RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
C12orf56-204ENST00000541802 MKRN3Q13064 507 aaKnown RBP14.28□□□□□ -0.12
C12orf56-204ENST00000541802 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
C12orf56-204ENST00000541802 KRTAP3-3Q9BYR6 98 aa14.28□□□□□ -0.12
C12orf56-204ENST00000541802 KRTAP3-2Q9BYR7 98 aa14.28□□□□□ -0.12
C12orf56-204ENST00000541802 FAM205CA6NFA0 338 aa14.27□□□□□ -0.13
C12orf56-204ENST00000541802 MFRPQ9BY79 579 aa14.25□□□□□ -0.13
C12orf56-204ENST00000541802 RYDENQ9NUL5 291 aaKnown RBP14.23□□□□□ -0.13
C12orf56-204ENST00000541802 TSHZ2Q9NRE2 1034 aa14.22□□□□□ -0.13
C12orf56-204ENST00000541802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
C12orf56-204ENST00000541802 SOX12O15370 315 aa14.21□□□□□ -0.13
C12orf56-204ENST00000541802 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.13
C12orf56-204ENST00000541802 NLRP6P59044 892 aa14.18□□□□□ -0.14
C12orf56-204ENST00000541802 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
C12orf56-204ENST00000541802 PPP1R37O75864 691 aa14.1□□□□□ -0.15
C12orf56-204ENST00000541802 DPY19L2Q6NUT2 758 aa14.09□□□□□ -0.15
C12orf56-204ENST00000541802 ILDR1Q86SU0 546 aaPredicted RBP14.09□□□□□ -0.15
C12orf56-204ENST00000541802 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
C12orf56-204ENST00000541802 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
C12orf56-204ENST00000541802 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
C12orf56-204ENST00000541802 HOXB3P14651 431 aaPredicted RBP14.05□□□□□ -0.16
C12orf56-204ENST00000541802 G3V3G9 751 aa14.04□□□□□ -0.16
C12orf56-204ENST00000541802 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
C12orf56-204ENST00000541802 HOXB1P14653 301 aaPredicted RBP14.01□□□□□ -0.17
C12orf56-204ENST00000541802 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
C12orf56-204ENST00000541802 ERBB3P21860 1342 aa13.98□□□□□ -0.17
C12orf56-204ENST00000541802 CADPS2Q86UW7 1296 aa13.97□□□□□ -0.17
C12orf56-204ENST00000541802 DOK7Q18PE1 504 aa13.96□□□□□ -0.17
C12orf56-204ENST00000541802 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
C12orf56-204ENST00000541802 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
C12orf56-204ENST00000541802 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
C12orf56-204ENST00000541802 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
C12orf56-204ENST00000541802 MICALL2Q8IY33 904 aa13.83□□□□□ -0.2
C12orf56-204ENST00000541802 WDR70Q9NW82 654 aa13.79□□□□□ -0.2
C12orf56-204ENST00000541802 NCKAP5LQ9HCH0 1330 aa13.79□□□□□ -0.2
C12orf56-204ENST00000541802 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
C12orf56-204ENST00000541802 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
C12orf56-204ENST00000541802 ZSWIM6Q9HCJ5 1215 aa13.76□□□□□ -0.21
C12orf56-204ENST00000541802 PDE4AP27815 886 aa13.75□□□□□ -0.21
C12orf56-204ENST00000541802 CRISPLD2Q9H0B8 497 aa13.73□□□□□ -0.21
C12orf56-204ENST00000541802 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
C12orf56-204ENST00000541802 PTGER2P43116 358 aa13.7□□□□□ -0.22
C12orf56-204ENST00000541802 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
C12orf56-204ENST00000541802 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
C12orf56-204ENST00000541802 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
C12orf56-204ENST00000541802 TMC2Q8TDI7 906 aa13.67□□□□□ -0.22
C12orf56-204ENST00000541802 MFSD10Q14728 455 aa13.66□□□□□ -0.22
C12orf56-204ENST00000541802 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
C12orf56-204ENST00000541802 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
C12orf56-204ENST00000541802 BCANQ96GW7 911 aa13.63□□□□□ -0.23
C12orf56-204ENST00000541802 E2F4Q16254 413 aa13.62□□□□□ -0.23
C12orf56-204ENST00000541802 KCNV2Q8TDN2 545 aa13.62□□□□□ -0.23
C12orf56-204ENST00000541802 DSG2Q14126 1118 aa13.61□□□□□ -0.23
C12orf56-204ENST00000541802 PPP1R15BQ5SWA1 713 aa13.61□□□□□ -0.23
C12orf56-204ENST00000541802 P3H3Q8IVL6 736 aa13.61□□□□□ -0.23
C12orf56-204ENST00000541802 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
C12orf56-204ENST00000541802 KIF3CO14782 793 aa13.59□□□□□ -0.23
C12orf56-204ENST00000541802 FOXK1P85037 733 aa13.57□□□□□ -0.24
C12orf56-204ENST00000541802 NBR1Q14596 966 aa13.56□□□□□ -0.24
C12orf56-204ENST00000541802 PLPP6Q8IY26 295 aa13.55□□□□□ -0.24
C12orf56-204ENST00000541802 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
C12orf56-204ENST00000541802 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
C12orf56-204ENST00000541802 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
C12orf56-204ENST00000541802 CAMK2BQ13554 666 aa13.51□□□□□ -0.25
C12orf56-204ENST00000541802 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
C12orf56-204ENST00000541802 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
C12orf56-204ENST00000541802 PLA2G2EQ9NZK7 142 aa13.44□□□□□ -0.26
C12orf56-204ENST00000541802 DPYSL4O14531 572 aa13.41□□□□□ -0.26
C12orf56-204ENST00000541802 PBX2P40425 430 aa13.4□□□□□ -0.26
C12orf56-204ENST00000541802 UPF1Q92900 1129 aaKnown RBP eCLIP13.4□□□□□ -0.26
C12orf56-204ENST00000541802 ARIH1Q9Y4X5 557 aaPredicted RBP13.4□□□□□ -0.26
C12orf56-204ENST00000541802 SEMA3EO15041 775 aa13.37□□□□□ -0.27
C12orf56-204ENST00000541802 NUDT7P0C024 238 aa13.36□□□□□ -0.27
C12orf56-204ENST00000541802 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
C12orf56-204ENST00000541802 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
C12orf56-204ENST00000541802 POTEEQ6S8J3 1075 aa13.35□□□□□ -0.27
C12orf56-204ENST00000541802 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
C12orf56-204ENST00000541802 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
C12orf56-204ENST00000541802 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
C12orf56-204ENST00000541802 PTCD2Q8WV60 388 aaKnown RBP13.3□□□□□ -0.28
C12orf56-204ENST00000541802 SLC34A2O95436 690 aa13.29□□□□□ -0.28
C12orf56-204ENST00000541802 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
C12orf56-204ENST00000541802 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
C12orf56-204ENST00000541802 PDIA6Q15084 440 aa13.28□□□□□ -0.28
C12orf56-204ENST00000541802 TBC1D12O60347 775 aa13.26□□□□□ -0.29
C12orf56-204ENST00000541802 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
C12orf56-204ENST00000541802 MLLT3P42568 568 aaPredicted RBP13.25□□□□□ -0.29
C12orf56-204ENST00000541802 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
C12orf56-204ENST00000541802 EVI5O60447 810 aa13.23□□□□□ -0.29
C12orf56-204ENST00000541802 TULP1O00294 542 aaPredicted RBP13.22□□□□□ -0.29
C12orf56-204ENST00000541802 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
C12orf56-204ENST00000541802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.21□□□□□ -0.29
C12orf56-204ENST00000541802 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
C12orf56-204ENST00000541802 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
C12orf56-204ENST00000541802 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
C12orf56-204ENST00000541802 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
C12orf56-204ENST00000541802 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
C12orf56-204ENST00000541802 DDX12PQ92771 950 aa13.16□□□□□ -0.3
C12orf56-204ENST00000541802 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
C12orf56-204ENST00000541802 TK2O00142 265 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms