RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 UHRF1BP1LA0JNW5 1464 aa14.16□□□□□ -0.14
LDHA-220ENST00000542179 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
LDHA-220ENST00000542179 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
LDHA-220ENST00000542179 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
LDHA-220ENST00000542179 ABCC2Q92887 1545 aa14.14□□□□□ -0.15
LDHA-220ENST00000542179 ATP10BO94823 1461 aa14.13□□□□□ -0.15
LDHA-220ENST00000542179 RRBP1Q9P2E9 1410 aaKnown RBP14.13□□□□□ -0.15
LDHA-220ENST00000542179 SUPT6HQ7KZ85 1726 aaKnown RBP14.12□□□□□ -0.15
LDHA-220ENST00000542179 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
LDHA-220ENST00000542179 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
LDHA-220ENST00000542179 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
LDHA-220ENST00000542179 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
LDHA-220ENST00000542179 NCOA2Q15596 1464 aa14.1□□□□□ -0.15
LDHA-220ENST00000542179 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
LDHA-220ENST00000542179 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
LDHA-220ENST00000542179 ARID3CA6NKF2 412 aa14.08□□□□□ -0.16
LDHA-220ENST00000542179 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
LDHA-220ENST00000542179 CHRDL2Q6WN34 429 aa14.08□□□□□ -0.16
LDHA-220ENST00000542179 KDM5BQ9UGL1 1544 aa14.08□□□□□ -0.16
LDHA-220ENST00000542179 PLEKHD1A6NEE1 506 aa14.07□□□□□ -0.16
LDHA-220ENST00000542179 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
LDHA-220ENST00000542179 ADCY10Q96PN6 1610 aa14.06□□□□□ -0.16
LDHA-220ENST00000542179 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
LDHA-220ENST00000542179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
LDHA-220ENST00000542179 MYOM3Q5VTT5 1437 aa14.04□□□□□ -0.16
LDHA-220ENST00000542179 ZCCHC11Q5TAX3 1644 aaKnown RBP14.02□□□□□ -0.16
LDHA-220ENST00000542179 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
LDHA-220ENST00000542179 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
LDHA-220ENST00000542179 KIF14Q15058 1648 aa13.99□□□□□ -0.17
LDHA-220ENST00000542179 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
LDHA-220ENST00000542179 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
LDHA-220ENST00000542179 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
LDHA-220ENST00000542179 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
LDHA-220ENST00000542179 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
LDHA-220ENST00000542179 TCOF1Q13428 1488 aaKnown RBP13.98□□□□□ -0.17
LDHA-220ENST00000542179 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
LDHA-220ENST00000542179 ITSN2Q9NZM3 1697 aa13.95□□□□□ -0.18
LDHA-220ENST00000542179 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
LDHA-220ENST00000542179 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
LDHA-220ENST00000542179 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
LDHA-220ENST00000542179 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
LDHA-220ENST00000542179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.91□□□□□ -0.189e-20■□□□□ 9.6
LDHA-220ENST00000542179 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
LDHA-220ENST00000542179 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
LDHA-220ENST00000542179 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
LDHA-220ENST00000542179 ASXL2Q76L83 1435 aa13.9□□□□□ -0.19
LDHA-220ENST00000542179 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
LDHA-220ENST00000542179 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
LDHA-220ENST00000542179 PREX2Q70Z35 1606 aa13.88□□□□□ -0.19
LDHA-220ENST00000542179 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
LDHA-220ENST00000542179 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
LDHA-220ENST00000542179 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
LDHA-220ENST00000542179 PLCH2O75038 1416 aa13.86□□□□□ -0.19
LDHA-220ENST00000542179 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 ITGAEP38570 1179 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 CAMSAP2Q08AD1 1489 aa13.85□□□□□ -0.19
LDHA-220ENST00000542179 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
LDHA-220ENST00000542179 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
LDHA-220ENST00000542179 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
LDHA-220ENST00000542179 DAPK1P53355 1430 aa13.82□□□□□ -0.2
LDHA-220ENST00000542179 HRCP23327 699 aa13.82□□□□□ -0.2
LDHA-220ENST00000542179 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
LDHA-220ENST00000542179 ABCC5O15440 1437 aa13.81□□□□□ -0.2
LDHA-220ENST00000542179 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
LDHA-220ENST00000542179 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
LDHA-220ENST00000542179 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
LDHA-220ENST00000542179 PLEKHH2Q8IVE3 1493 aa13.8□□□□□ -0.2
LDHA-220ENST00000542179 ARHGAP5Q13017 1502 aa13.8□□□□□ -0.2
LDHA-220ENST00000542179 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
LDHA-220ENST00000542179 EFCAB2Q5VUJ9 269 aa13.8□□□□□ -0.2
LDHA-220ENST00000542179 ZNF777Q9ULD5 760 aaPredicted RBP13.8□□□□□ -0.2
LDHA-220ENST00000542179 KIAA1107Q9UPP5 1409 aa13.8□□□□□ -0.2
LDHA-220ENST00000542179 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
LDHA-220ENST00000542179 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
LDHA-220ENST00000542179 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
LDHA-220ENST00000542179 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
LDHA-220ENST00000542179 GLI2P10070 1586 aa13.77□□□□□ -0.21
LDHA-220ENST00000542179 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
LDHA-220ENST00000542179 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
LDHA-220ENST00000542179 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
LDHA-220ENST00000542179 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
LDHA-220ENST00000542179 NAIPQ13075 1403 aa13.75□□□□□ -0.21
LDHA-220ENST00000542179 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
LDHA-220ENST00000542179 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
LDHA-220ENST00000542179 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
LDHA-220ENST00000542179 CD109Q6YHK3 1445 aa13.73□□□□□ -0.21
LDHA-220ENST00000542179 GCC2Q8IWJ2 1684 aa13.73□□□□□ -0.21
LDHA-220ENST00000542179 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
LDHA-220ENST00000542179 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.212e-27■■□□□ 12
LDHA-220ENST00000542179 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
LDHA-220ENST00000542179 ABCC1P33527 1531 aa13.73□□□□□ -0.21
LDHA-220ENST00000542179 FANCAO15360 1455 aa13.73□□□□□ -0.21
LDHA-220ENST00000542179 ADGBQ8N7X0 1667 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
LDHA-220ENST00000542179 CHIC2Q9UKJ5 165 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms