RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
LMO3-223ENST00000540590 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
LMO3-223ENST00000540590 PREX2Q70Z35 1606 aa19.15■□□□□ 0.66
LMO3-223ENST00000540590 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
LMO3-223ENST00000540590 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
LMO3-223ENST00000540590 CDC42BPBQ9Y5S2 1711 aa19.14■□□□□ 0.66
LMO3-223ENST00000540590 PTPN23Q9H3S7 1636 aa19.12■□□□□ 0.65
LMO3-223ENST00000540590 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
LMO3-223ENST00000540590 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
LMO3-223ENST00000540590 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
LMO3-223ENST00000540590 GLI2P10070 1586 aa19.08■□□□□ 0.65
LMO3-223ENST00000540590 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
LMO3-223ENST00000540590 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
LMO3-223ENST00000540590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
LMO3-223ENST00000540590 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
LMO3-223ENST00000540590 PLCH2O75038 1416 aa19.06■□□□□ 0.64
LMO3-223ENST00000540590 MAP3K4Q9Y6R4 1608 aa19.05■□□□□ 0.64
LMO3-223ENST00000540590 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
LMO3-223ENST00000540590 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
LMO3-223ENST00000540590 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
LMO3-223ENST00000540590 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
LMO3-223ENST00000540590 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
LMO3-223ENST00000540590 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
LMO3-223ENST00000540590 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
LMO3-223ENST00000540590 CD109Q6YHK3 1445 aa19■□□□□ 0.63
LMO3-223ENST00000540590 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
LMO3-223ENST00000540590 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
LMO3-223ENST00000540590 FAM69CQ0P6D2 419 aa18.98■□□□□ 0.63
LMO3-223ENST00000540590 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
LMO3-223ENST00000540590 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
LMO3-223ENST00000540590 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
LMO3-223ENST00000540590 FANCAO15360 1455 aa18.97■□□□□ 0.63
LMO3-223ENST00000540590 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
LMO3-223ENST00000540590 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
LMO3-223ENST00000540590 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
LMO3-223ENST00000540590 CROCC2H7BZ55 1655 aa18.95■□□□□ 0.62
LMO3-223ENST00000540590 ABCC1P33527 1531 aa18.95■□□□□ 0.62
LMO3-223ENST00000540590 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
LMO3-223ENST00000540590 SYCP2Q9BX26 1530 aa18.94■□□□□ 0.62
LMO3-223ENST00000540590 ARHGEF5Q12774 1597 aa18.93■□□□□ 0.62
LMO3-223ENST00000540590 ITGAEP38570 1179 aa18.92■□□□□ 0.62
LMO3-223ENST00000540590 DAPK1P53355 1430 aa18.91■□□□□ 0.62
LMO3-223ENST00000540590 MBD5Q9P267 1494 aa18.91■□□□□ 0.62
LMO3-223ENST00000540590 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
LMO3-223ENST00000540590 NEO1Q92859 1461 aa18.9■□□□□ 0.62
LMO3-223ENST00000540590 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
LMO3-223ENST00000540590 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
LMO3-223ENST00000540590 ABCC5O15440 1437 aa18.9■□□□□ 0.62
LMO3-223ENST00000540590 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
LMO3-223ENST00000540590 AKNAQ7Z591 1439 aa18.89■□□□□ 0.61
LMO3-223ENST00000540590 TEX14Q8IWB6 1497 aa18.89■□□□□ 0.61
LMO3-223ENST00000540590 HNRNPMP52272 730 aaKnown RBP eCLIP18.88■□□□□ 0.61
LMO3-223ENST00000540590 ADGRL1O94910 1474 aa18.88■□□□□ 0.61
LMO3-223ENST00000540590 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
LMO3-223ENST00000540590 ADGBQ8N7X0 1667 aa18.86■□□□□ 0.61
LMO3-223ENST00000540590 SCAPERQ9BY12 1400 aa18.84■□□□□ 0.61
LMO3-223ENST00000540590 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
LMO3-223ENST00000540590 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.61
LMO3-223ENST00000540590 MAST1Q9Y2H9 1570 aa18.82■□□□□ 0.6
LMO3-223ENST00000540590 HOXD11P31277 338 aaPredicted RBP18.82■□□□□ 0.6
LMO3-223ENST00000540590 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
LMO3-223ENST00000540590 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
LMO3-223ENST00000540590 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
LMO3-223ENST00000540590 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
LMO3-223ENST00000540590 ADGRL2O95490 1459 aa18.79■□□□□ 0.6
LMO3-223ENST00000540590 RICTORQ6R327 1708 aa18.79■□□□□ 0.6
LMO3-223ENST00000540590 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
LMO3-223ENST00000540590 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
LMO3-223ENST00000540590 TSPY4P0CV99 314 aa18.77■□□□□ 0.6
LMO3-223ENST00000540590 TSPY10P0CW01 314 aa18.77■□□□□ 0.6
LMO3-223ENST00000540590 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
LMO3-223ENST00000540590 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
LMO3-223ENST00000540590 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
LMO3-223ENST00000540590 KDM5CP41229 1560 aa18.76■□□□□ 0.59
LMO3-223ENST00000540590 INO80Q9ULG1 1556 aaPredicted RBP18.76■□□□□ 0.59
LMO3-223ENST00000540590 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
LMO3-223ENST00000540590 AFAP1Q8N556 730 aa18.75■□□□□ 0.59
LMO3-223ENST00000540590 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
LMO3-223ENST00000540590 FRMPD1Q5SYB0 1578 aa18.75■□□□□ 0.59
LMO3-223ENST00000540590 NAIPQ13075 1403 aa18.74■□□□□ 0.59
LMO3-223ENST00000540590 NCOA1Q15788 1441 aa18.74■□□□□ 0.59
LMO3-223ENST00000540590 ZFYVE16Q7Z3T8 1539 aa18.74■□□□□ 0.59
LMO3-223ENST00000540590 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
LMO3-223ENST00000540590 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
LMO3-223ENST00000540590 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
LMO3-223ENST00000540590 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
LMO3-223ENST00000540590 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
LMO3-223ENST00000540590 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
LMO3-223ENST00000540590 HECW2Q9P2P5 1572 aa18.72■□□□□ 0.59
LMO3-223ENST00000540590 SPAG9O60271 1321 aaKnown RBP18.72■□□□□ 0.59
LMO3-223ENST00000540590 KDM6BO15054 1643 aa18.7■□□□□ 0.58
LMO3-223ENST00000540590 RAB3GAP2Q9H2M9 1393 aa18.69■□□□□ 0.58
LMO3-223ENST00000540590 RAPGEF3O95398 923 aa18.69■□□□□ 0.58
LMO3-223ENST00000540590 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
LMO3-223ENST00000540590 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
LMO3-223ENST00000540590 ZMYM4Q5VZL5 1548 aa18.69■□□□□ 0.58
LMO3-223ENST00000540590 MLH3Q9UHC1 1453 aa18.68■□□□□ 0.58
LMO3-223ENST00000540590 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
LMO3-223ENST00000540590 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
LMO3-223ENST00000540590 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms