RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 NCKAP5LQ9HCH0 1330 aa15.1■□□□□ 0.01
TUBD1-206ENST00000539018 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
TUBD1-206ENST00000539018 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
TUBD1-206ENST00000539018 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
TUBD1-206ENST00000539018 TMC2Q8TDI7 906 aa15.03■□□□□ -0
TUBD1-206ENST00000539018 GPHNQ9NQX3 736 aaPredicted RBP15.02■□□□□ -0
TUBD1-206ENST00000539018 MFSD10Q14728 455 aa15.01□□□□□ -0.01
TUBD1-206ENST00000539018 DDX27Q96GQ7 796 aaKnown RBP15.01□□□□□ -0.01
TUBD1-206ENST00000539018 C2orf72A6NCS6 295 aa14.97□□□□□ -0.01
TUBD1-206ENST00000539018 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.97□□□□□ -0.01
TUBD1-206ENST00000539018 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
TUBD1-206ENST00000539018 TMEM92Q6UXU6 159 aa14.96□□□□□ -0.01
TUBD1-206ENST00000539018 KIF3CO14782 793 aa14.95□□□□□ -0.02
TUBD1-206ENST00000539018 PPP1R15BQ5SWA1 713 aa14.95□□□□□ -0.02
TUBD1-206ENST00000539018 P3H3Q8IVL6 736 aa14.95□□□□□ -0.02
TUBD1-206ENST00000539018 LHX8Q68G74 356 aa14.93□□□□□ -0.02
TUBD1-206ENST00000539018 POTEJP0CG39 1038 aa14.92□□□□□ -0.02
TUBD1-206ENST00000539018 FOXK1P85037 733 aa14.92□□□□□ -0.02
TUBD1-206ENST00000539018 DSG2Q14126 1118 aa14.92□□□□□ -0.02
TUBD1-206ENST00000539018 E2F4Q16254 413 aa14.92□□□□□ -0.02
TUBD1-206ENST00000539018 MAMSTRQ6ZN01 415 aa14.89□□□□□ -0.03
TUBD1-206ENST00000539018 KCNV2Q8TDN2 545 aa14.88□□□□□ -0.03
TUBD1-206ENST00000539018 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
TUBD1-206ENST00000539018 PLPP6Q8IY26 295 aa14.87□□□□□ -0.03
TUBD1-206ENST00000539018 CAMK2BQ13554 666 aa14.84□□□□□ -0.03
TUBD1-206ENST00000539018 BCANQ96GW7 911 aa14.84□□□□□ -0.03
TUBD1-206ENST00000539018 NBR1Q14596 966 aa14.8□□□□□ -0.04
TUBD1-206ENST00000539018 ARHGEF1Q92888 912 aaKnown RBP14.8□□□□□ -0.04
TUBD1-206ENST00000539018 SLAIN1Q8ND83 568 aa14.79□□□□□ -0.04
TUBD1-206ENST00000539018 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
TUBD1-206ENST00000539018 ARIH1Q9Y4X5 557 aaPredicted RBP14.74□□□□□ -0.05
TUBD1-206ENST00000539018 OTUD5Q96G74 571 aa14.72□□□□□ -0.05
TUBD1-206ENST00000539018 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
TUBD1-206ENST00000539018 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
TUBD1-206ENST00000539018 DPYSL4O14531 572 aa14.68□□□□□ -0.06
TUBD1-206ENST00000539018 SLC34A2O95436 690 aa14.66□□□□□ -0.06
TUBD1-206ENST00000539018 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
TUBD1-206ENST00000539018 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
TUBD1-206ENST00000539018 PTCD2Q8WV60 388 aaKnown RBP14.63□□□□□ -0.07
TUBD1-206ENST00000539018 TBC1D12O60347 775 aa14.62□□□□□ -0.07
TUBD1-206ENST00000539018 DOK7Q18PE1 504 aa14.62□□□□□ -0.07
TUBD1-206ENST00000539018 SPDYE16A6NNV3 312 aaPredicted RBP14.6□□□□□ -0.07
TUBD1-206ENST00000539018 PDIA6Q15084 440 aa14.6□□□□□ -0.07
TUBD1-206ENST00000539018 HOXB3P14651 431 aaPredicted RBP14.58□□□□□ -0.08
TUBD1-206ENST00000539018 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
TUBD1-206ENST00000539018 SEMA3EO15041 775 aa14.57□□□□□ -0.08
TUBD1-206ENST00000539018 SNPHO15079 494 aa14.57□□□□□ -0.08
TUBD1-206ENST00000539018 PCDHGA4Q9Y5G9 962 aa14.56□□□□□ -0.08
TUBD1-206ENST00000539018 ZNF316A6NFI3 1004 aaPredicted RBP14.54□□□□□ -0.08
TUBD1-206ENST00000539018 ZNF710Q8N1W2 664 aa14.54□□□□□ -0.08
TUBD1-206ENST00000539018 DCAF1Q9Y4B6 1507 aa14.54□□□□□ -0.08
TUBD1-206ENST00000539018 TESPA1A2RU30 521 aaPredicted RBP14.53□□□□□ -0.08
TUBD1-206ENST00000539018 EVI5O60447 810 aa14.52□□□□□ -0.09
TUBD1-206ENST00000539018 ZSWIM6Q9HCJ5 1215 aa14.52□□□□□ -0.09
TUBD1-206ENST00000539018 TULP1O00294 542 aaPredicted RBP14.51□□□□□ -0.09
TUBD1-206ENST00000539018 SMYD5Q6GMV2 418 aa14.48□□□□□ -0.09
TUBD1-206ENST00000539018 ARSIQ5FYB1 569 aa14.47□□□□□ -0.09
TUBD1-206ENST00000539018 MLLT3P42568 568 aaPredicted RBP14.46□□□□□ -0.09
TUBD1-206ENST00000539018 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
TUBD1-206ENST00000539018 ANO8Q9HCE9 1232 aaPredicted RBP14.44□□□□□ -0.1
TUBD1-206ENST00000539018 NUDT7P0C024 238 aa14.43□□□□□ -0.1
TUBD1-206ENST00000539018 PTGER2P43116 358 aa14.43□□□□□ -0.1
TUBD1-206ENST00000539018 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■■■■□ 24
TUBD1-206ENST00000539018 GRXCR2A6NFK2 248 aa14.41□□□□□ -0.1
TUBD1-206ENST00000539018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
TUBD1-206ENST00000539018 KDM4FA0A1W2PPD8 638 aa14.4□□□□□ -0.1
TUBD1-206ENST00000539018 DDX12PQ92771 950 aa14.4□□□□□ -0.1
TUBD1-206ENST00000539018 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
TUBD1-206ENST00000539018 HOXB1P14653 301 aaPredicted RBP14.38□□□□□ -0.11
TUBD1-206ENST00000539018 MYO15BQ96JP2 1530 aa14.36□□□□□ -0.11
TUBD1-206ENST00000539018 PHF14O94880 888 aa14.33□□□□□ -0.12
TUBD1-206ENST00000539018 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
TUBD1-206ENST00000539018 JPH4Q96JJ6 628 aa14.32□□□□□ -0.12
TUBD1-206ENST00000539018 OSBPP22059 807 aa14.31□□□□□ -0.12
TUBD1-206ENST00000539018 EPAS1Q99814 870 aa14.31□□□□□ -0.12
TUBD1-206ENST00000539018 LHX6Q9UPM6 363 aa14.31□□□□□ -0.12
TUBD1-206ENST00000539018 ST18O60284 1047 aa14.3□□□□□ -0.12
TUBD1-206ENST00000539018 RBM26Q5T8P6 1007 aaKnown RBP14.3□□□□□ -0.12
TUBD1-206ENST00000539018 PCDHGA10Q9Y5H3 936 aa14.3□□□□□ -0.12
TUBD1-206ENST00000539018 ZNF454Q8N9F8 522 aa14.29□□□□□ -0.12
TUBD1-206ENST00000539018 FOSBP53539 338 aa14.28□□□□□ -0.12
TUBD1-206ENST00000539018 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
TUBD1-206ENST00000539018 TYW1BQ6NUM6 668 aa14.27□□□□□ -0.13
TUBD1-206ENST00000539018 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
TUBD1-206ENST00000539018 FBXW7Q969H0 707 aa14.25□□□□□ -0.13
TUBD1-206ENST00000539018 GPIHBP1Q8IV16 184 aa14.24□□□□□ -0.13
TUBD1-206ENST00000539018 EN1Q05925 392 aaPredicted RBP14.23□□□□□ -0.13
TUBD1-206ENST00000539018 ZDHHC16Q969W1 377 aa14.23□□□□□ -0.13
TUBD1-206ENST00000539018 PRIM1P49642 420 aaKnown RBP14.22□□□□□ -0.13
TUBD1-206ENST00000539018 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
TUBD1-206ENST00000539018 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
TUBD1-206ENST00000539018 NACADO15069 1562 aa14.22□□□□□ -0.13
TUBD1-206ENST00000539018 MAP3K7O43318 606 aa14.21□□□□□ -0.13
TUBD1-206ENST00000539018 NUTM2FA1L443 756 aa14.2□□□□□ -0.14
TUBD1-206ENST00000539018 EMP3P54852 163 aa14.2□□□□□ -0.14
TUBD1-206ENST00000539018 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
TUBD1-206ENST00000539018 MARVELD3Q96A59 401 aa14.19□□□□□ -0.14
TUBD1-206ENST00000539018 ERBB3P21860 1342 aa14.18□□□□□ -0.14
TUBD1-206ENST00000539018 ZC3H15Q8WU90 426 aaKnown RBP14.18□□□□□ -0.14
TUBD1-206ENST00000539018 ABCC9O60706 1549 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms