RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
CHFR-221ENST00000542714 ITGAEP38570 1179 aa20.05■□□□□ 0.8
CHFR-221ENST00000542714 ZNF644Q9H582 1327 aaPredicted RBP20.04■□□□□ 0.8
CHFR-221ENST00000542714 CROCC2H7BZ55 1655 aa20.04■□□□□ 0.8
CHFR-221ENST00000542714 NPM1P06748 294 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHFR-221ENST00000542714 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
CHFR-221ENST00000542714 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
CHFR-221ENST00000542714 ARAP3Q8WWN8 1544 aa20.01■□□□□ 0.79
CHFR-221ENST00000542714 PLCH2O75038 1416 aa20■□□□□ 0.79
CHFR-221ENST00000542714 DAPK1P53355 1430 aa20■□□□□ 0.79
CHFR-221ENST00000542714 ABCC5O15440 1437 aa19.99■□□□□ 0.79
CHFR-221ENST00000542714 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
CHFR-221ENST00000542714 ZNF777Q9ULD5 760 aaPredicted RBP19.96■□□□□ 0.79
CHFR-221ENST00000542714 GCC2Q8IWJ2 1684 aa19.96■□□□□ 0.79
CHFR-221ENST00000542714 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
CHFR-221ENST00000542714 MBD5Q9P267 1494 aa19.93■□□□□ 0.78
CHFR-221ENST00000542714 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
CHFR-221ENST00000542714 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
CHFR-221ENST00000542714 ABCC1P33527 1531 aa19.92■□□□□ 0.78
CHFR-221ENST00000542714 AKNAQ7Z591 1439 aa19.92■□□□□ 0.78
CHFR-221ENST00000542714 GLI2P10070 1586 aa19.91■□□□□ 0.78
CHFR-221ENST00000542714 MAP3K4Q9Y6R4 1608 aa19.91■□□□□ 0.78
CHFR-221ENST00000542714 HFM1A2PYH4 1435 aa19.91■□□□□ 0.78
CHFR-221ENST00000542714 SHANK2Q9UPX8 1470 aa19.91■□□□□ 0.78
CHFR-221ENST00000542714 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
CHFR-221ENST00000542714 RAB3GAP2Q9H2M9 1393 aa19.9■□□□□ 0.78
CHFR-221ENST00000542714 PLEKHH2Q8IVE3 1493 aa19.9■□□□□ 0.78
CHFR-221ENST00000542714 ARHGEF12Q9NZN5 1544 aa19.9■□□□□ 0.78
CHFR-221ENST00000542714 NAIPQ13075 1403 aa19.89■□□□□ 0.77
CHFR-221ENST00000542714 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
CHFR-221ENST00000542714 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
CHFR-221ENST00000542714 CCDC141Q6ZP82 1450 aa19.87■□□□□ 0.77
CHFR-221ENST00000542714 ROCK1Q13464 1354 aa19.87■□□□□ 0.77
CHFR-221ENST00000542714 EFCAB2Q5VUJ9 269 aa19.87■□□□□ 0.77
CHFR-221ENST00000542714 MAST1Q9Y2H9 1570 aa19.87■□□□□ 0.77
CHFR-221ENST00000542714 FANCAO15360 1455 aa19.86■□□□□ 0.77
CHFR-221ENST00000542714 CHIC2Q9UKJ5 165 aa19.86■□□□□ 0.77
CHFR-221ENST00000542714 KDM6BO15054 1643 aa19.86■□□□□ 0.77
CHFR-221ENST00000542714 CD109Q6YHK3 1445 aa19.85■□□□□ 0.77
CHFR-221ENST00000542714 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.77
CHFR-221ENST00000542714 CFAP74Q9C0B2 1584 aa19.85■□□□□ 0.77
CHFR-221ENST00000542714 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
CHFR-221ENST00000542714 C9orf84Q5VXU9 1444 aa19.83■□□□□ 0.76
CHFR-221ENST00000542714 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
CHFR-221ENST00000542714 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
CHFR-221ENST00000542714 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
CHFR-221ENST00000542714 TRAPPC8Q9Y2L5 1435 aa19.8■□□□□ 0.76
CHFR-221ENST00000542714 HRCP23327 699 aa19.8■□□□□ 0.76
CHFR-221ENST00000542714 DHX57Q6P158 1386 aaKnown RBP19.79■□□□□ 0.76
CHFR-221ENST00000542714 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
CHFR-221ENST00000542714 ADGRL1O94910 1474 aa19.78■□□□□ 0.76
CHFR-221ENST00000542714 PLXNC1O60486 1568 aa19.78■□□□□ 0.76
CHFR-221ENST00000542714 RSPH4AQ5TD94 716 aa19.77■□□□□ 0.76
CHFR-221ENST00000542714 TSPOAP1O95153 1857 aa19.75■□□□□ 0.75
CHFR-221ENST00000542714 NEO1Q92859 1461 aa19.75■□□□□ 0.75
CHFR-221ENST00000542714 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
CHFR-221ENST00000542714 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
CHFR-221ENST00000542714 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
CHFR-221ENST00000542714 SCAPERQ9BY12 1400 aa19.74■□□□□ 0.75
CHFR-221ENST00000542714 ZFYVE16Q7Z3T8 1539 aa19.73■□□□□ 0.75
CHFR-221ENST00000542714 TSPY4P0CV99 314 aa19.72■□□□□ 0.75
CHFR-221ENST00000542714 TSPY10P0CW01 314 aa19.72■□□□□ 0.75
CHFR-221ENST00000542714 FAM69CQ0P6D2 419 aa19.72■□□□□ 0.75
CHFR-221ENST00000542714 KDM5CP41229 1560 aa19.69■□□□□ 0.74
CHFR-221ENST00000542714 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
CHFR-221ENST00000542714 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
CHFR-221ENST00000542714 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
CHFR-221ENST00000542714 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
CHFR-221ENST00000542714 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
CHFR-221ENST00000542714 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
CHFR-221ENST00000542714 ANKRD50Q9ULJ7 1429 aa19.67■□□□□ 0.74
CHFR-221ENST00000542714 AFAP1Q8N556 730 aa19.66■□□□□ 0.74
CHFR-221ENST00000542714 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
CHFR-221ENST00000542714 FRMPD1Q5SYB0 1578 aa19.65■□□□□ 0.74
CHFR-221ENST00000542714 DUOX2Q9NRD8 1548 aa19.64■□□□□ 0.73
CHFR-221ENST00000542714 TEX14Q8IWB6 1497 aa19.63■□□□□ 0.73
CHFR-221ENST00000542714 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
CHFR-221ENST00000542714 HECW2Q9P2P5 1572 aa19.62■□□□□ 0.73
CHFR-221ENST00000542714 DENND4BO75064 1496 aaPredicted RBP19.62■□□□□ 0.73
CHFR-221ENST00000542714 ZEB1P37275 1124 aaPredicted RBP19.61■□□□□ 0.73
CHFR-221ENST00000542714 UNC13BO14795 1591 aa19.61■□□□□ 0.73
CHFR-221ENST00000542714 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
CHFR-221ENST00000542714 KDM5DQ9BY66 1539 aa19.6■□□□□ 0.73
CHFR-221ENST00000542714 PZPP20742 1482 aa19.59■□□□□ 0.73
CHFR-221ENST00000542714 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
CHFR-221ENST00000542714 ERBINQ96RT1 1412 aa19.58■□□□□ 0.72
CHFR-221ENST00000542714 ABCA6Q8N139 1617 aa19.58■□□□□ 0.72
CHFR-221ENST00000542714 ZMYM4Q5VZL5 1548 aa19.56■□□□□ 0.72
CHFR-221ENST00000542714 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
CHFR-221ENST00000542714 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
CHFR-221ENST00000542714 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
CHFR-221ENST00000542714 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
CHFR-221ENST00000542714 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
CHFR-221ENST00000542714 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
CHFR-221ENST00000542714 DEPDC5O75140 1603 aa19.53■□□□□ 0.72
CHFR-221ENST00000542714 IQGAP3Q86VI3 1631 aa19.51■□□□□ 0.71
CHFR-221ENST00000542714 MPHOSPH9Q99550 1183 aa19.5■□□□□ 0.71
CHFR-221ENST00000542714 COL17A1Q9UMD9 1497 aaPredicted RBP19.49■□□□□ 0.71
CHFR-221ENST00000542714 BCORL1Q5H9F3 1711 aa19.49■□□□□ 0.71
CHFR-221ENST00000542714 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms