RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 DNMT1P26358 1616 aaKnown RBP26.4■■□□□ 1.82
RAB6A-208ENST00000541795 SETD5Q9C0A6 1442 aa26.39■■□□□ 1.81
RAB6A-208ENST00000541795 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
RAB6A-208ENST00000541795 ASXL2Q76L83 1435 aa26.37■■□□□ 1.81
RAB6A-208ENST00000541795 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
RAB6A-208ENST00000541795 DAPK1P53355 1430 aa26.36■■□□□ 1.81
RAB6A-208ENST00000541795 RAB3GAP2Q9H2M9 1393 aa26.35■■□□□ 1.81
RAB6A-208ENST00000541795 ARHGAP5Q13017 1502 aa26.33■■□□□ 1.8
RAB6A-208ENST00000541795 ABCC5O15440 1437 aa26.32■■□□□ 1.8
RAB6A-208ENST00000541795 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
RAB6A-208ENST00000541795 CYB5RLQ6IPT4 315 aa26.32■■□□□ 1.8
RAB6A-208ENST00000541795 HFM1A2PYH4 1435 aa26.32■■□□□ 1.8
RAB6A-208ENST00000541795 SAMD9LQ8IVG5 1584 aa26.31■■□□□ 1.8
RAB6A-208ENST00000541795 CROCC2H7BZ55 1655 aa26.3■■□□□ 1.8
RAB6A-208ENST00000541795 AKNAQ7Z591 1439 aa26.28■■□□□ 1.8
RAB6A-208ENST00000541795 ABCA9Q8IUA7 1624 aa26.28■■□□□ 1.8
RAB6A-208ENST00000541795 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
RAB6A-208ENST00000541795 PLCH2O75038 1416 aa26.27■■□□□ 1.8
RAB6A-208ENST00000541795 CHIC2Q9UKJ5 165 aa26.27■■□□□ 1.8
RAB6A-208ENST00000541795 NAIPQ13075 1403 aa26.26■■□□□ 1.79
RAB6A-208ENST00000541795 ARHGEF5Q12774 1597 aa26.24■■□□□ 1.79
RAB6A-208ENST00000541795 ADGBQ8N7X0 1667 aa26.24■■□□□ 1.79
RAB6A-208ENST00000541795 ARAP3Q8WWN8 1544 aa26.24■■□□□ 1.79
RAB6A-208ENST00000541795 ROCK1Q13464 1354 aa26.23■■□□□ 1.79
RAB6A-208ENST00000541795 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
RAB6A-208ENST00000541795 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
RAB6A-208ENST00000541795 MAPKBP1O60336 1514 aa26.2■■□□□ 1.79
RAB6A-208ENST00000541795 PLEKHH2Q8IVE3 1493 aa26.2■■□□□ 1.78
RAB6A-208ENST00000541795 MBD5Q9P267 1494 aa26.2■■□□□ 1.78
RAB6A-208ENST00000541795 SHANK2Q9UPX8 1470 aa26.2■■□□□ 1.78
RAB6A-208ENST00000541795 SYCP2Q9BX26 1530 aa26.2■■□□□ 1.78
RAB6A-208ENST00000541795 EFCAB2Q5VUJ9 269 aa26.17■■□□□ 1.78
RAB6A-208ENST00000541795 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
RAB6A-208ENST00000541795 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
RAB6A-208ENST00000541795 HNRNPMP52272 730 aaKnown RBP eCLIP26.16■■□□□ 1.785e-8■■□□□ 12.5
RAB6A-208ENST00000541795 KIAA1107Q9UPP5 1409 aa26.15■■□□□ 1.78
RAB6A-208ENST00000541795 ABCC1P33527 1531 aa26.14■■□□□ 1.77
RAB6A-208ENST00000541795 C9orf84Q5VXU9 1444 aa26.14■■□□□ 1.77
RAB6A-208ENST00000541795 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
RAB6A-208ENST00000541795 NCOA1Q15788 1441 aa26.12■■□□□ 1.77
RAB6A-208ENST00000541795 KDM6BO15054 1643 aa26.11■■□□□ 1.77
RAB6A-208ENST00000541795 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
RAB6A-208ENST00000541795 FANCAO15360 1455 aa26.1■■□□□ 1.77
RAB6A-208ENST00000541795 CLSPNQ9HAW4 1339 aa26.1■■□□□ 1.77
RAB6A-208ENST00000541795 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
RAB6A-208ENST00000541795 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
RAB6A-208ENST00000541795 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
RAB6A-208ENST00000541795 MAST1Q9Y2H9 1570 aa26.07■■□□□ 1.76
RAB6A-208ENST00000541795 CD109Q6YHK3 1445 aa26.05■■□□□ 1.76
RAB6A-208ENST00000541795 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
RAB6A-208ENST00000541795 GLI2P10070 1586 aa26■■□□□ 1.75
RAB6A-208ENST00000541795 ADGRL1O94910 1474 aa25.99■■□□□ 1.75
RAB6A-208ENST00000541795 TRAPPC8Q9Y2L5 1435 aa25.99■■□□□ 1.75
RAB6A-208ENST00000541795 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
RAB6A-208ENST00000541795 ACIN1Q9UKV3 1341 aaKnown RBP25.98■■□□□ 1.75
RAB6A-208ENST00000541795 KIF15Q9NS87 1388 aa25.97■■□□□ 1.75
RAB6A-208ENST00000541795 PLXNC1O60486 1568 aa25.97■■□□□ 1.75
RAB6A-208ENST00000541795 DIP2BQ9P265 1576 aa25.97■■□□□ 1.75
RAB6A-208ENST00000541795 ANKRD50Q9ULJ7 1429 aa25.96■■□□□ 1.75
RAB6A-208ENST00000541795 TRIM52Q96A61 297 aa25.94■■□□□ 1.74
RAB6A-208ENST00000541795 SCAPERQ9BY12 1400 aa25.94■■□□□ 1.74
RAB6A-208ENST00000541795 NEO1Q92859 1461 aa25.89■■□□□ 1.73
RAB6A-208ENST00000541795 ZFYVE16Q7Z3T8 1539 aa25.89■■□□□ 1.73
RAB6A-208ENST00000541795 AFAP1Q8N556 730 aa25.88■■□□□ 1.73
RAB6A-208ENST00000541795 SPAG9O60271 1321 aaKnown RBP25.88■■□□□ 1.73
RAB6A-208ENST00000541795 RTEL1-TNFRSF6BF6WH68 1400 aa25.87■■□□□ 1.73
RAB6A-208ENST00000541795 INO80Q9ULG1 1556 aaPredicted RBP25.87■■□□□ 1.73
RAB6A-208ENST00000541795 FAM69CQ0P6D2 419 aa25.86■■□□□ 1.73
RAB6A-208ENST00000541795 DUOX2Q9NRD8 1548 aa25.85■■□□□ 1.73
RAB6A-208ENST00000541795 ZNF518AQ6AHZ1 1483 aa25.84■■□□□ 1.73
RAB6A-208ENST00000541795 ATP7AQ04656 1500 aa25.84■■□□□ 1.73
RAB6A-208ENST00000541795 DENND4BO75064 1496 aaPredicted RBP25.83■■□□□ 1.73
RAB6A-208ENST00000541795 MPHOSPH9Q99550 1183 aa25.82■■□□□ 1.72
RAB6A-208ENST00000541795 POGZQ7Z3K3 1410 aa25.82■■□□□ 1.72
RAB6A-208ENST00000541795 KIF13AQ9H1H9 1805 aa25.81■■□□□ 1.72
RAB6A-208ENST00000541795 PZPP20742 1482 aa25.8■■□□□ 1.72
RAB6A-208ENST00000541795 TSPOAP1O95153 1857 aa25.8■■□□□ 1.72
RAB6A-208ENST00000541795 ERBINQ96RT1 1412 aa25.79■■□□□ 1.72
RAB6A-208ENST00000541795 KDM5CP41229 1560 aa25.79■■□□□ 1.72
RAB6A-208ENST00000541795 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
RAB6A-208ENST00000541795 PPRC1Q5VV67 1664 aaKnown RBP25.78■■□□□ 1.72
RAB6A-208ENST00000541795 KIDINS220Q9ULH0 1771 aa25.76■■□□□ 1.71
RAB6A-208ENST00000541795 UNC13BO14795 1591 aa25.76■■□□□ 1.71
RAB6A-208ENST00000541795 SLC4A1APQ9BWU0 796 aaKnown RBP25.75■■□□□ 1.71
RAB6A-208ENST00000541795 SIN3AQ96ST3 1273 aa25.74■■□□□ 1.71
RAB6A-208ENST00000541795 NUP155O75694 1391 aa25.73■■□□□ 1.71
RAB6A-208ENST00000541795 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
RAB6A-208ENST00000541795 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
RAB6A-208ENST00000541795 TEX14Q8IWB6 1497 aa25.73■■□□□ 1.71
RAB6A-208ENST00000541795 RICTORQ6R327 1708 aa25.72■■□□□ 1.71
RAB6A-208ENST00000541795 NEUROD1Q13562 356 aa25.71■■□□□ 1.71
RAB6A-208ENST00000541795 MLH3Q9UHC1 1453 aa25.7■■□□□ 1.71
RAB6A-208ENST00000541795 FOXD1Q16676 465 aa25.67■■□□□ 1.7
RAB6A-208ENST00000541795 MAGI2Q86UL8 1455 aa25.67■■□□□ 1.7
RAB6A-208ENST00000541795 FAM135AQ9P2D6 1515 aa25.67■■□□□ 1.7
RAB6A-208ENST00000541795 RAPGEF3O95398 923 aa25.65■■□□□ 1.7
RAB6A-208ENST00000541795 IQGAP3Q86VI3 1631 aa25.65■■□□□ 1.7
RAB6A-208ENST00000541795 EIF2AK4Q9P2K8 1649 aaKnown RBP25.65■■□□□ 1.7
RAB6A-208ENST00000541795 FRMPD1Q5SYB0 1578 aa25.64■■□□□ 1.7
RAB6A-208ENST00000541795 DHX29Q7Z478 1369 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms