RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
C2CD3-217ENST00000542452 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
C2CD3-217ENST00000542452 ARHGEF40Q8TER5 1519 aa18.51■□□□□ 0.55
C2CD3-217ENST00000542452 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
C2CD3-217ENST00000542452 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
C2CD3-217ENST00000542452 ITSN2Q9NZM3 1697 aa18.48■□□□□ 0.55
C2CD3-217ENST00000542452 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
C2CD3-217ENST00000542452 ABCC1P33527 1531 aa18.48■□□□□ 0.55
C2CD3-217ENST00000542452 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
C2CD3-217ENST00000542452 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
C2CD3-217ENST00000542452 SAMD9LQ8IVG5 1584 aa18.46■□□□□ 0.55
C2CD3-217ENST00000542452 GPATCH8Q9UKJ3 1502 aaKnown RBP18.45■□□□□ 0.54
C2CD3-217ENST00000542452 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
C2CD3-217ENST00000542452 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
C2CD3-217ENST00000542452 KDM5CP41229 1560 aa18.44■□□□□ 0.54
C2CD3-217ENST00000542452 ZFYVE16Q7Z3T8 1539 aa18.43■□□□□ 0.54
C2CD3-217ENST00000542452 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
C2CD3-217ENST00000542452 EFCAB2Q5VUJ9 269 aa18.42■□□□□ 0.54
C2CD3-217ENST00000542452 SUPT6HQ7KZ85 1726 aaKnown RBP18.41■□□□□ 0.54
C2CD3-217ENST00000542452 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
C2CD3-217ENST00000542452 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
C2CD3-217ENST00000542452 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
C2CD3-217ENST00000542452 ZNF518AQ6AHZ1 1483 aa18.38■□□□□ 0.53
C2CD3-217ENST00000542452 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
C2CD3-217ENST00000542452 BCORL1Q5H9F3 1711 aa18.37■□□□□ 0.53
C2CD3-217ENST00000542452 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
C2CD3-217ENST00000542452 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
C2CD3-217ENST00000542452 LRRC9Q6ZRR7 1453 aa18.37■□□□□ 0.53
C2CD3-217ENST00000542452 MAGI2Q86UL8 1455 aa18.37■□□□□ 0.53
C2CD3-217ENST00000542452 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
C2CD3-217ENST00000542452 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
C2CD3-217ENST00000542452 CCNB3Q8WWL7 1395 aa18.36■□□□□ 0.53
C2CD3-217ENST00000542452 DIP2CQ9Y2E4 1556 aa18.35■□□□□ 0.53
C2CD3-217ENST00000542452 KIDINS220Q9ULH0 1771 aa18.33■□□□□ 0.53
C2CD3-217ENST00000542452 MADDQ8WXG6 1647 aa18.32■□□□□ 0.52
C2CD3-217ENST00000542452 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
C2CD3-217ENST00000542452 KANK4Q5T7N3 995 aaPredicted RBP18.3■□□□□ 0.52
C2CD3-217ENST00000542452 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
C2CD3-217ENST00000542452 INO80Q9ULG1 1556 aaPredicted RBP18.3■□□□□ 0.52
C2CD3-217ENST00000542452 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
C2CD3-217ENST00000542452 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
C2CD3-217ENST00000542452 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
C2CD3-217ENST00000542452 ATP10AO60312 1499 aa18.27■□□□□ 0.52
C2CD3-217ENST00000542452 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
C2CD3-217ENST00000542452 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
C2CD3-217ENST00000542452 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
C2CD3-217ENST00000542452 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
C2CD3-217ENST00000542452 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
C2CD3-217ENST00000542452 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
C2CD3-217ENST00000542452 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
C2CD3-217ENST00000542452 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
C2CD3-217ENST00000542452 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
C2CD3-217ENST00000542452 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
C2CD3-217ENST00000542452 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
C2CD3-217ENST00000542452 PTPRMP28827 1452 aa18.2■□□□□ 0.5
C2CD3-217ENST00000542452 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
C2CD3-217ENST00000542452 ADGBQ8N7X0 1667 aa18.19■□□□□ 0.5
C2CD3-217ENST00000542452 ARHGEF5Q12774 1597 aa18.19■□□□□ 0.5
C2CD3-217ENST00000542452 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
C2CD3-217ENST00000542452 AGLP35573 1532 aa18.18■□□□□ 0.5
C2CD3-217ENST00000542452 CCDC141Q6ZP82 1450 aa18.17■□□□□ 0.5
C2CD3-217ENST00000542452 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
C2CD3-217ENST00000542452 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
C2CD3-217ENST00000542452 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
C2CD3-217ENST00000542452 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
C2CD3-217ENST00000542452 MLECQ14165 292 aa18.13■□□□□ 0.49
C2CD3-217ENST00000542452 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
C2CD3-217ENST00000542452 A2MP01023 1474 aa18.11■□□□□ 0.49
C2CD3-217ENST00000542452 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
C2CD3-217ENST00000542452 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
C2CD3-217ENST00000542452 APLP2Q06481 763 aa18.1■□□□□ 0.49
C2CD3-217ENST00000542452 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
C2CD3-217ENST00000542452 FGD6Q6ZV73 1430 aa18.08■□□□□ 0.49
C2CD3-217ENST00000542452 C3P01024 1663 aa18.06■□□□□ 0.48
C2CD3-217ENST00000542452 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
C2CD3-217ENST00000542452 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
C2CD3-217ENST00000542452 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
C2CD3-217ENST00000542452 LMTK3Q96Q04 1460 aa18.02■□□□□ 0.48
C2CD3-217ENST00000542452 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
C2CD3-217ENST00000542452 ABCC5O15440 1437 aa18.01■□□□□ 0.47
C2CD3-217ENST00000542452 DAPK1P53355 1430 aa18■□□□□ 0.47
C2CD3-217ENST00000542452 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
C2CD3-217ENST00000542452 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
C2CD3-217ENST00000542452 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
C2CD3-217ENST00000542452 PREX1Q8TCU6 1659 aa17.99■□□□□ 0.47
C2CD3-217ENST00000542452 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
C2CD3-217ENST00000542452 CEBPAP49715 358 aaPredicted RBP17.97■□□□□ 0.47
C2CD3-217ENST00000542452 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
C2CD3-217ENST00000542452 MROH1Q8NDA8 1641 aa17.96■□□□□ 0.47
C2CD3-217ENST00000542452 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
C2CD3-217ENST00000542452 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
C2CD3-217ENST00000542452 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
C2CD3-217ENST00000542452 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
C2CD3-217ENST00000542452 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
C2CD3-217ENST00000542452 KDM5DQ9BY66 1539 aa17.92■□□□□ 0.46
C2CD3-217ENST00000542452 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
C2CD3-217ENST00000542452 GGT6Q6P531 493 aa17.9■□□□□ 0.46
C2CD3-217ENST00000542452 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
C2CD3-217ENST00000542452 KIF15Q9NS87 1388 aa17.89■□□□□ 0.45
C2CD3-217ENST00000542452 CEP152O94986 1710 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms