RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 CFAP74Q9C0B2 1584 aa28.61■■■□□ 2.17
NEK2-205ENST00000540251 NEO1Q92859 1461 aa28.61■■■□□ 2.17
NEK2-205ENST00000540251 FANCAO15360 1455 aa28.56■■■□□ 2.16
NEK2-205ENST00000540251 MYOM3Q5VTT5 1437 aa28.56■■■□□ 2.16
NEK2-205ENST00000540251 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
NEK2-205ENST00000540251 EFCAB2Q5VUJ9 269 aa28.54■■■□□ 2.16
NEK2-205ENST00000540251 ARHGAP5Q13017 1502 aa28.54■■■□□ 2.16
NEK2-205ENST00000540251 CFDP1Q9UEE9 299 aaPredicted RBP28.49■■■□□ 2.15
NEK2-205ENST00000540251 AKNAQ7Z591 1439 aa28.49■■■□□ 2.15
NEK2-205ENST00000540251 SAMD9LQ8IVG5 1584 aa28.47■■■□□ 2.15
NEK2-205ENST00000540251 PLEKHH2Q8IVE3 1493 aa28.45■■■□□ 2.14
NEK2-205ENST00000540251 KIAA1107Q9UPP5 1409 aa28.45■■■□□ 2.14
NEK2-205ENST00000540251 FGD6Q6ZV73 1430 aa28.44■■■□□ 2.14
NEK2-205ENST00000540251 ABCC1P33527 1531 aa28.43■■■□□ 2.14
NEK2-205ENST00000540251 PPARGC1BQ86YN6 1023 aaKnown RBP28.42■■■□□ 2.14
NEK2-205ENST00000540251 TCOF1Q13428 1488 aaKnown RBP28.41■■■□□ 2.14
NEK2-205ENST00000540251 ADGRL1O94910 1474 aa28.41■■■□□ 2.14
NEK2-205ENST00000540251 PTPN23Q9H3S7 1636 aa28.4■■■□□ 2.14
NEK2-205ENST00000540251 CAMSAP2Q08AD1 1489 aa28.38■■■□□ 2.13
NEK2-205ENST00000540251 COL17A1Q9UMD9 1497 aaPredicted RBP28.38■■■□□ 2.13
NEK2-205ENST00000540251 RICTORQ6R327 1708 aa28.37■■■□□ 2.13
NEK2-205ENST00000540251 ARHGEF12Q9NZN5 1544 aa28.37■■■□□ 2.13
NEK2-205ENST00000540251 SCAPERQ9BY12 1400 aa28.36■■■□□ 2.13
NEK2-205ENST00000540251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.36■■■□□ 2.13
NEK2-205ENST00000540251 MBD5Q9P267 1494 aa28.36■■■□□ 2.13
NEK2-205ENST00000540251 RRBP1Q9P2E9 1410 aaKnown RBP28.35■■■□□ 2.13
NEK2-205ENST00000540251 KDM6BO15054 1643 aa28.35■■■□□ 2.13
NEK2-205ENST00000540251 DENND4BO75064 1496 aaPredicted RBP28.35■■■□□ 2.13
NEK2-205ENST00000540251 ZNF644Q9H582 1327 aaPredicted RBP28.33■■■□□ 2.13
NEK2-205ENST00000540251 ARHGEF5Q12774 1597 aa28.33■■■□□ 2.13
NEK2-205ENST00000540251 RSPH4AQ5TD94 716 aa28.32■■■□□ 2.12
NEK2-205ENST00000540251 SYCP2Q9BX26 1530 aa28.32■■■□□ 2.12
NEK2-205ENST00000540251 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
NEK2-205ENST00000540251 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
NEK2-205ENST00000540251 FRMPD1Q5SYB0 1578 aa28.31■■■□□ 2.12
NEK2-205ENST00000540251 KDM5CP41229 1560 aa28.3■■■□□ 2.12
NEK2-205ENST00000540251 ZNF518AQ6AHZ1 1483 aa28.3■■■□□ 2.12
NEK2-205ENST00000540251 ZMYM4Q5VZL5 1548 aa28.28■■■□□ 2.12
NEK2-205ENST00000540251 TRAPPC8Q9Y2L5 1435 aa28.27■■■□□ 2.12
NEK2-205ENST00000540251 HNRNPMP52272 730 aaKnown RBP eCLIP28.24■■■□□ 2.11
NEK2-205ENST00000540251 DNMT1P26358 1616 aaKnown RBP28.24■■■□□ 2.11
NEK2-205ENST00000540251 CCDC141Q6ZP82 1450 aa28.22■■■□□ 2.11
NEK2-205ENST00000540251 MAGI2Q86UL8 1455 aa28.22■■■□□ 2.11
NEK2-205ENST00000540251 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
NEK2-205ENST00000540251 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
NEK2-205ENST00000540251 AFAP1Q8N556 730 aa28.19■■■□□ 2.1
NEK2-205ENST00000540251 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
NEK2-205ENST00000540251 MAST1Q9Y2H9 1570 aa28.19■■■□□ 2.1
NEK2-205ENST00000540251 RTEL1-TNFRSF6BF6WH68 1400 aa28.17■■■□□ 2.1
NEK2-205ENST00000540251 ABCC5O15440 1437 aa28.17■■■□□ 2.1
NEK2-205ENST00000540251 SHANK2Q9UPX8 1470 aa28.16■■■□□ 2.1
NEK2-205ENST00000540251 HECW2Q9P2P5 1572 aa28.16■■■□□ 2.1
NEK2-205ENST00000540251 DAPK1P53355 1430 aa28.15■■■□□ 2.1
NEK2-205ENST00000540251 KIDINS220Q9ULH0 1771 aa28.15■■■□□ 2.1
NEK2-205ENST00000540251 INO80Q9ULG1 1556 aaPredicted RBP28.15■■■□□ 2.1
NEK2-205ENST00000540251 FAM50AQ14320 339 aaKnown RBP28.13■■■□□ 2.09
NEK2-205ENST00000540251 ZFYVE16Q7Z3T8 1539 aa28.1■■■□□ 2.09
NEK2-205ENST00000540251 TSPY4P0CV99 314 aa28.1■■■□□ 2.09
NEK2-205ENST00000540251 TSPY10P0CW01 314 aa28.1■■■□□ 2.09
NEK2-205ENST00000540251 ATP7AQ04656 1500 aa28.09■■■□□ 2.09
NEK2-205ENST00000540251 SPAG9O60271 1321 aaKnown RBP28.09■■■□□ 2.09
NEK2-205ENST00000540251 C9orf84Q5VXU9 1444 aa28.07■■■□□ 2.08
NEK2-205ENST00000540251 ARHGEF40Q8TER5 1519 aa28.06■■■□□ 2.08
NEK2-205ENST00000540251 PLXNC1O60486 1568 aa28.06■■■□□ 2.08
NEK2-205ENST00000540251 ADGRL2O95490 1459 aa28.06■■■□□ 2.08
NEK2-205ENST00000540251 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
NEK2-205ENST00000540251 ADGBQ8N7X0 1667 aa28.04■■■□□ 2.08
NEK2-205ENST00000540251 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
NEK2-205ENST00000540251 DIP2CQ9Y2E4 1556 aa28.04■■■□□ 2.08
NEK2-205ENST00000540251 ABCA6Q8N139 1617 aa28.03■■■□□ 2.08
NEK2-205ENST00000540251 YEATS2Q9ULM3 1422 aa28.02■■■□□ 2.08
NEK2-205ENST00000540251 ROCK1Q13464 1354 aa28.01■■■□□ 2.07
NEK2-205ENST00000540251 ATP10AO60312 1499 aa28■■■□□ 2.07
NEK2-205ENST00000540251 NCOA1Q15788 1441 aa27.99■■■□□ 2.07
NEK2-205ENST00000540251 ANKRD30AQ9BXX3 1397 aa27.96■■■□□ 2.07
NEK2-205ENST00000540251 AGLP35573 1532 aa27.92■■■□□ 2.06
NEK2-205ENST00000540251 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
NEK2-205ENST00000540251 BCORL1Q5H9F3 1711 aa27.91■■■□□ 2.06
NEK2-205ENST00000540251 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
NEK2-205ENST00000540251 A2MP01023 1474 aa27.91■■■□□ 2.06
NEK2-205ENST00000540251 CHIC2Q9UKJ5 165 aa27.88■■■□□ 2.05
NEK2-205ENST00000540251 MYT1LQ9UL68 1186 aa27.88■■■□□ 2.05
NEK2-205ENST00000540251 KIF15Q9NS87 1388 aa27.87■■■□□ 2.05
NEK2-205ENST00000540251 SIGLEC1Q9BZZ2 1709 aa27.87■■■□□ 2.05
NEK2-205ENST00000540251 EIF2AK4Q9P2K8 1649 aaKnown RBP27.86■■■□□ 2.05
NEK2-205ENST00000540251 ITGAEP38570 1179 aa27.85■■■□□ 2.05
NEK2-205ENST00000540251 TRIM26Q12899 539 aaPredicted RBP27.85■■■□□ 2.05
NEK2-205ENST00000540251 ERBINQ96RT1 1412 aa27.84■■■□□ 2.05
NEK2-205ENST00000540251 GCC2Q8IWJ2 1684 aa27.83■■■□□ 2.05
NEK2-205ENST00000540251 HFM1A2PYH4 1435 aa27.83■■■□□ 2.05
NEK2-205ENST00000540251 RRP7BPQ9NSQ0 103 aa27.82■■■□□ 2.04
NEK2-205ENST00000540251 NAIPQ13075 1403 aa27.79■■■□□ 2.04
NEK2-205ENST00000540251 ANKRD50Q9ULJ7 1429 aa27.77■■■□□ 2.04
NEK2-205ENST00000540251 RNF17Q9BXT8 1623 aaKnown RBP27.75■■■□□ 2.03
NEK2-205ENST00000540251 DEPDC5O75140 1603 aa27.74■■■□□ 2.03
NEK2-205ENST00000540251 PPP6R1Q9UPN7 881 aa27.69■■■□□ 2.02
NEK2-205ENST00000540251 FAM135AQ9P2D6 1515 aa27.69■■■□□ 2.02
NEK2-205ENST00000540251 MROH1Q8NDA8 1641 aa27.68■■■□□ 2.02
NEK2-205ENST00000540251 ADAMTSL3P82987 1691 aa27.67■■■□□ 2.02
NEK2-205ENST00000540251 KIF3BO15066 747 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms