RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
CIT-211ENST00000541841 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
CIT-211ENST00000541841 KIF3CO14782 793 aa13.41□□□□□ -0.26
CIT-211ENST00000541841 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
CIT-211ENST00000541841 EMP3P54852 163 aa13.4□□□□□ -0.26
CIT-211ENST00000541841 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
CIT-211ENST00000541841 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
CIT-211ENST00000541841 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
CIT-211ENST00000541841 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CIT-211ENST00000541841 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
CIT-211ENST00000541841 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
CIT-211ENST00000541841 FAM205CA6NFA0 338 aa13.34□□□□□ -0.27
CIT-211ENST00000541841 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
CIT-211ENST00000541841 HOXB1P14653 301 aaPredicted RBP13.32□□□□□ -0.28
CIT-211ENST00000541841 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
CIT-211ENST00000541841 ARSIQ5FYB1 569 aa13.3□□□□□ -0.28
CIT-211ENST00000541841 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
CIT-211ENST00000541841 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
CIT-211ENST00000541841 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
CIT-211ENST00000541841 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
CIT-211ENST00000541841 DSG2Q14126 1118 aa13.24□□□□□ -0.29
CIT-211ENST00000541841 ERBB3P21860 1342 aa13.23□□□□□ -0.29
CIT-211ENST00000541841 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
CIT-211ENST00000541841 GPHNQ9NQX3 736 aaPredicted RBP13.23□□□□□ -0.29
CIT-211ENST00000541841 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
CIT-211ENST00000541841 FOXK1P85037 733 aa13.2□□□□□ -0.3
CIT-211ENST00000541841 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
CIT-211ENST00000541841 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
CIT-211ENST00000541841 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
CIT-211ENST00000541841 NUDT7P0C024 238 aa13.19□□□□□ -0.3
CIT-211ENST00000541841 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
CIT-211ENST00000541841 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
CIT-211ENST00000541841 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
CIT-211ENST00000541841 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
CIT-211ENST00000541841 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
CIT-211ENST00000541841 SLC34A2O95436 690 aa13.14□□□□□ -0.31
CIT-211ENST00000541841 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
CIT-211ENST00000541841 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
CIT-211ENST00000541841 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
CIT-211ENST00000541841 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
CIT-211ENST00000541841 PDE4AP27815 886 aa13.09□□□□□ -0.31
CIT-211ENST00000541841 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
CIT-211ENST00000541841 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
CIT-211ENST00000541841 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
CIT-211ENST00000541841 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
CIT-211ENST00000541841 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
CIT-211ENST00000541841 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
CIT-211ENST00000541841 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
CIT-211ENST00000541841 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
CIT-211ENST00000541841 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
CIT-211ENST00000541841 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
CIT-211ENST00000541841 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
CIT-211ENST00000541841 MFSD10Q14728 455 aa13□□□□□ -0.33
CIT-211ENST00000541841 TBC1D12O60347 775 aa12.96□□□□□ -0.33
CIT-211ENST00000541841 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.33
CIT-211ENST00000541841 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
CIT-211ENST00000541841 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
CIT-211ENST00000541841 EMILIN3Q9NT22 766 aa12.95□□□□□ -0.34
CIT-211ENST00000541841 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
CIT-211ENST00000541841 EVI5O60447 810 aa12.87□□□□□ -0.35
CIT-211ENST00000541841 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
CIT-211ENST00000541841 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
CIT-211ENST00000541841 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
CIT-211ENST00000541841 PSEN2P49810 448 aa12.84□□□□□ -0.35
CIT-211ENST00000541841 PPP4R3BQ5MIZ7 849 aa12.83□□□□□ -0.36
CIT-211ENST00000541841 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
CIT-211ENST00000541841 DPYSL4O14531 572 aa12.82□□□□□ -0.36
CIT-211ENST00000541841 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
CIT-211ENST00000541841 PBX2P40425 430 aa12.81□□□□□ -0.36
CIT-211ENST00000541841 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
CIT-211ENST00000541841 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
CIT-211ENST00000541841 ARHGAP33O14559 1287 aa12.79□□□□□ -0.36
CIT-211ENST00000541841 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
CIT-211ENST00000541841 FOSBP53539 338 aa12.78□□□□□ -0.36
CIT-211ENST00000541841 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
CIT-211ENST00000541841 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
CIT-211ENST00000541841 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
CIT-211ENST00000541841 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
CIT-211ENST00000541841 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
CIT-211ENST00000541841 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
CIT-211ENST00000541841 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
CIT-211ENST00000541841 E2F4Q16254 413 aa12.7□□□□□ -0.38
CIT-211ENST00000541841 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
CIT-211ENST00000541841 ZDHHC16Q969W1 377 aa12.69□□□□□ -0.38
CIT-211ENST00000541841 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
CIT-211ENST00000541841 DDX12PQ92771 950 aa12.68□□□□□ -0.38
CIT-211ENST00000541841 PTPREP23469 700 aa12.65□□□□□ -0.38
CIT-211ENST00000541841 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
CIT-211ENST00000541841 PHF14O94880 888 aa12.63□□□□□ -0.39
CIT-211ENST00000541841 PTGER2P43116 358 aa12.62□□□□□ -0.39
CIT-211ENST00000541841 TK2O00142 265 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 HRO43593 1189 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 PDIA6Q15084 440 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
CIT-211ENST00000541841 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
CIT-211ENST00000541841 COL9A1P20849 921 aa12.59□□□□□ -0.39
CIT-211ENST00000541841 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
CIT-211ENST00000541841 NBR1Q14596 966 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms