RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-222ENST00000542777 MAGI2Q86UL8 1455 aa26.32■■□□□ 1.8
DDX11-222ENST00000542777 TROQ12816 1431 aaPredicted RBP26.31■■□□□ 1.8
DDX11-222ENST00000542777 KIF14Q15058 1648 aa26.3■■□□□ 1.8
DDX11-222ENST00000542777 POGZQ7Z3K3 1410 aa26.3■■□□□ 1.8
DDX11-222ENST00000542777 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
DDX11-222ENST00000542777 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
DDX11-222ENST00000542777 CLIP1P30622 1438 aa26.27■■□□□ 1.8
DDX11-222ENST00000542777 SIGLEC1Q9BZZ2 1709 aa26.25■■□□□ 1.79
DDX11-222ENST00000542777 MLECQ14165 292 aa26.22■■□□□ 1.79
DDX11-222ENST00000542777 ARHGAP5Q13017 1502 aa26.22■■□□□ 1.79
DDX11-222ENST00000542777 CASKIN1Q8WXD9 1431 aa26.21■■□□□ 1.79
DDX11-222ENST00000542777 ATP10AO60312 1499 aa26.2■■□□□ 1.78
DDX11-222ENST00000542777 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
DDX11-222ENST00000542777 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.78
DDX11-222ENST00000542777 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
DDX11-222ENST00000542777 ZNF518AQ6AHZ1 1483 aa26.17■■□□□ 1.78
DDX11-222ENST00000542777 LMTK3Q96Q04 1460 aa26.17■■□□□ 1.78
DDX11-222ENST00000542777 C9orf84Q5VXU9 1444 aa26.16■■□□□ 1.78
DDX11-222ENST00000542777 AFAP1Q8N556 730 aa26.16■■□□□ 1.78
DDX11-222ENST00000542777 CDC42BPBQ9Y5S2 1711 aa26.15■■□□□ 1.78
DDX11-222ENST00000542777 FER1L4A9Z1Z3 1794 aa26.13■■□□□ 1.77
DDX11-222ENST00000542777 MYT1LQ9UL68 1186 aa26.13■■□□□ 1.77
DDX11-222ENST00000542777 KDM5CP41229 1560 aa26.12■■□□□ 1.77
DDX11-222ENST00000542777 PREX2Q70Z35 1606 aa26.1■■□□□ 1.77
DDX11-222ENST00000542777 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
DDX11-222ENST00000542777 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
DDX11-222ENST00000542777 HSPA2P54652 639 aa26.07■■□□□ 1.76
DDX11-222ENST00000542777 CDC42BPAQ5VT25 1732 aa26.03■■□□□ 1.76
DDX11-222ENST00000542777 TRAPPC8Q9Y2L5 1435 aa26.03■■□□□ 1.76
DDX11-222ENST00000542777 MLH3Q9UHC1 1453 aa26.03■■□□□ 1.76
DDX11-222ENST00000542777 ABCC1P33527 1531 aa26.03■■□□□ 1.76
DDX11-222ENST00000542777 DIP2CQ9Y2E4 1556 aa26.03■■□□□ 1.76
DDX11-222ENST00000542777 FBXO41Q8TF61 875 aa26.01■■□□□ 1.75
DDX11-222ENST00000542777 ITSN2Q9NZM3 1697 aa26.01■■□□□ 1.75
DDX11-222ENST00000542777 CEBPAP49715 358 aaPredicted RBP26■■□□□ 1.75
DDX11-222ENST00000542777 ABCA6Q8N139 1617 aa25.99■■□□□ 1.75
DDX11-222ENST00000542777 REREQ9P2R6 1566 aa25.99■■□□□ 1.75
DDX11-222ENST00000542777 ZNF777Q9ULD5 760 aaPredicted RBP25.97■■□□□ 1.75
DDX11-222ENST00000542777 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
DDX11-222ENST00000542777 KIDINS220Q9ULH0 1771 aa25.92■■□□□ 1.74
DDX11-222ENST00000542777 PREX1Q8TCU6 1659 aa25.92■■□□□ 1.74
DDX11-222ENST00000542777 AGLP35573 1532 aa25.91■■□□□ 1.74
DDX11-222ENST00000542777 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
DDX11-222ENST00000542777 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
DDX11-222ENST00000542777 ESF1Q9H501 851 aaKnown RBP25.89■■□□□ 1.74
DDX11-222ENST00000542777 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
DDX11-222ENST00000542777 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
DDX11-222ENST00000542777 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
DDX11-222ENST00000542777 SYCP2Q9BX26 1530 aa25.87■■□□□ 1.73
DDX11-222ENST00000542777 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
DDX11-222ENST00000542777 SPAG9O60271 1321 aaKnown RBP25.85■■□□□ 1.73
DDX11-222ENST00000542777 UHRF1BP1Q6BDS2 1440 aa25.83■■□□□ 1.73
DDX11-222ENST00000542777 C3P01024 1663 aa25.83■■□□□ 1.73
DDX11-222ENST00000542777 KIAA1107Q9UPP5 1409 aa25.82■■□□□ 1.72
DDX11-222ENST00000542777 PLEKHH2Q8IVE3 1493 aa25.82■■□□□ 1.72
DDX11-222ENST00000542777 CEP162Q5TB80 1403 aa25.78■■□□□ 1.72
DDX11-222ENST00000542777 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
DDX11-222ENST00000542777 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
DDX11-222ENST00000542777 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
DDX11-222ENST00000542777 SUPT6HQ7KZ85 1726 aaKnown RBP25.76■■□□□ 1.71
DDX11-222ENST00000542777 STRCQ7RTU9 1775 aa25.75■■□□□ 1.71
DDX11-222ENST00000542777 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
DDX11-222ENST00000542777 EHBP1L1Q8N3D4 1523 aa25.74■■□□□ 1.71
DDX11-222ENST00000542777 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
DDX11-222ENST00000542777 INO80Q9ULG1 1556 aaPredicted RBP25.73■■□□□ 1.71
DDX11-222ENST00000542777 ZNF644Q9H582 1327 aaPredicted RBP25.72■■□□□ 1.71
DDX11-222ENST00000542777 A2MP01023 1474 aa25.71■■□□□ 1.71
DDX11-222ENST00000542777 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
DDX11-222ENST00000542777 ZMYM3Q14202 1370 aa25.69■■□□□ 1.7
DDX11-222ENST00000542777 PLXNC1O60486 1568 aa25.68■■□□□ 1.7
DDX11-222ENST00000542777 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
DDX11-222ENST00000542777 GGT6Q6P531 493 aa25.65■■□□□ 1.7
DDX11-222ENST00000542777 NPATQ14207 1427 aa25.64■■□□□ 1.7
DDX11-222ENST00000542777 CLTCQ00610 1675 aaKnown RBP25.64■■□□□ 1.69
DDX11-222ENST00000542777 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.69
DDX11-222ENST00000542777 PTPRTO14522 1441 aa25.62■■□□□ 1.69
DDX11-222ENST00000542777 RTEL1-TNFRSF6BF6WH68 1400 aa25.61■■□□□ 1.69
DDX11-222ENST00000542777 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
DDX11-222ENST00000542777 PPP6R1Q9UPN7 881 aa25.59■■□□□ 1.69
DDX11-222ENST00000542777 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
DDX11-222ENST00000542777 NCOA1Q15788 1441 aa25.57■■□□□ 1.68
DDX11-222ENST00000542777 DHX29Q7Z478 1369 aaKnown RBP25.56■■□□□ 1.68
DDX11-222ENST00000542777 CAMSAP2Q08AD1 1489 aa25.54■■□□□ 1.68
DDX11-222ENST00000542777 RSPH4AQ5TD94 716 aa25.54■■□□□ 1.68
DDX11-222ENST00000542777 CAMSAP1Q5T5Y3 1602 aa25.54■■□□□ 1.68
DDX11-222ENST00000542777 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
DDX11-222ENST00000542777 CCDC141Q6ZP82 1450 aa25.53■■□□□ 1.68
DDX11-222ENST00000542777 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
DDX11-222ENST00000542777 MYO3AQ8NEV4 1616 aa25.49■■□□□ 1.67
DDX11-222ENST00000542777 KIF3BO15066 747 aa25.49■■□□□ 1.67
DDX11-222ENST00000542777 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
DDX11-222ENST00000542777 ZNF142P52746 1687 aaPredicted RBP25.48■■□□□ 1.67
DDX11-222ENST00000542777 LRRC9Q6ZRR7 1453 aa25.47■■□□□ 1.67
DDX11-222ENST00000542777 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
DDX11-222ENST00000542777 LTBP4Q8N2S1 1624 aa25.45■■□□□ 1.67
DDX11-222ENST00000542777 TSPY4P0CV99 314 aa25.45■■□□□ 1.66
DDX11-222ENST00000542777 TSPY10P0CW01 314 aa25.45■■□□□ 1.66
DDX11-222ENST00000542777 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
DDX11-222ENST00000542777 PKD2Q13563 968 aa25.42■■□□□ 1.66
DDX11-222ENST00000542777 PLA2R1Q13018 1463 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms