RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 POGZQ7Z3K3 1410 aa32.6■■■□□ 2.81
DDX11-220ENST00000542244 ZFYVE16Q7Z3T8 1539 aa32.6■■■□□ 2.81
DDX11-220ENST00000542244 CDK11AQ9UQ88 783 aaPredicted RBP32.59■■■□□ 2.81
DDX11-220ENST00000542244 MYO5CQ9NQX4 1742 aa32.58■■■□□ 2.81
DDX11-220ENST00000542244 ILDR1Q86SU0 546 aaPredicted RBP32.57■■■□□ 2.8
DDX11-220ENST00000542244 EFCAB2Q5VUJ9 269 aa32.56■■■□□ 2.8
DDX11-220ENST00000542244 CASKIN1Q8WXD9 1431 aa32.55■■■□□ 2.8
DDX11-220ENST00000542244 RIMS1Q86UR5 1692 aaKnown RBP32.53■■■□□ 2.8
DDX11-220ENST00000542244 MAGI2Q86UL8 1455 aa32.51■■■□□ 2.79
DDX11-220ENST00000542244 MLECQ14165 292 aa32.5■■■□□ 2.79
DDX11-220ENST00000542244 ARHGAP5Q13017 1502 aa32.5■■■□□ 2.79
DDX11-220ENST00000542244 CLIP1P30622 1438 aa32.49■■■□□ 2.79
DDX11-220ENST00000542244 PLPPR3Q6T4P5 718 aa32.48■■■□□ 2.79
DDX11-220ENST00000542244 AFAP1Q8N556 730 aa32.48■■■□□ 2.79
DDX11-220ENST00000542244 CDC42BPBQ9Y5S2 1711 aa32.45■■■□□ 2.78
DDX11-220ENST00000542244 ATP10AO60312 1499 aa32.42■■■□□ 2.78
DDX11-220ENST00000542244 CCDC18Q5T9S5 1454 aa32.42■■■□□ 2.78
DDX11-220ENST00000542244 LMTK3Q96Q04 1460 aa32.41■■■□□ 2.78
DDX11-220ENST00000542244 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
DDX11-220ENST00000542244 FYCO1Q9BQS8 1478 aa32.38■■■□□ 2.77
DDX11-220ENST00000542244 KDM5CP41229 1560 aa32.37■■■□□ 2.77
DDX11-220ENST00000542244 ZNF518AQ6AHZ1 1483 aa32.36■■■□□ 2.77
DDX11-220ENST00000542244 TRAPPC8Q9Y2L5 1435 aa32.36■■■□□ 2.77
DDX11-220ENST00000542244 PREX2Q70Z35 1606 aa32.36■■■□□ 2.77
DDX11-220ENST00000542244 C9orf84Q5VXU9 1444 aa32.35■■■□□ 2.77
DDX11-220ENST00000542244 HSPA2P54652 639 aa32.31■■■□□ 2.76
DDX11-220ENST00000542244 ABCC1P33527 1531 aa32.31■■■□□ 2.76
DDX11-220ENST00000542244 CDC42BPAQ5VT25 1732 aa32.3■■■□□ 2.76
DDX11-220ENST00000542244 DIP2CQ9Y2E4 1556 aa32.3■■■□□ 2.76
DDX11-220ENST00000542244 FER1L4A9Z1Z3 1794 aa32.3■■■□□ 2.76
DDX11-220ENST00000542244 MYT1LQ9UL68 1186 aa32.27■■■□□ 2.76
DDX11-220ENST00000542244 ABCA6Q8N139 1617 aa32.26■■■□□ 2.76
DDX11-220ENST00000542244 CEBPAP49715 358 aaPredicted RBP32.26■■■□□ 2.75
DDX11-220ENST00000542244 ITSN2Q9NZM3 1697 aa32.25■■■□□ 2.75
DDX11-220ENST00000542244 MLH3Q9UHC1 1453 aa32.23■■■□□ 2.75
DDX11-220ENST00000542244 GPATCH8Q9UKJ3 1502 aaKnown RBP32.23■■■□□ 2.75
DDX11-220ENST00000542244 ZNF777Q9ULD5 760 aaPredicted RBP32.22■■■□□ 2.75
DDX11-220ENST00000542244 SAMD9LQ8IVG5 1584 aa32.2■■■□□ 2.75
DDX11-220ENST00000542244 KIDINS220Q9ULH0 1771 aa32.16■■■□□ 2.74
DDX11-220ENST00000542244 HNRNPMP52272 730 aaKnown RBP eCLIP32.15■■■□□ 2.74
DDX11-220ENST00000542244 REREQ9P2R6 1566 aa32.15■■■□□ 2.74
DDX11-220ENST00000542244 SYCP2Q9BX26 1530 aa32.14■■■□□ 2.74
DDX11-220ENST00000542244 CEP162Q5TB80 1403 aa32.12■■■□□ 2.73
DDX11-220ENST00000542244 MTUS2Q5JR59 1369 aa32.07■■■□□ 2.73
DDX11-220ENST00000542244 AGLP35573 1532 aa32.06■■■□□ 2.72
DDX11-220ENST00000542244 CFDP1Q9UEE9 299 aaPredicted RBP32.06■■■□□ 2.72
DDX11-220ENST00000542244 CCNB3Q8WWL7 1395 aa32.06■■■□□ 2.72
DDX11-220ENST00000542244 ZNF644Q9H582 1327 aaPredicted RBP32.05■■■□□ 2.72
DDX11-220ENST00000542244 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
DDX11-220ENST00000542244 SPAG9O60271 1321 aaKnown RBP32.01■■■□□ 2.72
DDX11-220ENST00000542244 TIAM1Q13009 1591 aa32.01■■■□□ 2.71
DDX11-220ENST00000542244 PREX1Q8TCU6 1659 aa31.99■■■□□ 2.71
DDX11-220ENST00000542244 C3P01024 1663 aa31.99■■■□□ 2.71
DDX11-220ENST00000542244 FBXO41Q8TF61 875 aa31.98■■■□□ 2.71
DDX11-220ENST00000542244 KIAA1107Q9UPP5 1409 aa31.98■■■□□ 2.71
DDX11-220ENST00000542244 EHBP1L1Q8N3D4 1523 aa31.95■■■□□ 2.71
DDX11-220ENST00000542244 ATP7AQ04656 1500 aa31.95■■■□□ 2.7
DDX11-220ENST00000542244 INO80Q9ULG1 1556 aaPredicted RBP31.94■■■□□ 2.7
DDX11-220ENST00000542244 SUPT6HQ7KZ85 1726 aaKnown RBP31.92■■■□□ 2.7
DDX11-220ENST00000542244 PLEKHH2Q8IVE3 1493 aa31.91■■■□□ 2.7
DDX11-220ENST00000542244 MBD5Q9P267 1494 aa31.91■■■□□ 2.7
DDX11-220ENST00000542244 UHRF1BP1Q6BDS2 1440 aa31.89■■■□□ 2.7
DDX11-220ENST00000542244 STRCQ7RTU9 1775 aa31.87■■■□□ 2.69
DDX11-220ENST00000542244 ESF1Q9H501 851 aaKnown RBP31.87■■■□□ 2.69
DDX11-220ENST00000542244 PLXNC1O60486 1568 aa31.86■■■□□ 2.69
DDX11-220ENST00000542244 A2MP01023 1474 aa31.86■■■□□ 2.69
DDX11-220ENST00000542244 NCOA2Q15596 1464 aa31.84■■■□□ 2.69
DDX11-220ENST00000542244 CNTLNQ9NXG0 1405 aa31.81■■■□□ 2.68
DDX11-220ENST00000542244 ZMYM3Q14202 1370 aa31.8■■■□□ 2.68
DDX11-220ENST00000542244 SETD1BQ9UPS6 1966 aaKnown RBP31.79■■■□□ 2.68
DDX11-220ENST00000542244 GGT6Q6P531 493 aa31.78■■■□□ 2.68
DDX11-220ENST00000542244 CERKQ8TCT0 537 aa31.77■■■□□ 2.68
DDX11-220ENST00000542244 CLTCQ00610 1675 aaKnown RBP31.76■■■□□ 2.68
DDX11-220ENST00000542244 VPS8Q8N3P4 1428 aa31.75■■■□□ 2.67
DDX11-220ENST00000542244 CAMSAP2Q08AD1 1489 aa31.74■■■□□ 2.67
DDX11-220ENST00000542244 MROH2AA6NES4 1674 aa31.73■■■□□ 2.67
DDX11-220ENST00000542244 KANK4Q5T7N3 995 aaPredicted RBP31.72■■■□□ 2.67
DDX11-220ENST00000542244 ADGBQ8N7X0 1667 aa31.71■■■□□ 2.67
DDX11-220ENST00000542244 RTEL1-TNFRSF6BF6WH68 1400 aa31.69■■■□□ 2.66
DDX11-220ENST00000542244 LRRC9Q6ZRR7 1453 aa31.69■■■□□ 2.66
DDX11-220ENST00000542244 NPATQ14207 1427 aa31.68■■■□□ 2.66
DDX11-220ENST00000542244 PTPRKQ15262 1439 aa31.66■■■□□ 2.66
DDX11-220ENST00000542244 CCDC141Q6ZP82 1450 aa31.66■■■□□ 2.66
DDX11-220ENST00000542244 DHX29Q7Z478 1369 aaKnown RBP31.66■■■□□ 2.66
DDX11-220ENST00000542244 NCOA1Q15788 1441 aa31.65■■■□□ 2.66
DDX11-220ENST00000542244 DMRT2Q9Y5R5 561 aa31.63■■■□□ 2.65
DDX11-220ENST00000542244 PTPRTO14522 1441 aa31.61■■■□□ 2.65
DDX11-220ENST00000542244 CAMSAP1Q5T5Y3 1602 aa31.6■■■□□ 2.65
DDX11-220ENST00000542244 KIF3BO15066 747 aa31.59■■■□□ 2.65
DDX11-220ENST00000542244 NCKAP5LQ9HCH0 1330 aa31.58■■■□□ 2.65
DDX11-220ENST00000542244 MYO3AQ8NEV4 1616 aa31.57■■■□□ 2.64
DDX11-220ENST00000542244 ARHGEF5Q12774 1597 aa31.56■■■□□ 2.64
DDX11-220ENST00000542244 FBXO31Q5XUX0 539 aaPredicted RBP31.54■■■□□ 2.64
DDX11-220ENST00000542244 PPP6R1Q9UPN7 881 aa31.53■■■□□ 2.64
DDX11-220ENST00000542244 RSPH4AQ5TD94 716 aa31.52■■■□□ 2.64
DDX11-220ENST00000542244 LTBP4Q8N2S1 1624 aa31.51■■■□□ 2.63
DDX11-220ENST00000542244 CEP170BQ9Y4F5 1589 aaPredicted RBP31.51■■■□□ 2.63
DDX11-220ENST00000542244 MAP3K1Q13233 1512 aa31.5■■■□□ 2.63
DDX11-220ENST00000542244 ZNF142P52746 1687 aaPredicted RBP31.5■■■□□ 2.63
DDX11-220ENST00000542244 TSPY4P0CV99 314 aa31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms