RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 ZMYM4Q5VZL5 1548 aa35.41■■■■□ 3.26
C2CD3-216ENST00000541922 ARHGEF40Q8TER5 1519 aa35.4■■■■□ 3.26
C2CD3-216ENST00000541922 POGZQ7Z3K3 1410 aa35.39■■■■□ 3.26
C2CD3-216ENST00000541922 CDC42BPBQ9Y5S2 1711 aa35.38■■■■□ 3.25
C2CD3-216ENST00000541922 PREX2Q70Z35 1606 aa35.35■■■■□ 3.25
C2CD3-216ENST00000541922 MAGI2Q86UL8 1455 aa35.34■■■■□ 3.25
C2CD3-216ENST00000541922 ARID4BQ4LE39 1312 aaPredicted RBP35.32■■■■□ 3.25
C2CD3-216ENST00000541922 ZFYVE16Q7Z3T8 1539 aa35.32■■■■□ 3.25
C2CD3-216ENST00000541922 CDC42BPAQ5VT25 1732 aa35.3■■■■□ 3.24
C2CD3-216ENST00000541922 YEATS2Q9ULM3 1422 aa35.29■■■■□ 3.24
C2CD3-216ENST00000541922 MTUS2Q5JR59 1369 aa35.27■■■■□ 3.24
C2CD3-216ENST00000541922 ZNF518AQ6AHZ1 1483 aa35.26■■■■□ 3.23
C2CD3-216ENST00000541922 BCORL1Q5H9F3 1711 aa35.25■■■■□ 3.23
C2CD3-216ENST00000541922 ADAMTSL3P82987 1691 aa35.24■■■■□ 3.23
C2CD3-216ENST00000541922 AFAP1Q8N556 730 aa35.21■■■■□ 3.23
C2CD3-216ENST00000541922 ABCC1P33527 1531 aa35.19■■■■□ 3.22
C2CD3-216ENST00000541922 GPATCH8Q9UKJ3 1502 aaKnown RBP35.19■■■■□ 3.22
C2CD3-216ENST00000541922 KDM5CP41229 1560 aa35.18■■■■□ 3.22
C2CD3-216ENST00000541922 EHBP1L1Q8N3D4 1523 aa35.16■■■■□ 3.22
C2CD3-216ENST00000541922 ITSN2Q9NZM3 1697 aa35.16■■■■□ 3.22
C2CD3-216ENST00000541922 CCNB3Q8WWL7 1395 aa35.15■■■■□ 3.22
C2CD3-216ENST00000541922 MYT1LQ9UL68 1186 aa35.15■■■■□ 3.22
C2CD3-216ENST00000541922 ZNF777Q9ULD5 760 aaPredicted RBP35.15■■■■□ 3.22
C2CD3-216ENST00000541922 ATP10AO60312 1499 aa35.14■■■■□ 3.22
C2CD3-216ENST00000541922 ARHGEF12Q9NZN5 1544 aa35.13■■■■□ 3.21
C2CD3-216ENST00000541922 SIGLEC1Q9BZZ2 1709 aa35.13■■■■□ 3.21
C2CD3-216ENST00000541922 VPS8Q8N3P4 1428 aa35.13■■■■□ 3.21
C2CD3-216ENST00000541922 MADDQ8WXG6 1647 aa35.13■■■■□ 3.21
C2CD3-216ENST00000541922 HECW2Q9P2P5 1572 aa35.13■■■■□ 3.21
C2CD3-216ENST00000541922 TRAPPC8Q9Y2L5 1435 aa35.12■■■■□ 3.21
C2CD3-216ENST00000541922 PTPRMP28827 1452 aa35.11■■■■□ 3.21
C2CD3-216ENST00000541922 SAMD9LQ8IVG5 1584 aa35.1■■■■□ 3.21
C2CD3-216ENST00000541922 C9orf84Q5VXU9 1444 aa35.1■■■■□ 3.21
C2CD3-216ENST00000541922 CFDP1Q9UEE9 299 aaPredicted RBP35.1■■■■□ 3.21
C2CD3-216ENST00000541922 MLH3Q9UHC1 1453 aa35.07■■■■□ 3.2
C2CD3-216ENST00000541922 TIAM1Q13009 1591 aa35.04■■■■□ 3.2
C2CD3-216ENST00000541922 SYCP2Q9BX26 1530 aa35.03■■■■□ 3.2
C2CD3-216ENST00000541922 RIMS1Q86UR5 1692 aaKnown RBP35.03■■■■□ 3.2
C2CD3-216ENST00000541922 MLECQ14165 292 aa35.03■■■■□ 3.2
C2CD3-216ENST00000541922 DIP2CQ9Y2E4 1556 aa35.02■■■■□ 3.2
C2CD3-216ENST00000541922 PLEKHH2Q8IVE3 1493 aa35.01■■■■□ 3.19
C2CD3-216ENST00000541922 SUPT6HQ7KZ85 1726 aaKnown RBP34.99■■■■□ 3.19
C2CD3-216ENST00000541922 HNRNPMP52272 730 aaKnown RBP eCLIP34.99■■■■□ 3.19
C2CD3-216ENST00000541922 ABCA6Q8N139 1617 aa34.99■■■■□ 3.19
C2CD3-216ENST00000541922 KIAA1107Q9UPP5 1409 aa34.98■■■■□ 3.19
C2CD3-216ENST00000541922 KIDINS220Q9ULH0 1771 aa34.95■■■■□ 3.19
C2CD3-216ENST00000541922 REREQ9P2R6 1566 aa34.95■■■■□ 3.18
C2CD3-216ENST00000541922 NCOA2Q15596 1464 aa34.94■■■■□ 3.18
C2CD3-216ENST00000541922 FER1L4A9Z1Z3 1794 aa34.94■■■■□ 3.18
C2CD3-216ENST00000541922 SPAG9O60271 1321 aaKnown RBP34.91■■■■□ 3.18
C2CD3-216ENST00000541922 LRRC9Q6ZRR7 1453 aa34.9■■■■□ 3.18
C2CD3-216ENST00000541922 ZNF644Q9H582 1327 aaPredicted RBP34.88■■■■□ 3.17
C2CD3-216ENST00000541922 MAP3K1Q13233 1512 aa34.88■■■■□ 3.17
C2CD3-216ENST00000541922 PLPPR3Q6T4P5 718 aa34.85■■■■□ 3.17
C2CD3-216ENST00000541922 AGLP35573 1532 aa34.83■■■■□ 3.17
C2CD3-216ENST00000541922 ATP7AQ04656 1500 aa34.83■■■■□ 3.17
C2CD3-216ENST00000541922 INO80Q9ULG1 1556 aaPredicted RBP34.8■■■■□ 3.16
C2CD3-216ENST00000541922 MBD5Q9P267 1494 aa34.79■■■■□ 3.16
C2CD3-216ENST00000541922 KANK4Q5T7N3 995 aaPredicted RBP34.79■■■■□ 3.16
C2CD3-216ENST00000541922 APLP2Q06481 763 aa34.77■■■■□ 3.16
C2CD3-216ENST00000541922 CAMSAP2Q08AD1 1489 aa34.75■■■■□ 3.15
C2CD3-216ENST00000541922 ESF1Q9H501 851 aaKnown RBP34.7■■■■□ 3.15
C2CD3-216ENST00000541922 A2MP01023 1474 aa34.69■■■■□ 3.14
C2CD3-216ENST00000541922 LMTK3Q96Q04 1460 aa34.69■■■■□ 3.14
C2CD3-216ENST00000541922 RSPH4AQ5TD94 716 aa34.68■■■■□ 3.14
C2CD3-216ENST00000541922 CCDC141Q6ZP82 1450 aa34.68■■■■□ 3.14
C2CD3-216ENST00000541922 ADGBQ8N7X0 1667 aa34.66■■■■□ 3.14
C2CD3-216ENST00000541922 RTEL1-TNFRSF6BF6WH68 1400 aa34.66■■■■□ 3.14
C2CD3-216ENST00000541922 CEBPAP49715 358 aaPredicted RBP34.66■■■■□ 3.14
C2CD3-216ENST00000541922 PLXNC1O60486 1568 aa34.65■■■■□ 3.14
C2CD3-216ENST00000541922 MYOM3Q5VTT5 1437 aa34.62■■■■□ 3.13
C2CD3-216ENST00000541922 ARHGEF5Q12774 1597 aa34.62■■■■□ 3.13
C2CD3-216ENST00000541922 MIA2Q96PC5 1412 aa34.59■■■■□ 3.13
C2CD3-216ENST00000541922 CNTLNQ9NXG0 1405 aa34.59■■■■□ 3.13
C2CD3-216ENST00000541922 C3P01024 1663 aa34.58■■■■□ 3.13
C2CD3-216ENST00000541922 TSPY4P0CV99 314 aa34.55■■■■□ 3.12
C2CD3-216ENST00000541922 TSPY10P0CW01 314 aa34.55■■■■□ 3.12
C2CD3-216ENST00000541922 PREX1Q8TCU6 1659 aa34.54■■■■□ 3.12
C2CD3-216ENST00000541922 SETD1BQ9UPS6 1966 aaKnown RBP34.54■■■■□ 3.12
C2CD3-216ENST00000541922 HSPA2P54652 639 aa34.53■■■■□ 3.12
C2CD3-216ENST00000541922 DHX29Q7Z478 1369 aaKnown RBP34.52■■■■□ 3.12
C2CD3-216ENST00000541922 GGT6Q6P531 493 aa34.52■■■■□ 3.12
C2CD3-216ENST00000541922 MROH2AA6NES4 1674 aa34.5■■■■□ 3.11
C2CD3-216ENST00000541922 CLTCQ00610 1675 aaKnown RBP34.46■■■■□ 3.11
C2CD3-216ENST00000541922 UHRF1BP1Q6BDS2 1440 aa34.45■■■■□ 3.11
C2CD3-216ENST00000541922 PPP6R1Q9UPN7 881 aa34.44■■■■□ 3.1
C2CD3-216ENST00000541922 ZMYM3Q14202 1370 aa34.44■■■■□ 3.1
C2CD3-216ENST00000541922 MAST1Q9Y2H9 1570 aa34.43■■■■□ 3.1
C2CD3-216ENST00000541922 KIF3BO15066 747 aa34.41■■■■□ 3.1
C2CD3-216ENST00000541922 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
C2CD3-216ENST00000541922 NPATQ14207 1427 aa34.36■■■■□ 3.09
C2CD3-216ENST00000541922 FGD6Q6ZV73 1430 aa34.36■■■■□ 3.09
C2CD3-216ENST00000541922 TCOF1Q13428 1488 aaKnown RBP34.3■■■■□ 3.08
C2CD3-216ENST00000541922 CROCC2H7BZ55 1655 aa34.29■■■■□ 3.08
C2CD3-216ENST00000541922 ABCC5O15440 1437 aa34.29■■■■□ 3.08
C2CD3-216ENST00000541922 SHANK2Q9UPX8 1470 aa34.27■■■■□ 3.08
C2CD3-216ENST00000541922 FAM135AQ9P2D6 1515 aa34.26■■■■□ 3.08
C2CD3-216ENST00000541922 PTPRKQ15262 1439 aa34.26■■■■□ 3.07
C2CD3-216ENST00000541922 KDM5DQ9BY66 1539 aa34.25■■■■□ 3.07
C2CD3-216ENST00000541922 DNMT1P26358 1616 aaKnown RBP34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms