RNA–Protein interactions for RNA: ENST00000540106.5

LMNTD1-208, Transcript of lamin tail domain containing 1, humanhuman

TSL 4

Gene LMNTD1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-208ENST00000540106 SOX12O15370 315 aa12.59□□□□□ -0.39
LMNTD1-208ENST00000540106 MS4A4AQ96JQ5 239 aa12.56□□□□□ -0.4
LMNTD1-208ENST00000540106 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
LMNTD1-208ENST00000540106 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
LMNTD1-208ENST00000540106 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
LMNTD1-208ENST00000540106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
LMNTD1-208ENST00000540106 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
LMNTD1-208ENST00000540106 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
LMNTD1-208ENST00000540106 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
LMNTD1-208ENST00000540106 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
LMNTD1-208ENST00000540106 RNF25Q96BH1 459 aaPredicted RBP12.45□□□□□ -0.42
LMNTD1-208ENST00000540106 NLRP6P59044 892 aa12.41□□□□□ -0.42
LMNTD1-208ENST00000540106 NUDT7P0C024 238 aa12.39□□□□□ -0.43
LMNTD1-208ENST00000540106 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
LMNTD1-208ENST00000540106 PBX2P40425 430 aa12.38□□□□□ -0.43
LMNTD1-208ENST00000540106 AXIN2Q9Y2T1 843 aa12.37□□□□□ -0.43
LMNTD1-208ENST00000540106 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
LMNTD1-208ENST00000540106 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
LMNTD1-208ENST00000540106 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
LMNTD1-208ENST00000540106 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
LMNTD1-208ENST00000540106 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
LMNTD1-208ENST00000540106 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
LMNTD1-208ENST00000540106 KIF3CO14782 793 aa12.3□□□□□ -0.44
LMNTD1-208ENST00000540106 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
LMNTD1-208ENST00000540106 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
LMNTD1-208ENST00000540106 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
LMNTD1-208ENST00000540106 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
LMNTD1-208ENST00000540106 ADGRD1Q6QNK2 874 aa12.25□□□□□ -0.45
LMNTD1-208ENST00000540106 SLC34A2O95436 690 aa12.24□□□□□ -0.45
LMNTD1-208ENST00000540106 ARHGAP33O14559 1287 aa12.22□□□□□ -0.45
LMNTD1-208ENST00000540106 TMC2Q8TDI7 906 aa12.22□□□□□ -0.45
LMNTD1-208ENST00000540106 STK25O00506 426 aa12.19□□□□□ -0.46
LMNTD1-208ENST00000540106 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
LMNTD1-208ENST00000540106 TK2O00142 265 aa12.13□□□□□ -0.47
LMNTD1-208ENST00000540106 PSEN2P49810 448 aa12.12□□□□□ -0.47
LMNTD1-208ENST00000540106 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
LMNTD1-208ENST00000540106 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
LMNTD1-208ENST00000540106 HRO43593 1189 aa12.11□□□□□ -0.47
LMNTD1-208ENST00000540106 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
LMNTD1-208ENST00000540106 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
LMNTD1-208ENST00000540106 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
LMNTD1-208ENST00000540106 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
LMNTD1-208ENST00000540106 PPP1R37O75864 691 aa12.02□□□□□ -0.49
LMNTD1-208ENST00000540106 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
LMNTD1-208ENST00000540106 PTPN5P54829 565 aa12□□□□□ -0.49
LMNTD1-208ENST00000540106 KCNH8Q96L42 1107 aa12□□□□□ -0.49
LMNTD1-208ENST00000540106 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
LMNTD1-208ENST00000540106 PLPP6Q8IY26 295 aa11.98□□□□□ -0.49
LMNTD1-208ENST00000540106 TBC1D12O60347 775 aa11.97□□□□□ -0.49
LMNTD1-208ENST00000540106 FOXK1P85037 733 aa11.95□□□□□ -0.5
LMNTD1-208ENST00000540106 IRX2Q9BZI1 471 aaPredicted RBP11.93□□□□□ -0.5
LMNTD1-208ENST00000540106 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
LMNTD1-208ENST00000540106 RGL2O15211 777 aa11.91□□□□□ -0.5
LMNTD1-208ENST00000540106 RGS20O76081 388 aa11.91□□□□□ -0.5
LMNTD1-208ENST00000540106 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
LMNTD1-208ENST00000540106 PKD2Q13563 968 aa11.9□□□□□ -0.5
LMNTD1-208ENST00000540106 DSG2Q14126 1118 aa11.89□□□□□ -0.51
LMNTD1-208ENST00000540106 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
LMNTD1-208ENST00000540106 GOLGA8CPA6NN73 597 aa11.85□□□□□ -0.51
LMNTD1-208ENST00000540106 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
LMNTD1-208ENST00000540106 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
LMNTD1-208ENST00000540106 A0A0G2JS52 829 aa11.83□□□□□ -0.52
LMNTD1-208ENST00000540106 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
LMNTD1-208ENST00000540106 WNT2BQ93097 391 aa11.81□□□□□ -0.52
LMNTD1-208ENST00000540106 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
LMNTD1-208ENST00000540106 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
LMNTD1-208ENST00000540106 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
LMNTD1-208ENST00000540106 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
LMNTD1-208ENST00000540106 PTPREP23469 700 aa11.78□□□□□ -0.52
LMNTD1-208ENST00000540106 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
LMNTD1-208ENST00000540106 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
LMNTD1-208ENST00000540106 FOSBP53539 338 aa11.73□□□□□ -0.53
LMNTD1-208ENST00000540106 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
LMNTD1-208ENST00000540106 Q6ZNB5 142 aa11.67□□□□□ -0.54
LMNTD1-208ENST00000540106 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
LMNTD1-208ENST00000540106 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
LMNTD1-208ENST00000540106 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
LMNTD1-208ENST00000540106 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
LMNTD1-208ENST00000540106 ADAM33Q9BZ11 813 aa11.64□□□□□ -0.55
LMNTD1-208ENST00000540106 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
LMNTD1-208ENST00000540106 EVI5O60447 810 aa11.62□□□□□ -0.55
LMNTD1-208ENST00000540106 ANKK1Q8NFD2 765 aa11.62□□□□□ -0.55
LMNTD1-208ENST00000540106 CRISPLD2Q9H0B8 497 aa11.62□□□□□ -0.55
LMNTD1-208ENST00000540106 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
LMNTD1-208ENST00000540106 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
LMNTD1-208ENST00000540106 RABGEF1Q9UJ41 708 aa11.58□□□□□ -0.56
LMNTD1-208ENST00000540106 BCAMP50895 628 aa11.57□□□□□ -0.56
LMNTD1-208ENST00000540106 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
LMNTD1-208ENST00000540106 PDE4AP27815 886 aa11.55□□□□□ -0.56
LMNTD1-208ENST00000540106 PROX2Q3B8N5 592 aa11.55□□□□□ -0.56
LMNTD1-208ENST00000540106 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
LMNTD1-208ENST00000540106 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
LMNTD1-208ENST00000540106 NCKAP5LQ9HCH0 1330 aa11.53□□□□□ -0.56
LMNTD1-208ENST00000540106 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
LMNTD1-208ENST00000540106 KCNC4Q03721 635 aa11.51□□□□□ -0.57
LMNTD1-208ENST00000540106 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
LMNTD1-208ENST00000540106 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
LMNTD1-208ENST00000540106 COL9A1P20849 921 aa11.5□□□□□ -0.57
LMNTD1-208ENST00000540106 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
LMNTD1-208ENST00000540106 WBP1LQ9NX94 342 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms