RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 PTPRGP23470 1445 aa13.27□□□□□ -0.28
CLDN2-202ENST00000540876 SAMD9Q5K651 1589 aa13.27□□□□□ -0.28
CLDN2-202ENST00000540876 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.29
CLDN2-202ENST00000540876 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
CLDN2-202ENST00000540876 WASHC2CQ9Y4E1 1318 aa13.26□□□□□ -0.29
CLDN2-202ENST00000540876 ANP32CO43423 234 aa13.25□□□□□ -0.29
CLDN2-202ENST00000540876 EFCAB5A4FU69 1503 aa13.25□□□□□ -0.29
CLDN2-202ENST00000540876 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
CLDN2-202ENST00000540876 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLDN2-202ENST00000540876 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
CLDN2-202ENST00000540876 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
CLDN2-202ENST00000540876 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
CLDN2-202ENST00000540876 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
CLDN2-202ENST00000540876 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
CLDN2-202ENST00000540876 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
CLDN2-202ENST00000540876 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
CLDN2-202ENST00000540876 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
CLDN2-202ENST00000540876 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
CLDN2-202ENST00000540876 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
CLDN2-202ENST00000540876 GSE1Q14687 1217 aa13.16□□□□□ -0.3
CLDN2-202ENST00000540876 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
CLDN2-202ENST00000540876 NUP153P49790 1475 aaKnown RBP13.15□□□□□ -0.3
CLDN2-202ENST00000540876 UACAQ9BZF9 1416 aa13.15□□□□□ -0.3
CLDN2-202ENST00000540876 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
CLDN2-202ENST00000540876 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
CLDN2-202ENST00000540876 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
CLDN2-202ENST00000540876 FYCO1Q9BQS8 1478 aa13.12□□□□□ -0.31
CLDN2-202ENST00000540876 EPRSP07814 1512 aaKnown RBP13.11□□□□□ -0.31
CLDN2-202ENST00000540876 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
CLDN2-202ENST00000540876 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
CLDN2-202ENST00000540876 DNAJC5Q9H3Z4 198 aa13.11□□□□□ -0.31
CLDN2-202ENST00000540876 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
CLDN2-202ENST00000540876 ATP10BO94823 1461 aa13.1□□□□□ -0.31
CLDN2-202ENST00000540876 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
CLDN2-202ENST00000540876 ABCA8O94911 1581 aa13.09□□□□□ -0.31
CLDN2-202ENST00000540876 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
CLDN2-202ENST00000540876 LRRIQ1Q96JM4 1722 aa13.08□□□□□ -0.31
CLDN2-202ENST00000540876 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
CLDN2-202ENST00000540876 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
CLDN2-202ENST00000540876 PLEKHD1A6NEE1 506 aa13.07□□□□□ -0.32
CLDN2-202ENST00000540876 MAGI3Q5TCQ9 1506 aa13.07□□□□□ -0.32
CLDN2-202ENST00000540876 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLDN2-202ENST00000540876 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
CLDN2-202ENST00000540876 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
CLDN2-202ENST00000540876 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
CLDN2-202ENST00000540876 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
CLDN2-202ENST00000540876 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
CLDN2-202ENST00000540876 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
CLDN2-202ENST00000540876 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
CLDN2-202ENST00000540876 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
CLDN2-202ENST00000540876 PDE4CQ08493 712 aa13.01□□□□□ -0.33
CLDN2-202ENST00000540876 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
CLDN2-202ENST00000540876 PHLDB1Q86UU1 1377 aa13.01□□□□□ -0.33
CLDN2-202ENST00000540876 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
CLDN2-202ENST00000540876 FGD1P98174 961 aa13□□□□□ -0.33
CLDN2-202ENST00000540876 AAMPQ13685 434 aa13□□□□□ -0.33
CLDN2-202ENST00000540876 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
CLDN2-202ENST00000540876 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
CLDN2-202ENST00000540876 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
CLDN2-202ENST00000540876 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
CLDN2-202ENST00000540876 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
CLDN2-202ENST00000540876 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
CLDN2-202ENST00000540876 UHRF1BP1LA0JNW5 1464 aa12.98□□□□□ -0.33
CLDN2-202ENST00000540876 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
CLDN2-202ENST00000540876 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
CLDN2-202ENST00000540876 ZCCHC11Q5TAX3 1644 aaKnown RBP12.97□□□□□ -0.33
CLDN2-202ENST00000540876 NCOA2Q15596 1464 aa12.97□□□□□ -0.33
CLDN2-202ENST00000540876 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.33
CLDN2-202ENST00000540876 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.33
CLDN2-202ENST00000540876 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
CLDN2-202ENST00000540876 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
CLDN2-202ENST00000540876 KIF14Q15058 1648 aa12.95□□□□□ -0.34
CLDN2-202ENST00000540876 RRBP1Q9P2E9 1410 aaKnown RBP12.94□□□□□ -0.34
CLDN2-202ENST00000540876 FAM69CQ0P6D2 419 aa12.92□□□□□ -0.34
CLDN2-202ENST00000540876 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
CLDN2-202ENST00000540876 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
CLDN2-202ENST00000540876 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
CLDN2-202ENST00000540876 EHBP1L1Q8N3D4 1523 aa12.91□□□□□ -0.34
CLDN2-202ENST00000540876 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
CLDN2-202ENST00000540876 PDE4AP27815 886 aa12.9□□□□□ -0.34
CLDN2-202ENST00000540876 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
CLDN2-202ENST00000540876 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
CLDN2-202ENST00000540876 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
CLDN2-202ENST00000540876 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
CLDN2-202ENST00000540876 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
CLDN2-202ENST00000540876 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLDN2-202ENST00000540876 MYOM3Q5VTT5 1437 aa12.87□□□□□ -0.35
CLDN2-202ENST00000540876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLDN2-202ENST00000540876 GPATCH8Q9UKJ3 1502 aaKnown RBP12.86□□□□□ -0.35
CLDN2-202ENST00000540876 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
CLDN2-202ENST00000540876 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
CLDN2-202ENST00000540876 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
CLDN2-202ENST00000540876 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
CLDN2-202ENST00000540876 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
CLDN2-202ENST00000540876 FGD6Q6ZV73 1430 aa12.85□□□□□ -0.35
CLDN2-202ENST00000540876 DDRGK1Q96HY6 314 aa12.85□□□□□ -0.35
CLDN2-202ENST00000540876 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
CLDN2-202ENST00000540876 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
CLDN2-202ENST00000540876 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
CLDN2-202ENST00000540876 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms