RNA–Protein interactions for RNA: ENST00000540091.1

SPPL3-205, Transcript of signal peptide peptidase like 3, humanhuman

TSL 4

Gene SPPL3, Length 531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-205ENST00000540091 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
SPPL3-205ENST00000540091 LHX8Q68G74 356 aa9.96□□□□□ -0.82
SPPL3-205ENST00000540091 SCUBE2Q9NQ36 999 aa9.96□□□□□ -0.82
SPPL3-205ENST00000540091 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
SPPL3-205ENST00000540091 CECR2Q9BXF3 1484 aa9.95□□□□□ -0.82
SPPL3-205ENST00000540091 PLCB2Q00722 1185 aa9.94□□□□□ -0.82
SPPL3-205ENST00000540091 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
SPPL3-205ENST00000540091 TMEM121BQ9BXQ6 578 aaPredicted RBP9.93□□□□□ -0.82
SPPL3-205ENST00000540091 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
SPPL3-205ENST00000540091 POTEB2H3BUK9 544 aa9.91□□□□□ -0.82
SPPL3-205ENST00000540091 PPP1R37O75864 691 aa9.91□□□□□ -0.82
SPPL3-205ENST00000540091 POTEJP0CG39 1038 aa9.85□□□□□ -0.83
SPPL3-205ENST00000540091 TMC2Q8TDI7 906 aa9.83□□□□□ -0.84
SPPL3-205ENST00000540091 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
SPPL3-205ENST00000540091 PDE4AP27815 886 aa9.8□□□□□ -0.84
SPPL3-205ENST00000540091 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
SPPL3-205ENST00000540091 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
SPPL3-205ENST00000540091 GPHNQ9NQX3 736 aaPredicted RBP9.77□□□□□ -0.85
SPPL3-205ENST00000540091 SNPHO15079 494 aa9.76□□□□□ -0.85
SPPL3-205ENST00000540091 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
SPPL3-205ENST00000540091 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
SPPL3-205ENST00000540091 C2orf72A6NCS6 295 aa9.74□□□□□ -0.85
SPPL3-205ENST00000540091 KIF3CO14782 793 aa9.74□□□□□ -0.85
SPPL3-205ENST00000540091 TMEM92Q6UXU6 159 aa9.73□□□□□ -0.85
SPPL3-205ENST00000540091 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
SPPL3-205ENST00000540091 FOXK1P85037 733 aa9.72□□□□□ -0.85
SPPL3-205ENST00000540091 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
SPPL3-205ENST00000540091 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
SPPL3-205ENST00000540091 NCAPD3P42695 1498 aa9.72□□□□□ -0.85
SPPL3-205ENST00000540091 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
SPPL3-205ENST00000540091 NCKAP5LQ9HCH0 1330 aa9.71□□□□□ -0.86
SPPL3-205ENST00000540091 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
SPPL3-205ENST00000540091 SMARCA2P51531 1590 aa9.69□□□□□ -0.86
SPPL3-205ENST00000540091 MFSD10Q14728 455 aa9.69□□□□□ -0.86
SPPL3-205ENST00000540091 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
SPPL3-205ENST00000540091 SMARCA4P51532 1647 aa9.68□□□□□ -0.86
SPPL3-205ENST00000540091 HMGXB3Q12766 1538 aa9.68□□□□□ -0.86
SPPL3-205ENST00000540091 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
SPPL3-205ENST00000540091 VSIG10Q8N0Z9 540 aa9.68□□□□□ -0.86
SPPL3-205ENST00000540091 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
SPPL3-205ENST00000540091 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
SPPL3-205ENST00000540091 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
SPPL3-205ENST00000540091 DSG2Q14126 1118 aa9.66□□□□□ -0.86
SPPL3-205ENST00000540091 PEG3Q9GZU2 1588 aa9.64□□□□□ -0.87
SPPL3-205ENST00000540091 ZNF710Q8N1W2 664 aa9.64□□□□□ -0.87
SPPL3-205ENST00000540091 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
SPPL3-205ENST00000540091 SLC34A2O95436 690 aa9.62□□□□□ -0.87
SPPL3-205ENST00000540091 TBC1D12O60347 775 aa9.61□□□□□ -0.87
SPPL3-205ENST00000540091 SLC24A1O60721 1099 aa9.61□□□□□ -0.87
SPPL3-205ENST00000540091 E2F4Q16254 413 aa9.6□□□□□ -0.87
SPPL3-205ENST00000540091 HOXB3P14651 431 aaPredicted RBP9.59□□□□□ -0.87
SPPL3-205ENST00000540091 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
SPPL3-205ENST00000540091 BAZ1BQ9UIG0 1483 aaKnown RBP9.59□□□□□ -0.87
SPPL3-205ENST00000540091 CAMK2BQ13554 666 aa9.58□□□□□ -0.88
SPPL3-205ENST00000540091 CUX2O14529 1486 aa9.56□□□□□ -0.88
SPPL3-205ENST00000540091 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
SPPL3-205ENST00000540091 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
SPPL3-205ENST00000540091 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
SPPL3-205ENST00000540091 ERCC6Q03468 1493 aa9.53□□□□□ -0.88
SPPL3-205ENST00000540091 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
SPPL3-205ENST00000540091 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
SPPL3-205ENST00000540091 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
SPPL3-205ENST00000540091 MROH2BQ7Z745 1585 aa9.53□□□□□ -0.88
SPPL3-205ENST00000540091 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
SPPL3-205ENST00000540091 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
SPPL3-205ENST00000540091 ST18O60284 1047 aa9.51□□□□□ -0.89
SPPL3-205ENST00000540091 UPF1Q92900 1129 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPPL3-205ENST00000540091 ARIH1Q9Y4X5 557 aaPredicted RBP9.51□□□□□ -0.89
SPPL3-205ENST00000540091 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
SPPL3-205ENST00000540091 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
SPPL3-205ENST00000540091 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
SPPL3-205ENST00000540091 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
SPPL3-205ENST00000540091 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
SPPL3-205ENST00000540091 SPDYE16A6NNV3 312 aaPredicted RBP9.47□□□□□ -0.89
SPPL3-205ENST00000540091 DPYSL4O14531 572 aa9.46□□□□□ -0.9
SPPL3-205ENST00000540091 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
SPPL3-205ENST00000540091 PSDA5PKW4 1024 aaPredicted RBP9.45□□□□□ -0.9
SPPL3-205ENST00000540091 NESP48681 1621 aa9.45□□□□□ -0.9
SPPL3-205ENST00000540091 EVI5O60447 810 aa9.44□□□□□ -0.9
SPPL3-205ENST00000540091 NUDT7P0C024 238 aa9.44□□□□□ -0.9
SPPL3-205ENST00000540091 EMP3P54852 163 aa9.44□□□□□ -0.9
SPPL3-205ENST00000540091 PDS5BQ9NTI5 1447 aa9.44□□□□□ -0.9
SPPL3-205ENST00000540091 THOC2Q8NI27 1593 aaKnown RBP9.42□□□□□ -0.9
SPPL3-205ENST00000540091 PDIA6Q15084 440 aa9.42□□□□□ -0.9
SPPL3-205ENST00000540091 ERBB3P21860 1342 aa9.41□□□□□ -0.9
SPPL3-205ENST00000540091 ANO8Q9HCE9 1232 aaPredicted RBP9.41□□□□□ -0.9
SPPL3-205ENST00000540091 WIZO95785 1651 aa9.41□□□□□ -0.9
SPPL3-205ENST00000540091 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
SPPL3-205ENST00000540091 KDM4FA0A1W2PPD8 638 aa9.4□□□□□ -0.9
SPPL3-205ENST00000540091 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■■□□□ 12.5
SPPL3-205ENST00000540091 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
SPPL3-205ENST00000540091 MARVELD3Q96A59 401 aa9.39□□□□□ -0.91
SPPL3-205ENST00000540091 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
SPPL3-205ENST00000540091 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
SPPL3-205ENST00000540091 RSF1Q96T23 1441 aaPredicted RBP9.37□□□□□ -0.91
SPPL3-205ENST00000540091 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
SPPL3-205ENST00000540091 PTGER2P43116 358 aa9.36□□□□□ -0.91
SPPL3-205ENST00000540091 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
SPPL3-205ENST00000540091 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
SPPL3-205ENST00000540091 NBR1Q14596 966 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms