RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
TCF4-207ENST00000540999 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
TCF4-207ENST00000540999 DEKP35659 375 aaKnown RBP12.55□□□□□ -0.4
TCF4-207ENST00000540999 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
TCF4-207ENST00000540999 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
TCF4-207ENST00000540999 ITGAEP38570 1179 aa12.53□□□□□ -0.4
TCF4-207ENST00000540999 MAGI3Q5TCQ9 1506 aa12.52□□□□□ -0.41
TCF4-207ENST00000540999 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
TCF4-207ENST00000540999 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
TCF4-207ENST00000540999 MTUS2Q5JR59 1369 aa12.51□□□□□ -0.41
TCF4-207ENST00000540999 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
TCF4-207ENST00000540999 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
TCF4-207ENST00000540999 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
TCF4-207ENST00000540999 EPRSP07814 1512 aaKnown RBP12.5□□□□□ -0.41
TCF4-207ENST00000540999 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
TCF4-207ENST00000540999 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
TCF4-207ENST00000540999 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
TCF4-207ENST00000540999 NAP1L5Q96NT1 182 aaPredicted RBP12.49□□□□□ -0.41
TCF4-207ENST00000540999 CCER1Q8TC90 406 aaPredicted RBP12.49□□□□□ -0.41
TCF4-207ENST00000540999 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
TCF4-207ENST00000540999 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
TCF4-207ENST00000540999 NUP153P49790 1475 aaKnown RBP12.48□□□□□ -0.41
TCF4-207ENST00000540999 RAPGEF6Q8TEU7 1601 aa12.47□□□□□ -0.41
TCF4-207ENST00000540999 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
TCF4-207ENST00000540999 FAM50AQ14320 339 aaKnown RBP12.47□□□□□ -0.41
TCF4-207ENST00000540999 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
TCF4-207ENST00000540999 CCDC18Q5T9S5 1454 aa12.46□□□□□ -0.42
TCF4-207ENST00000540999 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
TCF4-207ENST00000540999 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
TCF4-207ENST00000540999 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
TCF4-207ENST00000540999 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
TCF4-207ENST00000540999 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
TCF4-207ENST00000540999 SUPT6HQ7KZ85 1726 aaKnown RBP12.41□□□□□ -0.42
TCF4-207ENST00000540999 PTPRGP23470 1445 aa12.41□□□□□ -0.42
TCF4-207ENST00000540999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCF4-207ENST00000540999 BCCIPQ9P287 314 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCF4-207ENST00000540999 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
TCF4-207ENST00000540999 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
TCF4-207ENST00000540999 ABCA8O94911 1581 aa12.39□□□□□ -0.43
TCF4-207ENST00000540999 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
TCF4-207ENST00000540999 IGSF3O75054 1194 aa12.38□□□□□ -0.43
TCF4-207ENST00000540999 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
TCF4-207ENST00000540999 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
TCF4-207ENST00000540999 ATP10BO94823 1461 aa12.36□□□□□ -0.43
TCF4-207ENST00000540999 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
TCF4-207ENST00000540999 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
TCF4-207ENST00000540999 KIF14Q15058 1648 aa12.33□□□□□ -0.43
TCF4-207ENST00000540999 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.44
TCF4-207ENST00000540999 ZNF644Q9H582 1327 aaPredicted RBP12.33□□□□□ -0.44
TCF4-207ENST00000540999 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
TCF4-207ENST00000540999 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
TCF4-207ENST00000540999 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
TCF4-207ENST00000540999 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
TCF4-207ENST00000540999 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
TCF4-207ENST00000540999 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
TCF4-207ENST00000540999 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
TCF4-207ENST00000540999 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
TCF4-207ENST00000540999 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
TCF4-207ENST00000540999 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
TCF4-207ENST00000540999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
TCF4-207ENST00000540999 SETD5Q9C0A6 1442 aa12.28□□□□□ -0.44
TCF4-207ENST00000540999 NAP1L2Q9ULW6 460 aaPredicted RBP12.27□□□□□ -0.44
TCF4-207ENST00000540999 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
TCF4-207ENST00000540999 ABCC2Q92887 1545 aa12.27□□□□□ -0.45
TCF4-207ENST00000540999 TCOF1Q13428 1488 aaKnown RBP12.26□□□□□ -0.45
TCF4-207ENST00000540999 GPATCH8Q9UKJ3 1502 aaKnown RBP12.26□□□□□ -0.45
TCF4-207ENST00000540999 RRP7BPQ9NSQ0 103 aa12.25□□□□□ -0.45
TCF4-207ENST00000540999 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
TCF4-207ENST00000540999 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
TCF4-207ENST00000540999 ADCY10Q96PN6 1610 aa12.25□□□□□ -0.45
TCF4-207ENST00000540999 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
TCF4-207ENST00000540999 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
TCF4-207ENST00000540999 CDC42BPAQ5VT25 1732 aa12.22□□□□□ -0.45
TCF4-207ENST00000540999 CCDC9Q9Y3X0 531 aaKnown RBP12.22□□□□□ -0.45
TCF4-207ENST00000540999 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.45
TCF4-207ENST00000540999 NAIPQ13075 1403 aa12.21□□□□□ -0.46
TCF4-207ENST00000540999 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
TCF4-207ENST00000540999 ITSN2Q9NZM3 1697 aa12.2□□□□□ -0.46
TCF4-207ENST00000540999 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
TCF4-207ENST00000540999 ABCC5O15440 1437 aa12.2□□□□□ -0.46
TCF4-207ENST00000540999 DAPK1P53355 1430 aa12.19□□□□□ -0.46
TCF4-207ENST00000540999 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
TCF4-207ENST00000540999 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
TCF4-207ENST00000540999 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
TCF4-207ENST00000540999 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
TCF4-207ENST00000540999 KDM6BO15054 1643 aa12.18□□□□□ -0.46
TCF4-207ENST00000540999 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
TCF4-207ENST00000540999 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
TCF4-207ENST00000540999 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
TCF4-207ENST00000540999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.17□□□□□ -0.46
TCF4-207ENST00000540999 CDC42BPBQ9Y5S2 1711 aa12.16□□□□□ -0.46
TCF4-207ENST00000540999 HNRNPMP52272 730 aaKnown RBP eCLIP12.16□□□□□ -0.467e-6■■■□□ 17
TCF4-207ENST00000540999 BRPF3Q9ULD4 1205 aa12.16□□□□□ -0.46
TCF4-207ENST00000540999 SIN3AQ96ST3 1273 aa12.14□□□□□ -0.47
TCF4-207ENST00000540999 CHMP4BQ9H444 224 aaKnown RBP12.14□□□□□ -0.47
TCF4-207ENST00000540999 PREX2Q70Z35 1606 aa12.12□□□□□ -0.47
TCF4-207ENST00000540999 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
TCF4-207ENST00000540999 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
TCF4-207ENST00000540999 IPO4Q8TEX9 1081 aaKnown RBP12.12□□□□□ -0.47
TCF4-207ENST00000540999 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms