RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 TROQ12816 1431 aaPredicted RBP31.56■■■□□ 2.64
SOD2-212ENST00000540491 MADDQ8WXG6 1647 aa31.54■■■□□ 2.64
SOD2-212ENST00000540491 YEATS2Q9ULM3 1422 aa31.51■■■□□ 2.64
SOD2-212ENST00000540491 KIF14Q15058 1648 aa31.49■■■□□ 2.63
SOD2-212ENST00000540491 MYO5CQ9NQX4 1742 aa31.46■■■□□ 2.63
SOD2-212ENST00000540491 PCF11O94913 1555 aaKnown RBP31.46■■■□□ 2.63
SOD2-212ENST00000540491 ATP10AO60312 1499 aa31.45■■■□□ 2.62
SOD2-212ENST00000540491 ZNF518AQ6AHZ1 1483 aa31.44■■■□□ 2.62
SOD2-212ENST00000540491 CASKIN1Q8WXD9 1431 aa31.42■■■□□ 2.62
SOD2-212ENST00000540491 CCDC18Q5T9S5 1454 aa31.42■■■□□ 2.62
SOD2-212ENST00000540491 C9orf84Q5VXU9 1444 aa31.41■■■□□ 2.62
SOD2-212ENST00000540491 LMTK3Q96Q04 1460 aa31.41■■■□□ 2.62
SOD2-212ENST00000540491 RIMS1Q86UR5 1692 aaKnown RBP31.4■■■□□ 2.62
SOD2-212ENST00000540491 ARHGAP5Q13017 1502 aa31.39■■■□□ 2.62
SOD2-212ENST00000540491 MLECQ14165 292 aa31.35■■■□□ 2.61
SOD2-212ENST00000540491 AFAP1Q8N556 730 aa31.33■■■□□ 2.61
SOD2-212ENST00000540491 KDM5CP41229 1560 aa31.32■■■□□ 2.6
SOD2-212ENST00000540491 FBXO41Q8TF61 875 aa31.32■■■□□ 2.6
SOD2-212ENST00000540491 ARHGEF12Q9NZN5 1544 aa31.29■■■□□ 2.6
SOD2-212ENST00000540491 SIGLEC1Q9BZZ2 1709 aa31.29■■■□□ 2.6
SOD2-212ENST00000540491 FYCO1Q9BQS8 1478 aa31.28■■■□□ 2.6
SOD2-212ENST00000540491 MYT1LQ9UL68 1186 aa31.28■■■□□ 2.6
SOD2-212ENST00000540491 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
SOD2-212ENST00000540491 LRRIQ1Q96JM4 1722 aa31.26■■■□□ 2.59
SOD2-212ENST00000540491 FER1L4A9Z1Z3 1794 aa31.24■■■□□ 2.59
SOD2-212ENST00000540491 PLPPR3Q6T4P5 718 aa31.23■■■□□ 2.59
SOD2-212ENST00000540491 REREQ9P2R6 1566 aa31.22■■■□□ 2.59
SOD2-212ENST00000540491 PREX2Q70Z35 1606 aa31.21■■■□□ 2.59
SOD2-212ENST00000540491 CDC42BPBQ9Y5S2 1711 aa31.21■■■□□ 2.59
SOD2-212ENST00000540491 HSPA2P54652 639 aa31.2■■■□□ 2.59
SOD2-212ENST00000540491 ABCC1P33527 1531 aa31.18■■■□□ 2.58
SOD2-212ENST00000540491 TRAPPC8Q9Y2L5 1435 aa31.15■■■□□ 2.58
SOD2-212ENST00000540491 DIP2CQ9Y2E4 1556 aa31.15■■■□□ 2.58
SOD2-212ENST00000540491 AGLP35573 1532 aa31.14■■■□□ 2.58
SOD2-212ENST00000540491 ESF1Q9H501 851 aaKnown RBP31.11■■■□□ 2.57
SOD2-212ENST00000540491 CEBPAP49715 358 aaPredicted RBP31.09■■■□□ 2.57
SOD2-212ENST00000540491 SETD1BQ9UPS6 1966 aaKnown RBP31.08■■■□□ 2.57
SOD2-212ENST00000540491 ITSN2Q9NZM3 1697 aa31.07■■■□□ 2.56
SOD2-212ENST00000540491 DMRT2Q9Y5R5 561 aa31.07■■■□□ 2.56
SOD2-212ENST00000540491 GPATCH8Q9UKJ3 1502 aaKnown RBP31.07■■■□□ 2.56
SOD2-212ENST00000540491 ABCA6Q8N139 1617 aa31.06■■■□□ 2.56
SOD2-212ENST00000540491 CDC42BPAQ5VT25 1732 aa31.06■■■□□ 2.56
SOD2-212ENST00000540491 ZNF777Q9ULD5 760 aaPredicted RBP31.05■■■□□ 2.56
SOD2-212ENST00000540491 PLEKHH2Q8IVE3 1493 aa31.05■■■□□ 2.56
SOD2-212ENST00000540491 PREX1Q8TCU6 1659 aa31.05■■■□□ 2.56
SOD2-212ENST00000540491 UHRF1BP1Q6BDS2 1440 aa31.05■■■□□ 2.56
SOD2-212ENST00000540491 KIAA1107Q9UPP5 1409 aa31.05■■■□□ 2.56
SOD2-212ENST00000540491 CFDP1Q9UEE9 299 aaPredicted RBP31.03■■■□□ 2.56
SOD2-212ENST00000540491 CNTLNQ9NXG0 1405 aa31.03■■■□□ 2.56
SOD2-212ENST00000540491 MTUS2Q5JR59 1369 aa31.02■■■□□ 2.56
SOD2-212ENST00000540491 SPAG9O60271 1321 aaKnown RBP31.01■■■□□ 2.56
SOD2-212ENST00000540491 CCNB3Q8WWL7 1395 aa31.01■■■□□ 2.55
SOD2-212ENST00000540491 KIDINS220Q9ULH0 1771 aa31■■■□□ 2.55
SOD2-212ENST00000540491 SAMD9LQ8IVG5 1584 aa30.98■■■□□ 2.55
SOD2-212ENST00000540491 HNRNPMP52272 730 aaKnown RBP eCLIP30.96■■■□□ 2.556e-6■□□□□ 8.8
SOD2-212ENST00000540491 CERKQ8TCT0 537 aa30.96■■■□□ 2.55
SOD2-212ENST00000540491 SYCP2Q9BX26 1530 aa30.94■■■□□ 2.54
SOD2-212ENST00000540491 C3P01024 1663 aa30.87■■■□□ 2.53
SOD2-212ENST00000540491 PPP6R1Q9UPN7 881 aa30.87■■■□□ 2.53
SOD2-212ENST00000540491 NPATQ14207 1427 aa30.86■■■□□ 2.53
SOD2-212ENST00000540491 ATP7AQ04656 1500 aa30.86■■■□□ 2.53
SOD2-212ENST00000540491 EHBP1L1Q8N3D4 1523 aa30.84■■■□□ 2.53
SOD2-212ENST00000540491 A2MP01023 1474 aa30.83■■■□□ 2.53
SOD2-212ENST00000540491 CEP162Q5TB80 1403 aa30.83■■■□□ 2.53
SOD2-212ENST00000540491 ZMYM3Q14202 1370 aa30.83■■■□□ 2.53
SOD2-212ENST00000540491 PTPRTO14522 1441 aa30.82■■■□□ 2.52
SOD2-212ENST00000540491 MROH2AA6NES4 1674 aa30.8■■■□□ 2.52
SOD2-212ENST00000540491 INO80Q9ULG1 1556 aaPredicted RBP30.79■■■□□ 2.52
SOD2-212ENST00000540491 RSPH4AQ5TD94 716 aa30.79■■■□□ 2.52
SOD2-212ENST00000540491 STRCQ7RTU9 1775 aa30.79■■■□□ 2.52
SOD2-212ENST00000540491 RTEL1-TNFRSF6BF6WH68 1400 aa30.78■■■□□ 2.52
SOD2-212ENST00000540491 PLXNC1O60486 1568 aa30.78■■■□□ 2.52
SOD2-212ENST00000540491 MBD5Q9P267 1494 aa30.76■■■□□ 2.51
SOD2-212ENST00000540491 TIAM1Q13009 1591 aa30.75■■■□□ 2.51
SOD2-212ENST00000540491 ZNF644Q9H582 1327 aaPredicted RBP30.73■■■□□ 2.51
SOD2-212ENST00000540491 GGT6Q6P531 493 aa30.73■■■□□ 2.51
SOD2-212ENST00000540491 SUPT6HQ7KZ85 1726 aaKnown RBP30.72■■■□□ 2.51
SOD2-212ENST00000540491 NCOA1Q15788 1441 aa30.71■■■□□ 2.51
SOD2-212ENST00000540491 ADGBQ8N7X0 1667 aa30.68■■■□□ 2.5
SOD2-212ENST00000540491 DHX29Q7Z478 1369 aaKnown RBP30.67■■■□□ 2.5
SOD2-212ENST00000540491 NCOA2Q15596 1464 aa30.64■■■□□ 2.5
SOD2-212ENST00000540491 PTPRKQ15262 1439 aa30.64■■■□□ 2.49
SOD2-212ENST00000540491 CCDC141Q6ZP82 1450 aa30.63■■■□□ 2.49
SOD2-212ENST00000540491 PKD2Q13563 968 aa30.62■■■□□ 2.49
SOD2-212ENST00000540491 CLTCQ00610 1675 aaKnown RBP30.6■■■□□ 2.49
SOD2-212ENST00000540491 CAMSAP1Q5T5Y3 1602 aa30.6■■■□□ 2.49
SOD2-212ENST00000540491 PLA2R1Q13018 1463 aa30.59■■■□□ 2.49
SOD2-212ENST00000540491 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
SOD2-212ENST00000540491 TSPY4P0CV99 314 aa30.57■■■□□ 2.48
SOD2-212ENST00000540491 TSPY10P0CW01 314 aa30.57■■■□□ 2.48
SOD2-212ENST00000540491 FAM135AQ9P2D6 1515 aa30.57■■■□□ 2.48
SOD2-212ENST00000540491 CAMSAP2Q08AD1 1489 aa30.57■■■□□ 2.48
SOD2-212ENST00000540491 VPS8Q8N3P4 1428 aa30.56■■■□□ 2.48
SOD2-212ENST00000540491 KIF3BO15066 747 aa30.55■■■□□ 2.48
SOD2-212ENST00000540491 ZNF142P52746 1687 aaPredicted RBP30.52■■■□□ 2.48
SOD2-212ENST00000540491 LTBP4Q8N2S1 1624 aa30.52■■■□□ 2.48
SOD2-212ENST00000540491 CEP170BQ9Y4F5 1589 aaPredicted RBP30.51■■■□□ 2.47
SOD2-212ENST00000540491 MYO3AQ8NEV4 1616 aa30.5■■■□□ 2.47
SOD2-212ENST00000540491 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
SOD2-212ENST00000540491 ARHGEF5Q12774 1597 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms