RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 RYDENQ9NUL5 291 aaKnown RBP9.61□□□□□ -0.87
CUL3-214ENST00000541548 C2orf72A6NCS6 295 aa9.6□□□□□ -0.87
CUL3-214ENST00000541548 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
CUL3-214ENST00000541548 NCKAP5LQ9HCH0 1330 aa9.59□□□□□ -0.87
CUL3-214ENST00000541548 G3V3G9 751 aa9.59□□□□□ -0.87
CUL3-214ENST00000541548 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
CUL3-214ENST00000541548 ST18O60284 1047 aa9.54□□□□□ -0.88
CUL3-214ENST00000541548 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
CUL3-214ENST00000541548 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
CUL3-214ENST00000541548 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
CUL3-214ENST00000541548 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.52□□□□□ -0.89
CUL3-214ENST00000541548 FOXK1P85037 733 aa9.51□□□□□ -0.89
CUL3-214ENST00000541548 DSG2Q14126 1118 aa9.51□□□□□ -0.89
CUL3-214ENST00000541548 MFSD10Q14728 455 aa9.5□□□□□ -0.89
CUL3-214ENST00000541548 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
CUL3-214ENST00000541548 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
CUL3-214ENST00000541548 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
CUL3-214ENST00000541548 SNPHO15079 494 aa9.46□□□□□ -0.9
CUL3-214ENST00000541548 GPR153Q6NV75 609 aa9.46□□□□□ -0.9
CUL3-214ENST00000541548 SLC34A2O95436 690 aa9.45□□□□□ -0.9
CUL3-214ENST00000541548 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
CUL3-214ENST00000541548 PLCB2Q00722 1185 aa9.44□□□□□ -0.9
CUL3-214ENST00000541548 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
CUL3-214ENST00000541548 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
CUL3-214ENST00000541548 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
CUL3-214ENST00000541548 POTEB3A0JP26 581 aa9.42□□□□□ -0.9
CUL3-214ENST00000541548 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
CUL3-214ENST00000541548 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
CUL3-214ENST00000541548 POTEBQ6S5H4 581 aa9.42□□□□□ -0.9
CUL3-214ENST00000541548 PDE4AP27815 886 aa9.41□□□□□ -0.9
CUL3-214ENST00000541548 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
CUL3-214ENST00000541548 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
CUL3-214ENST00000541548 MARVELD3Q96A59 401 aa9.4□□□□□ -0.9
CUL3-214ENST00000541548 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
CUL3-214ENST00000541548 PTCD2Q8WV60 388 aaKnown RBP9.39□□□□□ -0.91
CUL3-214ENST00000541548 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
CUL3-214ENST00000541548 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
CUL3-214ENST00000541548 DDX27Q96GQ7 796 aaKnown RBP9.38□□□□□ -0.91
CUL3-214ENST00000541548 EMILIN3Q9NT22 766 aa9.38□□□□□ -0.91
CUL3-214ENST00000541548 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
CUL3-214ENST00000541548 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
CUL3-214ENST00000541548 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
CUL3-214ENST00000541548 RIMBP2O15034 1052 aa9.32□□□□□ -0.92
CUL3-214ENST00000541548 NUDT7P0C024 238 aa9.31□□□□□ -0.92
CUL3-214ENST00000541548 EMP3P54852 163 aa9.31□□□□□ -0.92
CUL3-214ENST00000541548 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
CUL3-214ENST00000541548 UPF1Q92900 1129 aaKnown RBP eCLIP9.29□□□□□ -0.92
CUL3-214ENST00000541548 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
CUL3-214ENST00000541548 ZNF316A6NFI3 1004 aaPredicted RBP9.26□□□□□ -0.93
CUL3-214ENST00000541548 LHX6Q9UPM6 363 aa9.26□□□□□ -0.93
CUL3-214ENST00000541548 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
CUL3-214ENST00000541548 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
CUL3-214ENST00000541548 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
CUL3-214ENST00000541548 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
CUL3-214ENST00000541548 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
CUL3-214ENST00000541548 POTEEQ6S8J3 1075 aa9.24□□□□□ -0.93
CUL3-214ENST00000541548 ANO8Q9HCE9 1232 aaPredicted RBP9.24□□□□□ -0.93
CUL3-214ENST00000541548 CDAN1Q8IWY9 1227 aa9.23□□□□□ -0.93
CUL3-214ENST00000541548 DPYSL4O14531 572 aa9.22□□□□□ -0.93
CUL3-214ENST00000541548 E2F4Q16254 413 aa9.21□□□□□ -0.94
CUL3-214ENST00000541548 KCNV2Q8TDN2 545 aa9.21□□□□□ -0.94
CUL3-214ENST00000541548 ERBB3P21860 1342 aa9.21□□□□□ -0.94
CUL3-214ENST00000541548 EVI5O60447 810 aa9.2□□□□□ -0.94
CUL3-214ENST00000541548 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
CUL3-214ENST00000541548 PDIA6Q15084 440 aa9.19□□□□□ -0.94
CUL3-214ENST00000541548 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
CUL3-214ENST00000541548 TBC1D12O60347 775 aa9.17□□□□□ -0.94
CUL3-214ENST00000541548 FOSBP53539 338 aa9.17□□□□□ -0.94
CUL3-214ENST00000541548 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
CUL3-214ENST00000541548 PTGER2P43116 358 aa9.13□□□□□ -0.95
CUL3-214ENST00000541548 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
CUL3-214ENST00000541548 WDR70Q9NW82 654 aa9.13□□□□□ -0.95
CUL3-214ENST00000541548 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
CUL3-214ENST00000541548 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
CUL3-214ENST00000541548 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
CUL3-214ENST00000541548 VSIG10Q8N0Z9 540 aa9.09□□□□□ -0.95
CUL3-214ENST00000541548 ZNF454Q8N9F8 522 aa9.09□□□□□ -0.95
CUL3-214ENST00000541548 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
CUL3-214ENST00000541548 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
CUL3-214ENST00000541548 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
CUL3-214ENST00000541548 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
CUL3-214ENST00000541548 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
CUL3-214ENST00000541548 PHF14O94880 888 aa9.07□□□□□ -0.96
CUL3-214ENST00000541548 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
CUL3-214ENST00000541548 PBX2P40425 430 aa9.06□□□□□ -0.96
CUL3-214ENST00000541548 PSEN2P49810 448 aa9.06□□□□□ -0.96
CUL3-214ENST00000541548 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
CUL3-214ENST00000541548 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
CUL3-214ENST00000541548 DDX12PQ92771 950 aa9.05□□□□□ -0.96
CUL3-214ENST00000541548 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
CUL3-214ENST00000541548 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
CUL3-214ENST00000541548 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
CUL3-214ENST00000541548 MLLT3P42568 568 aaPredicted RBP9.03□□□□□ -0.96
CUL3-214ENST00000541548 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
CUL3-214ENST00000541548 SPNS2Q8IVW8 549 aa9.03□□□□□ -0.96
CUL3-214ENST00000541548 OSBPP22059 807 aa9.02□□□□□ -0.97
CUL3-214ENST00000541548 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
CUL3-214ENST00000541548 COL9A1P20849 921 aa9□□□□□ -0.97
CUL3-214ENST00000541548 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
CUL3-214ENST00000541548 KCNK17Q96T54 332 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms