RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
KNTC1-211ENST00000541427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
KNTC1-211ENST00000541427 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
KNTC1-211ENST00000541427 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
KNTC1-211ENST00000541427 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
KNTC1-211ENST00000541427 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
KNTC1-211ENST00000541427 PTGER2P43116 358 aa11.48□□□□□ -0.57
KNTC1-211ENST00000541427 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
KNTC1-211ENST00000541427 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.58
KNTC1-211ENST00000541427 ZNF316A6NFI3 1004 aaPredicted RBP11.43□□□□□ -0.58
KNTC1-211ENST00000541427 NLRP6P59044 892 aa11.41□□□□□ -0.58
KNTC1-211ENST00000541427 LSM11P83369 360 aaKnown RBP eCLIP11.39□□□□□ -0.59
KNTC1-211ENST00000541427 FBXO22Q8NEZ5 403 aa11.38□□□□□ -0.59
KNTC1-211ENST00000541427 BCL11BQ9C0K0 894 aaPredicted RBP11.36□□□□□ -0.59
KNTC1-211ENST00000541427 NUDT7P0C024 238 aa11.33□□□□□ -0.6
KNTC1-211ENST00000541427 KIF3CO14782 793 aa11.32□□□□□ -0.6
KNTC1-211ENST00000541427 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
KNTC1-211ENST00000541427 C2orf72A6NCS6 295 aa11.31□□□□□ -0.6
KNTC1-211ENST00000541427 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
KNTC1-211ENST00000541427 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
KNTC1-211ENST00000541427 PBX2P40425 430 aa11.3□□□□□ -0.6
KNTC1-211ENST00000541427 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
KNTC1-211ENST00000541427 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
KNTC1-211ENST00000541427 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
KNTC1-211ENST00000541427 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
KNTC1-211ENST00000541427 STK25O00506 426 aa11.24□□□□□ -0.61
KNTC1-211ENST00000541427 SLC34A2O95436 690 aa11.24□□□□□ -0.61
KNTC1-211ENST00000541427 TMC2Q8TDI7 906 aa11.21□□□□□ -0.61
KNTC1-211ENST00000541427 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
KNTC1-211ENST00000541427 HCSTQ9UBK5 93 aa11.2□□□□□ -0.62
KNTC1-211ENST00000541427 ADGRD1Q6QNK2 874 aa11.17□□□□□ -0.62
KNTC1-211ENST00000541427 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
KNTC1-211ENST00000541427 ARHGAP33O14559 1287 aa11.16□□□□□ -0.62
KNTC1-211ENST00000541427 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
KNTC1-211ENST00000541427 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
KNTC1-211ENST00000541427 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
KNTC1-211ENST00000541427 KDM4FA0A1W2PPD8 638 aa11.09□□□□□ -0.63
KNTC1-211ENST00000541427 PPP1R37O75864 691 aa11.09□□□□□ -0.63
KNTC1-211ENST00000541427 TK2O00142 265 aa11.08□□□□□ -0.64
KNTC1-211ENST00000541427 PSEN2P49810 448 aa11.07□□□□□ -0.64
KNTC1-211ENST00000541427 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
KNTC1-211ENST00000541427 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
KNTC1-211ENST00000541427 RGL2O15211 777 aa11.06□□□□□ -0.64
KNTC1-211ENST00000541427 HRO43593 1189 aa11.06□□□□□ -0.64
KNTC1-211ENST00000541427 PKD2Q13563 968 aa11.05□□□□□ -0.64
KNTC1-211ENST00000541427 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
KNTC1-211ENST00000541427 FOXK1P85037 733 aa11.01□□□□□ -0.65
KNTC1-211ENST00000541427 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
KNTC1-211ENST00000541427 PLPP6Q8IY26 295 aa11□□□□□ -0.65
KNTC1-211ENST00000541427 STAC3Q96MF2 364 aa11□□□□□ -0.65
KNTC1-211ENST00000541427 TBC1D12O60347 775 aa10.96□□□□□ -0.65
KNTC1-211ENST00000541427 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
KNTC1-211ENST00000541427 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
KNTC1-211ENST00000541427 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
KNTC1-211ENST00000541427 DSG2Q14126 1118 aa10.94□□□□□ -0.66
KNTC1-211ENST00000541427 PTPN5P54829 565 aa10.91□□□□□ -0.66
KNTC1-211ENST00000541427 VPS9D1Q9Y2B5 631 aa10.91□□□□□ -0.66
KNTC1-211ENST00000541427 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
KNTC1-211ENST00000541427 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
KNTC1-211ENST00000541427 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
KNTC1-211ENST00000541427 SLC4A5Q9BY07 1137 aa10.83□□□□□ -0.68
KNTC1-211ENST00000541427 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
KNTC1-211ENST00000541427 HS6ST3Q8IZP7 471 aa10.82□□□□□ -0.68
KNTC1-211ENST00000541427 RGS20O76081 388 aa10.81□□□□□ -0.68
KNTC1-211ENST00000541427 IFFO2Q5TF58 517 aa10.81□□□□□ -0.68
KNTC1-211ENST00000541427 THSD4Q6ZMP0 1018 aa10.81□□□□□ -0.68
KNTC1-211ENST00000541427 BHMG1C9JSJ3 638 aaPredicted RBP10.79□□□□□ -0.68
KNTC1-211ENST00000541427 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
KNTC1-211ENST00000541427 PTPREP23469 700 aa10.78□□□□□ -0.68
KNTC1-211ENST00000541427 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
KNTC1-211ENST00000541427 FOSBP53539 338 aa10.77□□□□□ -0.69
KNTC1-211ENST00000541427 WNT2BQ93097 391 aa10.77□□□□□ -0.69
KNTC1-211ENST00000541427 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
KNTC1-211ENST00000541427 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
KNTC1-211ENST00000541427 A0A0G2JS52 829 aa10.75□□□□□ -0.69
KNTC1-211ENST00000541427 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
KNTC1-211ENST00000541427 CRISPLD2Q9H0B8 497 aa10.74□□□□□ -0.69
KNTC1-211ENST00000541427 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
KNTC1-211ENST00000541427 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
KNTC1-211ENST00000541427 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
KNTC1-211ENST00000541427 NKX1-1Q15270 411 aaPredicted RBP10.7□□□□□ -0.7
KNTC1-211ENST00000541427 NBPF3Q9H094 633 aa10.7□□□□□ -0.7
KNTC1-211ENST00000541427 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
KNTC1-211ENST00000541427 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
KNTC1-211ENST00000541427 ADAM33Q9BZ11 813 aa10.69□□□□□ -0.7
KNTC1-211ENST00000541427 EVI5O60447 810 aa10.68□□□□□ -0.7
KNTC1-211ENST00000541427 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
KNTC1-211ENST00000541427 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
KNTC1-211ENST00000541427 PDE4AP27815 886 aa10.65□□□□□ -0.7
KNTC1-211ENST00000541427 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
KNTC1-211ENST00000541427 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
KNTC1-211ENST00000541427 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
KNTC1-211ENST00000541427 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
KNTC1-211ENST00000541427 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
KNTC1-211ENST00000541427 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
KNTC1-211ENST00000541427 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
KNTC1-211ENST00000541427 LARP6Q9BRS8 491 aaKnown RBP10.58□□□□□ -0.72
KNTC1-211ENST00000541427 BCAMP50895 628 aa10.57□□□□□ -0.72
KNTC1-211ENST00000541427 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
KNTC1-211ENST00000541427 COL9A1P20849 921 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms