391 aa10.63□□□□□ -0.71
GTF2H3-210ENST00000543005 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
GTF2H3-210ENST00000543005 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
GTF2H3-210ENST00000543005 JPH4Q96JJ6 628 aa10.62□□□□□ -0.71
GTF2H3-210ENST00000543005 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
GTF2H3-210ENST00000543005 GOLGA8CPA6NN73 597 aa10.6□□□□□ -0.71
GTF2H3-210ENST00000543005 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
GTF2H3-210ENST00000543005 NBPF3Q9H094 633 aa10.59□□□□□ -0.71
GTF2H3-210ENST00000543005 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
GTF2H3-210ENST00000543005 ITGBL1O95965 494 aaPredicted RBP10.56□□□□□ -0.72
GTF2H3-210ENST00000543005 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
GTF2H3-210ENST00000543005 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
GTF2H3-210ENST00000543005 EVI5O60447 810 aa10.53□□□□□ -0.72
GTF2H3-210ENST00000543005 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
GTF2H3-210ENST00000543005 NCKAP5LQ9HCH0 1330 aa10.53□□□□□ -0.72
GTF2H3-210ENST00000543005 PDE4AP27815 886 aa10.51□□□□□ -0.73
GTF2H3-210ENST00000543005 RABGEF1Q9UJ41 708 aa10.51□□□□□ -0.73
GTF2H3-210ENST00000543005 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
GTF2H3-210ENST00000543005 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
GTF2H3-210ENST00000543005 ANKK1Q8NFD2 765 aa10.48□□□□□ -0.73
GTF2H3-210ENST00000543005 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
GTF2H3-210ENST00000543005 LAPTM4BQ86VI4 370 aa10.47□□□□□ -0.73
GTF2H3-210ENST00000543005 SOWAHBA6NEL2 793 aa10.44□□□□□ -0.74
GTF2H3-210ENST00000543005 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
GTF2H3-210ENST00000543005 MFSD10Q14728 455 aa10.43□□□□□ -0.74
GTF2H3-210ENST00000543005 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
GTF2H3-210ENST00000543005 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
GTF2H3-210ENST00000543005 COL9A1P20849 921 aa10.42□□□□□ -0.74
GTF2H3-210ENST00000543005 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms