RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 KIAA1211Q6ZU35 1233 aa12.77□□□□□ -0.37
TRERF1-205ENST00000541110 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.37
TRERF1-205ENST00000541110 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
TRERF1-205ENST00000541110 CEP89Q96ST8 783 aa12.77□□□□□ -0.37
TRERF1-205ENST00000541110 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
TRERF1-205ENST00000541110 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
TRERF1-205ENST00000541110 MARCH6O60337 910 aa12.74□□□□□ -0.37
TRERF1-205ENST00000541110 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
TRERF1-205ENST00000541110 RTN4Q9NQC3 1192 aaKnown RBP12.74□□□□□ -0.37
TRERF1-205ENST00000541110 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
TRERF1-205ENST00000541110 STK26Q9P289 416 aa12.74□□□□□ -0.37
TRERF1-205ENST00000541110 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
TRERF1-205ENST00000541110 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
TRERF1-205ENST00000541110 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-205ENST00000541110 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
TRERF1-205ENST00000541110 TCEAL9Q9UHQ7 104 aa12.72□□□□□ -0.37
TRERF1-205ENST00000541110 MS4A1P11836 297 aa12.72□□□□□ -0.37
TRERF1-205ENST00000541110 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
TRERF1-205ENST00000541110 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
TRERF1-205ENST00000541110 RAD21O60216 631 aa12.7□□□□□ -0.38
TRERF1-205ENST00000541110 CTDP1Q9Y5B0 961 aaPredicted RBP12.7□□□□□ -0.38
TRERF1-205ENST00000541110 KANK1Q14678 1352 aa12.69□□□□□ -0.38
TRERF1-205ENST00000541110 TPM4P67936 248 aa12.68□□□□□ -0.38
TRERF1-205ENST00000541110 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
TRERF1-205ENST00000541110 ARID3AQ99856 593 aa12.67□□□□□ -0.38
TRERF1-205ENST00000541110 TOMM22Q9NS69 142 aa12.66□□□□□ -0.38
TRERF1-205ENST00000541110 PES1O00541 588 aaKnown RBP12.66□□□□□ -0.38
TRERF1-205ENST00000541110 GPATCH3Q96I76 525 aa12.66□□□□□ -0.38
TRERF1-205ENST00000541110 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
TRERF1-205ENST00000541110 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
TRERF1-205ENST00000541110 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
TRERF1-205ENST00000541110 FBXW7Q969H0 707 aa12.64□□□□□ -0.39
TRERF1-205ENST00000541110 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
TRERF1-205ENST00000541110 EVA1CP58658 441 aa12.63□□□□□ -0.39
TRERF1-205ENST00000541110 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
TRERF1-205ENST00000541110 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
TRERF1-205ENST00000541110 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
TRERF1-205ENST00000541110 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
TRERF1-205ENST00000541110 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
TRERF1-205ENST00000541110 GGT6Q6P531 493 aa12.6□□□□□ -0.39
TRERF1-205ENST00000541110 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
TRERF1-205ENST00000541110 TPD52L1Q16890 204 aaPredicted RBP12.59□□□□□ -0.39
TRERF1-205ENST00000541110 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
TRERF1-205ENST00000541110 TMF1P82094 1093 aa12.59□□□□□ -0.39
TRERF1-205ENST00000541110 CFAP44Q96MT7 982 aa12.58□□□□□ -0.39
TRERF1-205ENST00000541110 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
TRERF1-205ENST00000541110 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
TRERF1-205ENST00000541110 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
TRERF1-205ENST00000541110 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
TRERF1-205ENST00000541110 TNNT3P45378 269 aaPredicted RBP12.57□□□□□ -0.4
TRERF1-205ENST00000541110 MIER1Q8N108 512 aa12.56□□□□□ -0.4
TRERF1-205ENST00000541110 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRERF1-205ENST00000541110 DCAF11Q8TEB1 546 aa12.56□□□□□ -0.4
TRERF1-205ENST00000541110 NOL10Q9BSC4 688 aaKnown RBP12.56□□□□□ -0.4
TRERF1-205ENST00000541110 TPM3P06753 285 aa12.55□□□□□ -0.4
TRERF1-205ENST00000541110 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
TRERF1-205ENST00000541110 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
TRERF1-205ENST00000541110 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
TRERF1-205ENST00000541110 STK31Q9BXU1 1019 aa12.54□□□□□ -0.4
TRERF1-205ENST00000541110 AMOTL1Q8IY63 956 aa12.53□□□□□ -0.4
TRERF1-205ENST00000541110 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TRERF1-205ENST00000541110 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
TRERF1-205ENST00000541110 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
TRERF1-205ENST00000541110 NGDNQ8NEJ9 315 aaKnown RBP12.53□□□□□ -0.4
TRERF1-205ENST00000541110 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
TRERF1-205ENST00000541110 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
TRERF1-205ENST00000541110 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
TRERF1-205ENST00000541110 TPM2P07951 284 aa12.52□□□□□ -0.41
TRERF1-205ENST00000541110 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
TRERF1-205ENST00000541110 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
TRERF1-205ENST00000541110 USP35Q9P2H5 1018 aa12.51□□□□□ -0.41
TRERF1-205ENST00000541110 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
TRERF1-205ENST00000541110 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
TRERF1-205ENST00000541110 AMPHP49418 695 aa12.5□□□□□ -0.41
TRERF1-205ENST00000541110 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
TRERF1-205ENST00000541110 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
TRERF1-205ENST00000541110 VPS37DQ86XT2 251 aa12.5□□□□□ -0.41
TRERF1-205ENST00000541110 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
TRERF1-205ENST00000541110 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
TRERF1-205ENST00000541110 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-205ENST00000541110 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-205ENST00000541110 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRERF1-205ENST00000541110 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
TRERF1-205ENST00000541110 CSPP1Q1MSJ5 1256 aa12.48□□□□□ -0.41
TRERF1-205ENST00000541110 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
TRERF1-205ENST00000541110 H3BQV1 296 aa12.47□□□□□ -0.41
TRERF1-205ENST00000541110 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
TRERF1-205ENST00000541110 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
TRERF1-205ENST00000541110 CCAR2Q8N163 923 aaKnown RBP12.47□□□□□ -0.41
TRERF1-205ENST00000541110 PAF1Q8N7H5 531 aa12.46□□□□□ -0.41
TRERF1-205ENST00000541110 CLIP1P30622 1438 aa12.46□□□□□ -0.41
TRERF1-205ENST00000541110 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
TRERF1-205ENST00000541110 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.42
TRERF1-205ENST00000541110 FOXD4L5Q5VV16 416 aaPredicted RBP12.46□□□□□ -0.42
TRERF1-205ENST00000541110 FOXD4L4Q8WXT5 416 aaPredicted RBP12.46□□□□□ -0.42
TRERF1-205ENST00000541110 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
TRERF1-205ENST00000541110 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
TRERF1-205ENST00000541110 PTMSP20962 102 aa12.45□□□□□ -0.42
TRERF1-205ENST00000541110 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
TRERF1-205ENST00000541110 ODF2Q5BJF6 829 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms