RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
DDX11-223ENST00000542838 MRS2Q9HD23 443 aa17.78■□□□□ 0.44
DDX11-223ENST00000542838 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
DDX11-223ENST00000542838 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
DDX11-223ENST00000542838 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
DDX11-223ENST00000542838 IQGAP2Q13576 1575 aa17.74■□□□□ 0.43
DDX11-223ENST00000542838 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
DDX11-223ENST00000542838 ZBED9Q6R2W3 1325 aa17.73■□□□□ 0.43
DDX11-223ENST00000542838 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
DDX11-223ENST00000542838 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
DDX11-223ENST00000542838 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
DDX11-223ENST00000542838 WDR62O43379 1518 aa17.71■□□□□ 0.43
DDX11-223ENST00000542838 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
DDX11-223ENST00000542838 DAPK1P53355 1430 aa17.7■□□□□ 0.42
DDX11-223ENST00000542838 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
DDX11-223ENST00000542838 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
DDX11-223ENST00000542838 ROCK1Q13464 1354 aa17.69■□□□□ 0.42
DDX11-223ENST00000542838 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
DDX11-223ENST00000542838 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
DDX11-223ENST00000542838 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
DDX11-223ENST00000542838 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
DDX11-223ENST00000542838 ABCC5O15440 1437 aa17.66■□□□□ 0.42
DDX11-223ENST00000542838 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
DDX11-223ENST00000542838 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
DDX11-223ENST00000542838 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
DDX11-223ENST00000542838 CNGB1Q14028 1251 aaPredicted RBP17.6■□□□□ 0.41
DDX11-223ENST00000542838 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.4
DDX11-223ENST00000542838 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
DDX11-223ENST00000542838 PZPP20742 1482 aa17.57■□□□□ 0.4
DDX11-223ENST00000542838 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
DDX11-223ENST00000542838 DHX29Q7Z478 1369 aaKnown RBP17.56■□□□□ 0.4
DDX11-223ENST00000542838 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
DDX11-223ENST00000542838 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
DDX11-223ENST00000542838 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
DDX11-223ENST00000542838 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
DDX11-223ENST00000542838 USP47Q96K76 1375 aa17.54■□□□□ 0.4
DDX11-223ENST00000542838 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
DDX11-223ENST00000542838 RAPGEF6Q8TEU7 1601 aa17.53■□□□□ 0.4
DDX11-223ENST00000542838 DISP1Q96F81 1524 aa17.52■□□□□ 0.4
DDX11-223ENST00000542838 MBD5Q9P267 1494 aa17.52■□□□□ 0.4
DDX11-223ENST00000542838 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
DDX11-223ENST00000542838 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
DDX11-223ENST00000542838 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
DDX11-223ENST00000542838 ADGBQ8N7X0 1667 aa17.5■□□□□ 0.39
DDX11-223ENST00000542838 KIAA0586Q9BVV6 1533 aa17.5■□□□□ 0.39
DDX11-223ENST00000542838 KIF14Q15058 1648 aa17.49■□□□□ 0.39
DDX11-223ENST00000542838 PKD2Q13563 968 aa17.49■□□□□ 0.39
DDX11-223ENST00000542838 PRG4Q92954 1404 aaPredicted RBP17.48■□□□□ 0.39
DDX11-223ENST00000542838 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
DDX11-223ENST00000542838 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
DDX11-223ENST00000542838 KDM5CP41229 1560 aa17.48■□□□□ 0.39
DDX11-223ENST00000542838 ZNF777Q9ULD5 760 aaPredicted RBP17.48■□□□□ 0.39
DDX11-223ENST00000542838 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
DDX11-223ENST00000542838 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
DDX11-223ENST00000542838 TROQ12816 1431 aaPredicted RBP17.47■□□□□ 0.39
DDX11-223ENST00000542838 ITSN2Q9NZM3 1697 aa17.47■□□□□ 0.39
DDX11-223ENST00000542838 SENP3-EIF4A1A0A087X0R7 540 aa17.46■□□□□ 0.39
DDX11-223ENST00000542838 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
DDX11-223ENST00000542838 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
DDX11-223ENST00000542838 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
DDX11-223ENST00000542838 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
DDX11-223ENST00000542838 PNISRQ8TF01 805 aaKnown RBP17.44■□□□□ 0.38
DDX11-223ENST00000542838 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
DDX11-223ENST00000542838 GPATCH8Q9UKJ3 1502 aaKnown RBP17.43■□□□□ 0.38
DDX11-223ENST00000542838 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
DDX11-223ENST00000542838 ANKRD30AQ9BXX3 1397 aa17.43■□□□□ 0.38
DDX11-223ENST00000542838 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
DDX11-223ENST00000542838 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
DDX11-223ENST00000542838 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
DDX11-223ENST00000542838 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
DDX11-223ENST00000542838 UHRF1BP1Q6BDS2 1440 aa17.4■□□□□ 0.38
DDX11-223ENST00000542838 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
DDX11-223ENST00000542838 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
DDX11-223ENST00000542838 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
DDX11-223ENST00000542838 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
DDX11-223ENST00000542838 DEKP35659 375 aaKnown RBP17.39■□□□□ 0.37
DDX11-223ENST00000542838 ADCY10Q96PN6 1610 aa17.38■□□□□ 0.37
DDX11-223ENST00000542838 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
DDX11-223ENST00000542838 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
DDX11-223ENST00000542838 NBR1Q14596 966 aa17.37■□□□□ 0.37
DDX11-223ENST00000542838 NUP155O75694 1391 aa17.37■□□□□ 0.37
DDX11-223ENST00000542838 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
DDX11-223ENST00000542838 ST20-MTHFSA0A0A6YYL1 179 aa17.35■□□□□ 0.37
DDX11-223ENST00000542838 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
DDX11-223ENST00000542838 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
DDX11-223ENST00000542838 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
DDX11-223ENST00000542838 BRD4O60885 1362 aaPredicted RBP17.34■□□□□ 0.37
DDX11-223ENST00000542838 ARHGEF12Q9NZN5 1544 aa17.34■□□□□ 0.37
DDX11-223ENST00000542838 RALBP1Q15311 655 aa17.33■□□□□ 0.36
DDX11-223ENST00000542838 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
DDX11-223ENST00000542838 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
DDX11-223ENST00000542838 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
DDX11-223ENST00000542838 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
DDX11-223ENST00000542838 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
DDX11-223ENST00000542838 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
DDX11-223ENST00000542838 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
DDX11-223ENST00000542838 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
DDX11-223ENST00000542838 E9PCH4 1651 aa17.28■□□□□ 0.36
DDX11-223ENST00000542838 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
DDX11-223ENST00000542838 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms