RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 ERBB3P21860 1342 aa13.84□□□□□ -0.19
PTPRO-207ENST00000538907 NLRP6P59044 892 aa13.83□□□□□ -0.2
PTPRO-207ENST00000538907 MFRPQ9BY79 579 aa13.83□□□□□ -0.2
PTPRO-207ENST00000538907 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
PTPRO-207ENST00000538907 PKD2Q13563 968 aa13.81□□□□□ -0.2
PTPRO-207ENST00000538907 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
PTPRO-207ENST00000538907 RIMBP2O15034 1052 aa13.79□□□□□ -0.2
PTPRO-207ENST00000538907 STK25O00506 426 aa13.78□□□□□ -0.2
PTPRO-207ENST00000538907 RGL2O15211 777 aa13.78□□□□□ -0.2
PTPRO-207ENST00000538907 VARS2Q5ST30 1063 aaKnown RBP13.78□□□□□ -0.2
PTPRO-207ENST00000538907 ZSWIM6Q9HCJ5 1215 aa13.76□□□□□ -0.21
PTPRO-207ENST00000538907 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
PTPRO-207ENST00000538907 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
PTPRO-207ENST00000538907 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
PTPRO-207ENST00000538907 KIF3CO14782 793 aa13.7□□□□□ -0.22
PTPRO-207ENST00000538907 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
PTPRO-207ENST00000538907 C2orf72A6NCS6 295 aa13.67□□□□□ -0.22
PTPRO-207ENST00000538907 PPP1R37O75864 691 aa13.63□□□□□ -0.23
PTPRO-207ENST00000538907 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
PTPRO-207ENST00000538907 NUDT7P0C024 238 aa13.55□□□□□ -0.24
PTPRO-207ENST00000538907 RNF166Q96A37 237 aaPredicted RBP13.55□□□□□ -0.24
PTPRO-207ENST00000538907 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
PTPRO-207ENST00000538907 PCDHGA4Q9Y5G9 962 aa13.51□□□□□ -0.25
PTPRO-207ENST00000538907 SLC34A2O95436 690 aa13.5□□□□□ -0.25
PTPRO-207ENST00000538907 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
PTPRO-207ENST00000538907 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
PTPRO-207ENST00000538907 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
PTPRO-207ENST00000538907 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
PTPRO-207ENST00000538907 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPRO-207ENST00000538907 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
PTPRO-207ENST00000538907 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
PTPRO-207ENST00000538907 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
PTPRO-207ENST00000538907 PTGER2P43116 358 aa13.37□□□□□ -0.27
PTPRO-207ENST00000538907 PBX2P40425 430 aa13.35□□□□□ -0.27
PTPRO-207ENST00000538907 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
PTPRO-207ENST00000538907 CHGAP10645 457 aaKnown RBP13.34□□□□□ -0.27
PTPRO-207ENST00000538907 FOXK1P85037 733 aa13.34□□□□□ -0.27
PTPRO-207ENST00000538907 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
PTPRO-207ENST00000538907 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
PTPRO-207ENST00000538907 DSG2Q14126 1118 aa13.33□□□□□ -0.28
PTPRO-207ENST00000538907 GPHNQ9NQX3 736 aaPredicted RBP13.33□□□□□ -0.28
PTPRO-207ENST00000538907 ARHGAP33O14559 1287 aa13.26□□□□□ -0.29
PTPRO-207ENST00000538907 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
PTPRO-207ENST00000538907 PSEN2P49810 448 aa13.24□□□□□ -0.29
PTPRO-207ENST00000538907 DMRTA1Q5VZB9 504 aa13.24□□□□□ -0.29
PTPRO-207ENST00000538907 ADGRD1Q6QNK2 874 aa13.23□□□□□ -0.29
PTPRO-207ENST00000538907 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
PTPRO-207ENST00000538907 CRISPLD2Q9H0B8 497 aa13.18□□□□□ -0.3
PTPRO-207ENST00000538907 HRO43593 1189 aa13.17□□□□□ -0.3
PTPRO-207ENST00000538907 OXER1Q8TDS5 423 aa13.17□□□□□ -0.3
PTPRO-207ENST00000538907 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPRO-207ENST00000538907 TBC1D12O60347 775 aa13.15□□□□□ -0.3
PTPRO-207ENST00000538907 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
PTPRO-207ENST00000538907 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
PTPRO-207ENST00000538907 TK2O00142 265 aa13.13□□□□□ -0.31
PTPRO-207ENST00000538907 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
PTPRO-207ENST00000538907 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
PTPRO-207ENST00000538907 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
PTPRO-207ENST00000538907 HCSTQ9UBK5 93 aa13.08□□□□□ -0.32
PTPRO-207ENST00000538907 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
PTPRO-207ENST00000538907 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
PTPRO-207ENST00000538907 PLA2G2EQ9NZK7 142 aa13.04□□□□□ -0.32
PTPRO-207ENST00000538907 PDE4AP27815 886 aa13.03□□□□□ -0.32
PTPRO-207ENST00000538907 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
PTPRO-207ENST00000538907 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.33
PTPRO-207ENST00000538907 FOSBP53539 338 aa13.01□□□□□ -0.33
PTPRO-207ENST00000538907 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
PTPRO-207ENST00000538907 ANO8Q9HCE9 1232 aaPredicted RBP13□□□□□ -0.33
PTPRO-207ENST00000538907 LARP6Q9BRS8 491 aaKnown RBP12.99□□□□□ -0.33
PTPRO-207ENST00000538907 EVI5O60447 810 aa12.96□□□□□ -0.33
PTPRO-207ENST00000538907 MFSD10Q14728 455 aa12.95□□□□□ -0.34
PTPRO-207ENST00000538907 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
PTPRO-207ENST00000538907 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
PTPRO-207ENST00000538907 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
PTPRO-207ENST00000538907 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
PTPRO-207ENST00000538907 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
PTPRO-207ENST00000538907 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
PTPRO-207ENST00000538907 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
PTPRO-207ENST00000538907 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
PTPRO-207ENST00000538907 JPH4Q96JJ6 628 aa12.92□□□□□ -0.34
PTPRO-207ENST00000538907 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
PTPRO-207ENST00000538907 PTPREP23469 700 aa12.9□□□□□ -0.34
PTPRO-207ENST00000538907 PTPN5P54829 565 aa12.88□□□□□ -0.35
PTPRO-207ENST00000538907 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
PTPRO-207ENST00000538907 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
PTPRO-207ENST00000538907 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
PTPRO-207ENST00000538907 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
PTPRO-207ENST00000538907 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
PTPRO-207ENST00000538907 COL9A1P20849 921 aa12.79□□□□□ -0.36
PTPRO-207ENST00000538907 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
PTPRO-207ENST00000538907 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
PTPRO-207ENST00000538907 WNT2BQ93097 391 aa12.78□□□□□ -0.36
PTPRO-207ENST00000538907 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
PTPRO-207ENST00000538907 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
PTPRO-207ENST00000538907 CAMK2BQ13554 666 aa12.74□□□□□ -0.37
PTPRO-207ENST00000538907 PHF14O94880 888 aa12.72□□□□□ -0.37
PTPRO-207ENST00000538907 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
PTPRO-207ENST00000538907 NBPF3Q9H094 633 aa12.71□□□□□ -0.37
PTPRO-207ENST00000538907 DPYSL4O14531 572 aa12.7□□□□□ -0.38
PTPRO-207ENST00000538907 RABGEF1Q9UJ41 708 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms