RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 ARHGAP5Q13017 1502 aa26.51■■□□□ 1.83
SCNN1A-219ENST00000542966 HECW2Q9P2P5 1572 aa26.48■■□□□ 1.83
SCNN1A-219ENST00000542966 POGZQ7Z3K3 1410 aa26.47■■□□□ 1.83
SCNN1A-219ENST00000542966 ARHGEF40Q8TER5 1519 aa26.45■■□□□ 1.83
SCNN1A-219ENST00000542966 ARID4BQ4LE39 1312 aaPredicted RBP26.45■■□□□ 1.83
SCNN1A-219ENST00000542966 ZMYM4Q5VZL5 1548 aa26.44■■□□□ 1.82
SCNN1A-219ENST00000542966 YEATS2Q9ULM3 1422 aa26.42■■□□□ 1.82
SCNN1A-219ENST00000542966 CDC42BPBQ9Y5S2 1711 aa26.42■■□□□ 1.82
SCNN1A-219ENST00000542966 ZFYVE16Q7Z3T8 1539 aa26.41■■□□□ 1.82
SCNN1A-219ENST00000542966 PREX2Q70Z35 1606 aa26.4■■□□□ 1.82
SCNN1A-219ENST00000542966 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.82
SCNN1A-219ENST00000542966 MTUS2Q5JR59 1369 aa26.39■■□□□ 1.82
SCNN1A-219ENST00000542966 AFAP1Q8N556 730 aa26.37■■□□□ 1.81
SCNN1A-219ENST00000542966 CDC42BPAQ5VT25 1732 aa26.35■■□□□ 1.81
SCNN1A-219ENST00000542966 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
SCNN1A-219ENST00000542966 ZNF777Q9ULD5 760 aaPredicted RBP26.34■■□□□ 1.81
SCNN1A-219ENST00000542966 BCORL1Q5H9F3 1711 aa26.33■■□□□ 1.81
SCNN1A-219ENST00000542966 GPATCH8Q9UKJ3 1502 aaKnown RBP26.33■■□□□ 1.81
SCNN1A-219ENST00000542966 ADAMTSL3P82987 1691 aa26.32■■□□□ 1.8
SCNN1A-219ENST00000542966 MYT1LQ9UL68 1186 aa26.32■■□□□ 1.8
SCNN1A-219ENST00000542966 ABCC1P33527 1531 aa26.31■■□□□ 1.8
SCNN1A-219ENST00000542966 ARHGEF12Q9NZN5 1544 aa26.3■■□□□ 1.8
SCNN1A-219ENST00000542966 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
SCNN1A-219ENST00000542966 TRAPPC8Q9Y2L5 1435 aa26.3■■□□□ 1.8
SCNN1A-219ENST00000542966 EHBP1L1Q8N3D4 1523 aa26.29■■□□□ 1.8
SCNN1A-219ENST00000542966 KDM5CP41229 1560 aa26.29■■□□□ 1.8
SCNN1A-219ENST00000542966 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
SCNN1A-219ENST00000542966 ATP10AO60312 1499 aa26.28■■□□□ 1.8
SCNN1A-219ENST00000542966 SIGLEC1Q9BZZ2 1709 aa26.28■■□□□ 1.8
SCNN1A-219ENST00000542966 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
SCNN1A-219ENST00000542966 MADDQ8WXG6 1647 aa26.26■■□□□ 1.79
SCNN1A-219ENST00000542966 PTPRMP28827 1452 aa26.26■■□□□ 1.79
SCNN1A-219ENST00000542966 MLECQ14165 292 aa26.26■■□□□ 1.79
SCNN1A-219ENST00000542966 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
SCNN1A-219ENST00000542966 C9orf84Q5VXU9 1444 aa26.25■■□□□ 1.79
SCNN1A-219ENST00000542966 SAMD9LQ8IVG5 1584 aa26.24■■□□□ 1.79
SCNN1A-219ENST00000542966 HNRNPMP52272 730 aaKnown RBP eCLIP26.21■■□□□ 1.79
SCNN1A-219ENST00000542966 MLH3Q9UHC1 1453 aa26.21■■□□□ 1.79
SCNN1A-219ENST00000542966 TIAM1Q13009 1591 aa26.2■■□□□ 1.79
SCNN1A-219ENST00000542966 SYCP2Q9BX26 1530 aa26.2■■□□□ 1.79
SCNN1A-219ENST00000542966 DIP2CQ9Y2E4 1556 aa26.18■■□□□ 1.78
SCNN1A-219ENST00000542966 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
SCNN1A-219ENST00000542966 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
SCNN1A-219ENST00000542966 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
SCNN1A-219ENST00000542966 NCOA2Q15596 1464 aa26.15■■□□□ 1.78
SCNN1A-219ENST00000542966 PLEKHH2Q8IVE3 1493 aa26.15■■□□□ 1.78
SCNN1A-219ENST00000542966 ZNF644Q9H582 1327 aaPredicted RBP26.14■■□□□ 1.78
SCNN1A-219ENST00000542966 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
SCNN1A-219ENST00000542966 SUPT6HQ7KZ85 1726 aaKnown RBP26.13■■□□□ 1.77
SCNN1A-219ENST00000542966 SPAG9O60271 1321 aaKnown RBP26.12■■□□□ 1.77
SCNN1A-219ENST00000542966 KIDINS220Q9ULH0 1771 aa26.11■■□□□ 1.77
SCNN1A-219ENST00000542966 FBXO41Q8TF61 875 aa26.11■■□□□ 1.77
SCNN1A-219ENST00000542966 LRRC9Q6ZRR7 1453 aa26.11■■□□□ 1.77
SCNN1A-219ENST00000542966 REREQ9P2R6 1566 aa26.09■■□□□ 1.77
SCNN1A-219ENST00000542966 FER1L4A9Z1Z3 1794 aa26.08■■□□□ 1.77
SCNN1A-219ENST00000542966 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.77
SCNN1A-219ENST00000542966 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
SCNN1A-219ENST00000542966 ATP7AQ04656 1500 aa26.04■■□□□ 1.76
SCNN1A-219ENST00000542966 MBD5Q9P267 1494 aa26.03■■□□□ 1.76
SCNN1A-219ENST00000542966 AGLP35573 1532 aa26.02■■□□□ 1.76
SCNN1A-219ENST00000542966 INO80Q9ULG1 1556 aaPredicted RBP26.01■■□□□ 1.75
SCNN1A-219ENST00000542966 CAMSAP2Q08AD1 1489 aa26■■□□□ 1.75
SCNN1A-219ENST00000542966 APLP2Q06481 763 aa26■■□□□ 1.75
SCNN1A-219ENST00000542966 CEBPAP49715 358 aaPredicted RBP25.98■■□□□ 1.75
SCNN1A-219ENST00000542966 ESF1Q9H501 851 aaKnown RBP25.95■■□□□ 1.74
SCNN1A-219ENST00000542966 LMTK3Q96Q04 1460 aa25.95■■□□□ 1.74
SCNN1A-219ENST00000542966 A2MP01023 1474 aa25.94■■□□□ 1.74
SCNN1A-219ENST00000542966 CCDC141Q6ZP82 1450 aa25.93■■□□□ 1.74
SCNN1A-219ENST00000542966 HSPA2P54652 639 aa25.92■■□□□ 1.74
SCNN1A-219ENST00000542966 RTEL1-TNFRSF6BF6WH68 1400 aa25.9■■□□□ 1.74
SCNN1A-219ENST00000542966 RSPH4AQ5TD94 716 aa25.9■■□□□ 1.74
SCNN1A-219ENST00000542966 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
SCNN1A-219ENST00000542966 MYOM3Q5VTT5 1437 aa25.89■■□□□ 1.74
SCNN1A-219ENST00000542966 ADGBQ8N7X0 1667 aa25.87■■□□□ 1.73
SCNN1A-219ENST00000542966 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
SCNN1A-219ENST00000542966 GGT6Q6P531 493 aa25.85■■□□□ 1.73
SCNN1A-219ENST00000542966 MIA2Q96PC5 1412 aa25.85■■□□□ 1.73
SCNN1A-219ENST00000542966 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
SCNN1A-219ENST00000542966 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
SCNN1A-219ENST00000542966 CNTLNQ9NXG0 1405 aa25.83■■□□□ 1.73
SCNN1A-219ENST00000542966 C3P01024 1663 aa25.83■■□□□ 1.73
SCNN1A-219ENST00000542966 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
SCNN1A-219ENST00000542966 PREX1Q8TCU6 1659 aa25.78■■□□□ 1.72
SCNN1A-219ENST00000542966 ZMYM3Q14202 1370 aa25.77■■□□□ 1.72
SCNN1A-219ENST00000542966 UHRF1BP1Q6BDS2 1440 aa25.75■■□□□ 1.71
SCNN1A-219ENST00000542966 KIF3BO15066 747 aa25.75■■□□□ 1.71
SCNN1A-219ENST00000542966 CLTCQ00610 1675 aaKnown RBP25.74■■□□□ 1.71
SCNN1A-219ENST00000542966 MROH2AA6NES4 1674 aa25.73■■□□□ 1.71
SCNN1A-219ENST00000542966 CERKQ8TCT0 537 aa25.72■■□□□ 1.71
SCNN1A-219ENST00000542966 PTPN23Q9H3S7 1636 aa25.72■■□□□ 1.71
SCNN1A-219ENST00000542966 MAST1Q9Y2H9 1570 aa25.72■■□□□ 1.71
SCNN1A-219ENST00000542966 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
SCNN1A-219ENST00000542966 FGD6Q6ZV73 1430 aa25.71■■□□□ 1.71
SCNN1A-219ENST00000542966 SETD1BQ9UPS6 1966 aaKnown RBP25.67■■□□□ 1.7
SCNN1A-219ENST00000542966 ABCC5O15440 1437 aa25.66■■□□□ 1.7
SCNN1A-219ENST00000542966 NPATQ14207 1427 aa25.66■■□□□ 1.7
SCNN1A-219ENST00000542966 TCOF1Q13428 1488 aaKnown RBP25.65■■□□□ 1.7
SCNN1A-219ENST00000542966 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
SCNN1A-219ENST00000542966 DAPK1P53355 1430 aa25.63■■□□□ 1.69
SCNN1A-219ENST00000542966 WASHC2CQ9Y4E1 1318 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms