RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
GTF2H3-208ENST00000539994 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
GTF2H3-208ENST00000539994 ERBB3P21860 1342 aa9.35□□□□□ -0.91
GTF2H3-208ENST00000539994 VARS2Q5ST30 1063 aaKnown RBP9.35□□□□□ -0.91
GTF2H3-208ENST00000539994 STK24Q9Y6E0 443 aa9.34□□□□□ -0.91
GTF2H3-208ENST00000539994 PKD2Q13563 968 aa9.32□□□□□ -0.92
GTF2H3-208ENST00000539994 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■■■□□ 18.6
GTF2H3-208ENST00000539994 RGL2O15211 777 aa9.31□□□□□ -0.92
GTF2H3-208ENST00000539994 NLRP6P59044 892 aa9.31□□□□□ -0.92
GTF2H3-208ENST00000539994 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
GTF2H3-208ENST00000539994 STK25O00506 426 aa9.29□□□□□ -0.92
GTF2H3-208ENST00000539994 RIMBP2O15034 1052 aa9.29□□□□□ -0.92
GTF2H3-208ENST00000539994 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
GTF2H3-208ENST00000539994 ZSWIM6Q9HCJ5 1215 aa9.29□□□□□ -0.92
GTF2H3-208ENST00000539994 KIF3CO14782 793 aa9.28□□□□□ -0.92
GTF2H3-208ENST00000539994 C2orf72A6NCS6 295 aa9.25□□□□□ -0.93
GTF2H3-208ENST00000539994 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
GTF2H3-208ENST00000539994 PPP1R37O75864 691 aa9.22□□□□□ -0.93
GTF2H3-208ENST00000539994 ZNF316A6NFI3 1004 aaPredicted RBP9.2□□□□□ -0.94
GTF2H3-208ENST00000539994 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
GTF2H3-208ENST00000539994 RNF166Q96A37 237 aaPredicted RBP9.19□□□□□ -0.94
GTF2H3-208ENST00000539994 NUDT7P0C024 238 aa9.18□□□□□ -0.94
GTF2H3-208ENST00000539994 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
GTF2H3-208ENST00000539994 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
GTF2H3-208ENST00000539994 LHX6Q9UPM6 363 aa9.14□□□□□ -0.95
GTF2H3-208ENST00000539994 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
GTF2H3-208ENST00000539994 SLC34A2O95436 690 aa9.12□□□□□ -0.95
GTF2H3-208ENST00000539994 ANKRD13DQ6ZTN6 518 aa9.12□□□□□ -0.95
GTF2H3-208ENST00000539994 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
GTF2H3-208ENST00000539994 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
GTF2H3-208ENST00000539994 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
GTF2H3-208ENST00000539994 TMC2Q8TDI7 906 aa9.09□□□□□ -0.95
GTF2H3-208ENST00000539994 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
GTF2H3-208ENST00000539994 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
GTF2H3-208ENST00000539994 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
GTF2H3-208ENST00000539994 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
GTF2H3-208ENST00000539994 PTGER2P43116 358 aa9.02□□□□□ -0.97
GTF2H3-208ENST00000539994 NKX1-1Q15270 411 aaPredicted RBP9.02□□□□□ -0.97
GTF2H3-208ENST00000539994 PTCD2Q8WV60 388 aaKnown RBP9.02□□□□□ -0.97
GTF2H3-208ENST00000539994 PBX2P40425 430 aa9.01□□□□□ -0.97
GTF2H3-208ENST00000539994 FOXK1P85037 733 aa9.01□□□□□ -0.97
GTF2H3-208ENST00000539994 DSG2Q14126 1118 aa9.01□□□□□ -0.97
GTF2H3-208ENST00000539994 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
GTF2H3-208ENST00000539994 GPHNQ9NQX3 736 aaPredicted RBP9□□□□□ -0.97
GTF2H3-208ENST00000539994 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
GTF2H3-208ENST00000539994 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
GTF2H3-208ENST00000539994 PSEN2P49810 448 aa8.97□□□□□ -0.97
GTF2H3-208ENST00000539994 ADGRD1Q6QNK2 874 aa8.96□□□□□ -0.98
GTF2H3-208ENST00000539994 ARHGAP33O14559 1287 aa8.95□□□□□ -0.98
GTF2H3-208ENST00000539994 HRO43593 1189 aa8.93□□□□□ -0.98
GTF2H3-208ENST00000539994 CRISPLD2Q9H0B8 497 aa8.91□□□□□ -0.98
GTF2H3-208ENST00000539994 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
GTF2H3-208ENST00000539994 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
GTF2H3-208ENST00000539994 PSDA5PKW4 1024 aaPredicted RBP8.89□□□□□ -0.99
GTF2H3-208ENST00000539994 NCKAP5LQ9HCH0 1330 aa8.88□□□□□ -0.99
GTF2H3-208ENST00000539994 TK2O00142 265 aa8.87□□□□□ -0.99
GTF2H3-208ENST00000539994 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
GTF2H3-208ENST00000539994 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
GTF2H3-208ENST00000539994 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
GTF2H3-208ENST00000539994 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
GTF2H3-208ENST00000539994 TBC1D12O60347 775 aa8.83□□□□□ -1
GTF2H3-208ENST00000539994 HCSTQ9UBK5 93 aa8.83□□□□□ -1
GTF2H3-208ENST00000539994 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
GTF2H3-208ENST00000539994 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
GTF2H3-208ENST00000539994 KCTD12Q96CX2 325 aaKnown RBP8.81□□□□□ -1
GTF2H3-208ENST00000539994 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
GTF2H3-208ENST00000539994 FOSBP53539 338 aa8.79□□□□□ -1
GTF2H3-208ENST00000539994 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
GTF2H3-208ENST00000539994 ANO8Q9HCE9 1232 aaPredicted RBP8.77□□□□□ -1.01
GTF2H3-208ENST00000539994 PDE4AP27815 886 aa8.76□□□□□ -1.01
GTF2H3-208ENST00000539994 EMILIN3Q9NT22 766 aa8.76□□□□□ -1.01
GTF2H3-208ENST00000539994 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
GTF2H3-208ENST00000539994 EVI5O60447 810 aa8.75□□□□□ -1.01
GTF2H3-208ENST00000539994 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
GTF2H3-208ENST00000539994 LARP6Q9BRS8 491 aaKnown RBP8.75□□□□□ -1.01
GTF2H3-208ENST00000539994 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
GTF2H3-208ENST00000539994 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
GTF2H3-208ENST00000539994 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
GTF2H3-208ENST00000539994 MFSD10Q14728 455 aa8.73□□□□□ -1.01
GTF2H3-208ENST00000539994 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
GTF2H3-208ENST00000539994 PTPN5P54829 565 aa8.72□□□□□ -1.01
GTF2H3-208ENST00000539994 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
GTF2H3-208ENST00000539994 JPH4Q96JJ6 628 aa8.72□□□□□ -1.01
GTF2H3-208ENST00000539994 PTPREP23469 700 aa8.7□□□□□ -1.02
GTF2H3-208ENST00000539994 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
GTF2H3-208ENST00000539994 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
GTF2H3-208ENST00000539994 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
GTF2H3-208ENST00000539994 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
GTF2H3-208ENST00000539994 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
GTF2H3-208ENST00000539994 COL9A1P20849 921 aa8.67□□□□□ -1.02
GTF2H3-208ENST00000539994 MAP3K9P80192 1104 aa8.66□□□□□ -1.02
GTF2H3-208ENST00000539994 PROX2Q3B8N5 592 aa8.65□□□□□ -1.02
GTF2H3-208ENST00000539994 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
GTF2H3-208ENST00000539994 WNT2BQ93097 391 aa8.64□□□□□ -1.03
GTF2H3-208ENST00000539994 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
GTF2H3-208ENST00000539994 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
GTF2H3-208ENST00000539994 ABCC9O60706 1549 aa8.62□□□□□ -1.03
GTF2H3-208ENST00000539994 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
GTF2H3-208ENST00000539994 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
GTF2H3-208ENST00000539994 DPYSL4O14531 572 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms