RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 ZNF777Q9ULD5 760 aaPredicted RBP37.91■■■■□ 3.66
KLHL42-202ENST00000539176 CAMSAP2Q08AD1 1489 aa37.88■■■■□ 3.65
KLHL42-202ENST00000539176 CDC42BPBQ9Y5S2 1711 aa37.87■■■■□ 3.65
KLHL42-202ENST00000539176 PREX2Q70Z35 1606 aa37.87■■■■□ 3.65
KLHL42-202ENST00000539176 MYO5CQ9NQX4 1742 aa37.82■■■■□ 3.65
KLHL42-202ENST00000539176 DNMT1P26358 1616 aaKnown RBP37.76■■■■□ 3.64
KLHL42-202ENST00000539176 ARHGAP5Q13017 1502 aa37.75■■■■□ 3.63
KLHL42-202ENST00000539176 CHIC2Q9UKJ5 165 aa37.75■■■■□ 3.63
KLHL42-202ENST00000539176 DAPK1P53355 1430 aa37.74■■■■□ 3.63
KLHL42-202ENST00000539176 SAMD9LQ8IVG5 1584 aa37.72■■■■□ 3.63
KLHL42-202ENST00000539176 ABCC5O15440 1437 aa37.72■■■■□ 3.63
KLHL42-202ENST00000539176 SETD5Q9C0A6 1442 aa37.7■■■■□ 3.63
KLHL42-202ENST00000539176 RAB3GAP2Q9H2M9 1393 aa37.69■■■■□ 3.62
KLHL42-202ENST00000539176 ABCA9Q8IUA7 1624 aa37.68■■■■□ 3.62
KLHL42-202ENST00000539176 PLCH2O75038 1416 aa37.68■■■■□ 3.62
KLHL42-202ENST00000539176 CLSPNQ9HAW4 1339 aa37.66■■■■□ 3.62
KLHL42-202ENST00000539176 HNRNPMP52272 730 aaKnown RBP eCLIP37.62■■■■□ 3.61
KLHL42-202ENST00000539176 RRP7BPQ9NSQ0 103 aa37.62■■■■□ 3.61
KLHL42-202ENST00000539176 CROCC2H7BZ55 1655 aa37.61■■■■□ 3.61
KLHL42-202ENST00000539176 MAPKBP1O60336 1514 aa37.61■■■■□ 3.61
KLHL42-202ENST00000539176 HFM1A2PYH4 1435 aa37.59■■■■□ 3.61
KLHL42-202ENST00000539176 NAIPQ13075 1403 aa37.58■■■■□ 3.61
KLHL42-202ENST00000539176 SYCP2Q9BX26 1530 aa37.57■■■■□ 3.6
KLHL42-202ENST00000539176 MBD5Q9P267 1494 aa37.55■■■■□ 3.6
KLHL42-202ENST00000539176 EFCAB2Q5VUJ9 269 aa37.54■■■■□ 3.6
KLHL42-202ENST00000539176 AKNAQ7Z591 1439 aa37.54■■■■□ 3.6
KLHL42-202ENST00000539176 ARHGEF5Q12774 1597 aa37.52■■■■□ 3.6
KLHL42-202ENST00000539176 ARAP3Q8WWN8 1544 aa37.52■■■■□ 3.6
KLHL42-202ENST00000539176 GCC2Q8IWJ2 1684 aa37.51■■■■□ 3.6
KLHL42-202ENST00000539176 DHX57Q6P158 1386 aaKnown RBP37.51■■■■□ 3.6
KLHL42-202ENST00000539176 ARHGEF12Q9NZN5 1544 aa37.49■■■■□ 3.59
KLHL42-202ENST00000539176 ADGBQ8N7X0 1667 aa37.49■■■■□ 3.59
KLHL42-202ENST00000539176 ROCK1Q13464 1354 aa37.47■■■■□ 3.59
KLHL42-202ENST00000539176 KDM6BO15054 1643 aa37.45■■■■□ 3.59
KLHL42-202ENST00000539176 FANCAO15360 1455 aa37.45■■■■□ 3.59
KLHL42-202ENST00000539176 ABCC1P33527 1531 aa37.45■■■■□ 3.59
KLHL42-202ENST00000539176 CCDC141Q6ZP82 1450 aa37.45■■■■□ 3.59
KLHL42-202ENST00000539176 PLEKHH2Q8IVE3 1493 aa37.45■■■■□ 3.59
KLHL42-202ENST00000539176 C9orf84Q5VXU9 1444 aa37.44■■■■□ 3.58
KLHL42-202ENST00000539176 CD109Q6YHK3 1445 aa37.44■■■■□ 3.58
KLHL42-202ENST00000539176 KIAA1107Q9UPP5 1409 aa37.44■■■■□ 3.58
KLHL42-202ENST00000539176 SHANK2Q9UPX8 1470 aa37.43■■■■□ 3.58
KLHL42-202ENST00000539176 ADGRL2O95490 1459 aa37.4■■■■□ 3.58
KLHL42-202ENST00000539176 NCOA1Q15788 1441 aa37.39■■■■□ 3.58
KLHL42-202ENST00000539176 TSPY4P0CV99 314 aa37.39■■■■□ 3.58
KLHL42-202ENST00000539176 TSPY10P0CW01 314 aa37.39■■■■□ 3.58
KLHL42-202ENST00000539176 TRAPPC8Q9Y2L5 1435 aa37.35■■■■□ 3.57
KLHL42-202ENST00000539176 ANKRD30AQ9BXX3 1397 aa37.35■■■■□ 3.57
KLHL42-202ENST00000539176 RSPH4AQ5TD94 716 aa37.34■■■■□ 3.57
KLHL42-202ENST00000539176 DIP2BQ9P265 1576 aa37.33■■■■□ 3.57
KLHL42-202ENST00000539176 MAP3K4Q9Y6R4 1608 aa37.31■■■■□ 3.56
KLHL42-202ENST00000539176 GLI2P10070 1586 aa37.31■■■■□ 3.56
KLHL42-202ENST00000539176 ADGRL1O94910 1474 aa37.3■■■■□ 3.56
KLHL42-202ENST00000539176 FAM69CQ0P6D2 419 aa37.28■■■■□ 3.56
KLHL42-202ENST00000539176 MAST1Q9Y2H9 1570 aa37.27■■■■□ 3.56
KLHL42-202ENST00000539176 SCAPERQ9BY12 1400 aa37.26■■■■□ 3.56
KLHL42-202ENST00000539176 AFAP1Q8N556 730 aa37.24■■■■□ 3.55
KLHL42-202ENST00000539176 CFAP74Q9C0B2 1584 aa37.23■■■■□ 3.55
KLHL42-202ENST00000539176 KIF15Q9NS87 1388 aa37.21■■■■□ 3.55
KLHL42-202ENST00000539176 TRIM52Q96A61 297 aa37.18■■■■□ 3.54
KLHL42-202ENST00000539176 TSPOAP1O95153 1857 aa37.17■■■■□ 3.54
KLHL42-202ENST00000539176 ANKRD50Q9ULJ7 1429 aa37.16■■■■□ 3.54
KLHL42-202ENST00000539176 KIF13AQ9H1H9 1805 aa37.14■■■■□ 3.54
KLHL42-202ENST00000539176 PLXNC1O60486 1568 aa37.14■■■■□ 3.54
KLHL42-202ENST00000539176 SPAG9O60271 1321 aaKnown RBP37.13■■■■□ 3.54
KLHL42-202ENST00000539176 NEO1Q92859 1461 aa37.12■■■■□ 3.53
KLHL42-202ENST00000539176 DNAJC5Q9H3Z4 198 aa37.11■■■■□ 3.53
KLHL42-202ENST00000539176 ZFYVE16Q7Z3T8 1539 aa37.1■■■■□ 3.53
KLHL42-202ENST00000539176 PPRC1Q5VV67 1664 aaKnown RBP37.08■■■■□ 3.53
KLHL42-202ENST00000539176 INO80Q9ULG1 1556 aaPredicted RBP37.06■■■■□ 3.52
KLHL42-202ENST00000539176 ZNF316A6NFI3 1004 aaPredicted RBP37.05■■■■□ 3.52
KLHL42-202ENST00000539176 ATP7AQ04656 1500 aa37.04■■■■□ 3.52
KLHL42-202ENST00000539176 RTEL1-TNFRSF6BF6WH68 1400 aa37.03■■■■□ 3.52
KLHL42-202ENST00000539176 POGZQ7Z3K3 1410 aa37.03■■■■□ 3.52
KLHL42-202ENST00000539176 ZNF518AQ6AHZ1 1483 aa37.03■■■■□ 3.52
KLHL42-202ENST00000539176 DENND4BO75064 1496 aaPredicted RBP37.01■■■■□ 3.52
KLHL42-202ENST00000539176 MYT1LQ9UL68 1186 aa37.01■■■■□ 3.52
KLHL42-202ENST00000539176 DUOX2Q9NRD8 1548 aa36.99■■■■□ 3.51
KLHL42-202ENST00000539176 MPHOSPH9Q99550 1183 aa36.98■■■■□ 3.51
KLHL42-202ENST00000539176 KIDINS220Q9ULH0 1771 aa36.97■■■■□ 3.51
KLHL42-202ENST00000539176 RAPGEF3O95398 923 aa36.96■■■■□ 3.51
KLHL42-202ENST00000539176 KDM5CP41229 1560 aa36.96■■■■□ 3.51
KLHL42-202ENST00000539176 PZPP20742 1482 aa36.94■■■■□ 3.5
KLHL42-202ENST00000539176 SIN3AQ96ST3 1273 aa36.92■■■■□ 3.5
KLHL42-202ENST00000539176 RICTORQ6R327 1708 aa36.91■■■■□ 3.5
KLHL42-202ENST00000539176 ACIN1Q9UKV3 1341 aaKnown RBP36.9■■■■□ 3.5
KLHL42-202ENST00000539176 TEX14Q8IWB6 1497 aa36.9■■■■□ 3.5
KLHL42-202ENST00000539176 DIEXFQ68CQ4 756 aaKnown RBP36.9■■■■□ 3.5
KLHL42-202ENST00000539176 FOXD1Q16676 465 aa36.89■■■■□ 3.5
KLHL42-202ENST00000539176 SLC4A1APQ9BWU0 796 aaKnown RBP36.89■■■■□ 3.5
KLHL42-202ENST00000539176 ERBINQ96RT1 1412 aa36.88■■■■□ 3.49
KLHL42-202ENST00000539176 NUP155O75694 1391 aa36.88■■■■□ 3.49
KLHL42-202ENST00000539176 HECW2Q9P2P5 1572 aa36.88■■■■□ 3.49
KLHL42-202ENST00000539176 NEUROD1Q13562 356 aa36.85■■■■□ 3.49
KLHL42-202ENST00000539176 FRMPD1Q5SYB0 1578 aa36.84■■■■□ 3.49
KLHL42-202ENST00000539176 MLH3Q9UHC1 1453 aa36.84■■■■□ 3.49
KLHL42-202ENST00000539176 UNC13BO14795 1591 aa36.83■■■■□ 3.49
KLHL42-202ENST00000539176 KDM5DQ9BY66 1539 aa36.82■■■■□ 3.49
KLHL42-202ENST00000539176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.81■■■■□ 3.484e-9■■□□□ 11.7
KLHL42-202ENST00000539176 ABCA6Q8N139 1617 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms