RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 MAP3K1Q13233 1512 aa24.41■■□□□ 1.5
SPTB-205ENST00000542694 SCAPERQ9BY12 1400 aa24.41■■□□□ 1.5
SPTB-205ENST00000542694 CFDP1Q9UEE9 299 aaPredicted RBP24.38■■□□□ 1.49
SPTB-205ENST00000542694 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
SPTB-205ENST00000542694 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
SPTB-205ENST00000542694 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
SPTB-205ENST00000542694 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
SPTB-205ENST00000542694 CDC42BPBQ9Y5S2 1711 aa24.34■■□□□ 1.49
SPTB-205ENST00000542694 MAGI2Q86UL8 1455 aa24.32■■□□□ 1.48
SPTB-205ENST00000542694 ZNF777Q9ULD5 760 aaPredicted RBP24.32■■□□□ 1.48
SPTB-205ENST00000542694 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
SPTB-205ENST00000542694 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
SPTB-205ENST00000542694 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
SPTB-205ENST00000542694 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
SPTB-205ENST00000542694 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
SPTB-205ENST00000542694 ZNF518AQ6AHZ1 1483 aa24.3■■□□□ 1.48
SPTB-205ENST00000542694 PLEKHH2Q8IVE3 1493 aa24.3■■□□□ 1.48
SPTB-205ENST00000542694 ZMYM4Q5VZL5 1548 aa24.27■■□□□ 1.48
SPTB-205ENST00000542694 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
SPTB-205ENST00000542694 FRMPD1Q5SYB0 1578 aa24.27■■□□□ 1.48
SPTB-205ENST00000542694 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
SPTB-205ENST00000542694 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
SPTB-205ENST00000542694 KIAA1107Q9UPP5 1409 aa24.26■■□□□ 1.47
SPTB-205ENST00000542694 KANK4Q5T7N3 995 aaPredicted RBP24.25■■□□□ 1.47
SPTB-205ENST00000542694 ITSN2Q9NZM3 1697 aa24.24■■□□□ 1.47
SPTB-205ENST00000542694 ABCC1P33527 1531 aa24.22■■□□□ 1.47
SPTB-205ENST00000542694 RSPH4AQ5TD94 716 aa24.22■■□□□ 1.47
SPTB-205ENST00000542694 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
SPTB-205ENST00000542694 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
SPTB-205ENST00000542694 ZFYVE16Q7Z3T8 1539 aa24.2■■□□□ 1.47
SPTB-205ENST00000542694 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
SPTB-205ENST00000542694 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
SPTB-205ENST00000542694 MLH3Q9UHC1 1453 aa24.17■■□□□ 1.46
SPTB-205ENST00000542694 TRAPPC8Q9Y2L5 1435 aa24.17■■□□□ 1.46
SPTB-205ENST00000542694 KDM5CP41229 1560 aa24.16■■□□□ 1.46
SPTB-205ENST00000542694 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
SPTB-205ENST00000542694 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
SPTB-205ENST00000542694 ATP10AO60312 1499 aa24.16■■□□□ 1.46
SPTB-205ENST00000542694 SPAG9O60271 1321 aaKnown RBP24.15■■□□□ 1.46
SPTB-205ENST00000542694 YEATS2Q9ULM3 1422 aa24.13■■□□□ 1.45
SPTB-205ENST00000542694 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
SPTB-205ENST00000542694 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
SPTB-205ENST00000542694 HECW2Q9P2P5 1572 aa24.12■■□□□ 1.45
SPTB-205ENST00000542694 ZNF644Q9H582 1327 aaPredicted RBP24.11■■□□□ 1.45
SPTB-205ENST00000542694 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
SPTB-205ENST00000542694 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
SPTB-205ENST00000542694 TSPY4P0CV99 314 aa24.08■■□□□ 1.45
SPTB-205ENST00000542694 TSPY10P0CW01 314 aa24.08■■□□□ 1.45
SPTB-205ENST00000542694 CAMSAP2Q08AD1 1489 aa24.06■■□□□ 1.44
SPTB-205ENST00000542694 MBD5Q9P267 1494 aa24.06■■□□□ 1.44
SPTB-205ENST00000542694 RTEL1-TNFRSF6BF6WH68 1400 aa24.03■■□□□ 1.44
SPTB-205ENST00000542694 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
SPTB-205ENST00000542694 REREQ9P2R6 1566 aa24.01■■□□□ 1.43
SPTB-205ENST00000542694 KIDINS220Q9ULH0 1771 aa24.01■■□□□ 1.43
SPTB-205ENST00000542694 DIP2CQ9Y2E4 1556 aa23.99■■□□□ 1.43
SPTB-205ENST00000542694 BCORL1Q5H9F3 1711 aa23.99■■□□□ 1.43
SPTB-205ENST00000542694 ATP7AQ04656 1500 aa23.99■■□□□ 1.43
SPTB-205ENST00000542694 ARHGEF5Q12774 1597 aa23.98■■□□□ 1.43
SPTB-205ENST00000542694 ADAMTSL3P82987 1691 aa23.97■■□□□ 1.43
SPTB-205ENST00000542694 MLECQ14165 292 aa23.97■■□□□ 1.43
SPTB-205ENST00000542694 AGLP35573 1532 aa23.96■■□□□ 1.43
SPTB-205ENST00000542694 ABCA6Q8N139 1617 aa23.95■■□□□ 1.43
SPTB-205ENST00000542694 ESF1Q9H501 851 aaKnown RBP23.95■■□□□ 1.42
SPTB-205ENST00000542694 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
SPTB-205ENST00000542694 INO80Q9ULG1 1556 aaPredicted RBP23.94■■□□□ 1.42
SPTB-205ENST00000542694 A2MP01023 1474 aa23.92■■□□□ 1.42
SPTB-205ENST00000542694 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
SPTB-205ENST00000542694 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
SPTB-205ENST00000542694 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
SPTB-205ENST00000542694 PTPRMP28827 1452 aa23.88■■□□□ 1.41
SPTB-205ENST00000542694 TCOF1Q13428 1488 aaKnown RBP23.88■■□□□ 1.41
SPTB-205ENST00000542694 ADGBQ8N7X0 1667 aa23.88■■□□□ 1.41
SPTB-205ENST00000542694 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
SPTB-205ENST00000542694 MADDQ8WXG6 1647 aa23.85■■□□□ 1.41
SPTB-205ENST00000542694 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
SPTB-205ENST00000542694 MAST1Q9Y2H9 1570 aa23.83■■□□□ 1.41
SPTB-205ENST00000542694 CNTLNQ9NXG0 1405 aa23.82■■□□□ 1.4
SPTB-205ENST00000542694 GGT6Q6P531 493 aa23.81■■□□□ 1.4
SPTB-205ENST00000542694 ABCC5O15440 1437 aa23.81■■□□□ 1.4
SPTB-205ENST00000542694 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
SPTB-205ENST00000542694 FER1L4A9Z1Z3 1794 aa23.8■■□□□ 1.4
SPTB-205ENST00000542694 PLXNC1O60486 1568 aa23.8■■□□□ 1.4
SPTB-205ENST00000542694 DAPK1P53355 1430 aa23.8■■□□□ 1.4
SPTB-205ENST00000542694 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
SPTB-205ENST00000542694 RIMS1Q86UR5 1692 aaKnown RBP23.79■■□□□ 1.4
SPTB-205ENST00000542694 KIF3BO15066 747 aa23.79■■□□□ 1.4
SPTB-205ENST00000542694 DNMT1P26358 1616 aaKnown RBP23.77■■□□□ 1.4
SPTB-205ENST00000542694 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
SPTB-205ENST00000542694 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.39
SPTB-205ENST00000542694 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
SPTB-205ENST00000542694 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
SPTB-205ENST00000542694 CHIC2Q9UKJ5 165 aa23.72■■□□□ 1.39
SPTB-205ENST00000542694 KIF15Q9NS87 1388 aa23.72■■□□□ 1.39
SPTB-205ENST00000542694 DUOX2Q9NRD8 1548 aa23.72■■□□□ 1.39
SPTB-205ENST00000542694 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
SPTB-205ENST00000542694 CROCC2H7BZ55 1655 aa23.7■■□□□ 1.39
SPTB-205ENST00000542694 ZMYM3Q14202 1370 aa23.68■■□□□ 1.38
SPTB-205ENST00000542694 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
SPTB-205ENST00000542694 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
SPTB-205ENST00000542694 FAM135AQ9P2D6 1515 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms