RNA–Protein interactions for RNA: ENST00000539534.5

LMO3-221, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-221ENST00000539534 RRBP1Q9P2E9 1410 aaKnown RBP19.06■□□□□ 0.64
LMO3-221ENST00000539534 MYO5CQ9NQX4 1742 aa19.05■□□□□ 0.64
LMO3-221ENST00000539534 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
LMO3-221ENST00000539534 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
LMO3-221ENST00000539534 PHF23Q9BUL5 403 aaPredicted RBP19.03■□□□□ 0.64
LMO3-221ENST00000539534 FGD6Q6ZV73 1430 aa19.02■□□□□ 0.64
LMO3-221ENST00000539534 FANCAO15360 1455 aa19.01■□□□□ 0.63
LMO3-221ENST00000539534 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
LMO3-221ENST00000539534 NEO1Q92859 1461 aa19.01■□□□□ 0.63
LMO3-221ENST00000539534 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
LMO3-221ENST00000539534 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
LMO3-221ENST00000539534 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
LMO3-221ENST00000539534 CFAP74Q9C0B2 1584 aa18.98■□□□□ 0.63
LMO3-221ENST00000539534 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
LMO3-221ENST00000539534 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
LMO3-221ENST00000539534 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
LMO3-221ENST00000539534 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
LMO3-221ENST00000539534 CDC42BPBQ9Y5S2 1711 aa18.97■□□□□ 0.63
LMO3-221ENST00000539534 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
LMO3-221ENST00000539534 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.63
LMO3-221ENST00000539534 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
LMO3-221ENST00000539534 MBD5Q9P267 1494 aa18.92■□□□□ 0.62
LMO3-221ENST00000539534 ARHGEF12Q9NZN5 1544 aa18.92■□□□□ 0.62
LMO3-221ENST00000539534 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
LMO3-221ENST00000539534 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
LMO3-221ENST00000539534 CAMSAP2Q08AD1 1489 aa18.91■□□□□ 0.62
LMO3-221ENST00000539534 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
LMO3-221ENST00000539534 ADGRL1O94910 1474 aa18.9■□□□□ 0.62
LMO3-221ENST00000539534 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
LMO3-221ENST00000539534 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
LMO3-221ENST00000539534 ABCC1P33527 1531 aa18.89■□□□□ 0.61
LMO3-221ENST00000539534 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
LMO3-221ENST00000539534 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
LMO3-221ENST00000539534 TSPOAP1O95153 1857 aa18.86■□□□□ 0.61
LMO3-221ENST00000539534 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
LMO3-221ENST00000539534 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
LMO3-221ENST00000539534 RAPGEF3O95398 923 aa18.85■□□□□ 0.61
LMO3-221ENST00000539534 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
LMO3-221ENST00000539534 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
LMO3-221ENST00000539534 ABCC5O15440 1437 aa18.84■□□□□ 0.61
LMO3-221ENST00000539534 POGZQ7Z3K3 1410 aa18.84■□□□□ 0.61
LMO3-221ENST00000539534 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
LMO3-221ENST00000539534 SHANK2Q9UPX8 1470 aa18.83■□□□□ 0.6
LMO3-221ENST00000539534 ZNF518AQ6AHZ1 1483 aa18.82■□□□□ 0.6
LMO3-221ENST00000539534 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
LMO3-221ENST00000539534 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
LMO3-221ENST00000539534 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
LMO3-221ENST00000539534 DAPK1P53355 1430 aa18.8■□□□□ 0.6
LMO3-221ENST00000539534 CROCC2H7BZ55 1655 aa18.79■□□□□ 0.6
LMO3-221ENST00000539534 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
LMO3-221ENST00000539534 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
LMO3-221ENST00000539534 SPAG9O60271 1321 aaKnown RBP18.77■□□□□ 0.6
LMO3-221ENST00000539534 KDM5CP41229 1560 aa18.77■□□□□ 0.6
LMO3-221ENST00000539534 RTEL1-TNFRSF6BF6WH68 1400 aa18.77■□□□□ 0.6
LMO3-221ENST00000539534 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
LMO3-221ENST00000539534 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
LMO3-221ENST00000539534 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
LMO3-221ENST00000539534 ROCK1Q13464 1354 aa18.75■□□□□ 0.59
LMO3-221ENST00000539534 MAGI2Q86UL8 1455 aa18.75■□□□□ 0.59
LMO3-221ENST00000539534 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
LMO3-221ENST00000539534 ADGBQ8N7X0 1667 aa18.74■□□□□ 0.59
LMO3-221ENST00000539534 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
LMO3-221ENST00000539534 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
LMO3-221ENST00000539534 RICTORQ6R327 1708 aa18.73■□□□□ 0.59
LMO3-221ENST00000539534 KDM6BO15054 1643 aa18.73■□□□□ 0.59
LMO3-221ENST00000539534 ITGAEP38570 1179 aa18.71■□□□□ 0.59
LMO3-221ENST00000539534 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
LMO3-221ENST00000539534 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
LMO3-221ENST00000539534 PLXNC1O60486 1568 aa18.69■□□□□ 0.58
LMO3-221ENST00000539534 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
LMO3-221ENST00000539534 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
LMO3-221ENST00000539534 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
LMO3-221ENST00000539534 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
LMO3-221ENST00000539534 ATP7AQ04656 1500 aa18.67■□□□□ 0.58
LMO3-221ENST00000539534 INO80Q9ULG1 1556 aaPredicted RBP18.67■□□□□ 0.58
LMO3-221ENST00000539534 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
LMO3-221ENST00000539534 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
LMO3-221ENST00000539534 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
LMO3-221ENST00000539534 HRCP23327 699 aa18.65■□□□□ 0.58
LMO3-221ENST00000539534 KIDINS220Q9ULH0 1771 aa18.64■□□□□ 0.57
LMO3-221ENST00000539534 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
LMO3-221ENST00000539534 ATP10AO60312 1499 aa18.64■□□□□ 0.57
LMO3-221ENST00000539534 MYT1LQ9UL68 1186 aa18.63■□□□□ 0.57
LMO3-221ENST00000539534 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
LMO3-221ENST00000539534 KIF15Q9NS87 1388 aa18.63■□□□□ 0.57
LMO3-221ENST00000539534 NAIPQ13075 1403 aa18.6■□□□□ 0.57
LMO3-221ENST00000539534 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
LMO3-221ENST00000539534 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
LMO3-221ENST00000539534 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
LMO3-221ENST00000539534 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
LMO3-221ENST00000539534 A2MP01023 1474 aa18.58■□□□□ 0.57
LMO3-221ENST00000539534 ABCA6Q8N139 1617 aa18.57■□□□□ 0.56
LMO3-221ENST00000539534 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
LMO3-221ENST00000539534 ERBINQ96RT1 1412 aa18.56■□□□□ 0.56
LMO3-221ENST00000539534 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
LMO3-221ENST00000539534 EIF2AK4Q9P2K8 1649 aaKnown RBP18.54■□□□□ 0.56
LMO3-221ENST00000539534 AGLP35573 1532 aa18.54■□□□□ 0.56
LMO3-221ENST00000539534 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.55
LMO3-221ENST00000539534 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
LMO3-221ENST00000539534 KIF3BO15066 747 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms