RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MAGI3Q5TCQ9 1506 aa21.11■□□□□ 0.97
CDCA3-207ENST00000538862 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
CDCA3-207ENST00000538862 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
CDCA3-207ENST00000538862 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CDCA3-207ENST00000538862 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
CDCA3-207ENST00000538862 ITGAEP38570 1179 aa21.1■□□□□ 0.97
CDCA3-207ENST00000538862 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
CDCA3-207ENST00000538862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDCA3-207ENST00000538862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDCA3-207ENST00000538862 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
CDCA3-207ENST00000538862 KIF14Q15058 1648 aa21.01■□□□□ 0.95
CDCA3-207ENST00000538862 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
CDCA3-207ENST00000538862 CCDC18Q5T9S5 1454 aa20.98■□□□□ 0.95
CDCA3-207ENST00000538862 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
CDCA3-207ENST00000538862 TROQ12816 1431 aaPredicted RBP20.97■□□□□ 0.95
CDCA3-207ENST00000538862 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
CDCA3-207ENST00000538862 ARAP3Q8WWN8 1544 aa20.93■□□□□ 0.94
CDCA3-207ENST00000538862 NEO1Q92859 1461 aa20.93■□□□□ 0.94
CDCA3-207ENST00000538862 FANCAO15360 1455 aa20.92■□□□□ 0.94
CDCA3-207ENST00000538862 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
CDCA3-207ENST00000538862 MYO5CQ9NQX4 1742 aa20.91■□□□□ 0.94
CDCA3-207ENST00000538862 PLCH2O75038 1416 aa20.88■□□□□ 0.93
CDCA3-207ENST00000538862 AKNAQ7Z591 1439 aa20.88■□□□□ 0.93
CDCA3-207ENST00000538862 FGD6Q6ZV73 1430 aa20.88■□□□□ 0.93
CDCA3-207ENST00000538862 CFAP74Q9C0B2 1584 aa20.87■□□□□ 0.93
CDCA3-207ENST00000538862 FRMPD1Q5SYB0 1578 aa20.86■□□□□ 0.93
CDCA3-207ENST00000538862 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
CDCA3-207ENST00000538862 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
CDCA3-207ENST00000538862 CDC42BPBQ9Y5S2 1711 aa20.83■□□□□ 0.92
CDCA3-207ENST00000538862 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
CDCA3-207ENST00000538862 RICTORQ6R327 1708 aa20.82■□□□□ 0.92
CDCA3-207ENST00000538862 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
CDCA3-207ENST00000538862 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
CDCA3-207ENST00000538862 SIN3AQ96ST3 1273 aa20.8■□□□□ 0.92
CDCA3-207ENST00000538862 KDM4FA0A1W2PPD8 638 aa20.8■□□□□ 0.92
CDCA3-207ENST00000538862 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
CDCA3-207ENST00000538862 CDC42BPAQ5VT25 1732 aa20.8■□□□□ 0.92
CDCA3-207ENST00000538862 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
CDCA3-207ENST00000538862 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
CDCA3-207ENST00000538862 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
CDCA3-207ENST00000538862 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
CDCA3-207ENST00000538862 NCOA2Q15596 1464 aa20.77■□□□□ 0.91
CDCA3-207ENST00000538862 HFM1A2PYH4 1435 aa20.77■□□□□ 0.91
CDCA3-207ENST00000538862 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
CDCA3-207ENST00000538862 PPP1R15AO75807 674 aaPredicted RBP20.74■□□□□ 0.91
CDCA3-207ENST00000538862 POGZQ7Z3K3 1410 aa20.73■□□□□ 0.91
CDCA3-207ENST00000538862 GPATCH8Q9UKJ3 1502 aaKnown RBP20.72■□□□□ 0.91
CDCA3-207ENST00000538862 PTPN23Q9H3S7 1636 aa20.72■□□□□ 0.91
CDCA3-207ENST00000538862 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
CDCA3-207ENST00000538862 ZNF777Q9ULD5 760 aaPredicted RBP20.71■□□□□ 0.91
CDCA3-207ENST00000538862 ZMYM4Q5VZL5 1548 aa20.69■□□□□ 0.9
CDCA3-207ENST00000538862 ARHGEF40Q8TER5 1519 aa20.69■□□□□ 0.9
CDCA3-207ENST00000538862 YEATS2Q9ULM3 1422 aa20.69■□□□□ 0.9
CDCA3-207ENST00000538862 ARHGEF12Q9NZN5 1544 aa20.68■□□□□ 0.9
CDCA3-207ENST00000538862 AFAP1Q8N556 730 aa20.68■□□□□ 0.9
CDCA3-207ENST00000538862 ABCC1P33527 1531 aa20.68■□□□□ 0.9
CDCA3-207ENST00000538862 NAIPQ13075 1403 aa20.67■□□□□ 0.9
CDCA3-207ENST00000538862 SAMD9LQ8IVG5 1584 aa20.67■□□□□ 0.9
CDCA3-207ENST00000538862 ZFYVE16Q7Z3T8 1539 aa20.67■□□□□ 0.9
CDCA3-207ENST00000538862 ITSN2Q9NZM3 1697 aa20.66■□□□□ 0.9
CDCA3-207ENST00000538862 CFDP1Q9UEE9 299 aaPredicted RBP20.65■□□□□ 0.9
CDCA3-207ENST00000538862 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
CDCA3-207ENST00000538862 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
CDCA3-207ENST00000538862 TCOF1Q13428 1488 aaKnown RBP20.64■□□□□ 0.89
CDCA3-207ENST00000538862 ARID4BQ4LE39 1312 aaPredicted RBP20.63■□□□□ 0.89
CDCA3-207ENST00000538862 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
CDCA3-207ENST00000538862 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
CDCA3-207ENST00000538862 SYCP2Q9BX26 1530 aa20.62■□□□□ 0.89
CDCA3-207ENST00000538862 KDM5CP41229 1560 aa20.62■□□□□ 0.89
CDCA3-207ENST00000538862 MYT1LQ9UL68 1186 aa20.62■□□□□ 0.89
CDCA3-207ENST00000538862 MAGI2Q86UL8 1455 aa20.62■□□□□ 0.89
CDCA3-207ENST00000538862 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
CDCA3-207ENST00000538862 HNRNPMP52272 730 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDCA3-207ENST00000538862 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
CDCA3-207ENST00000538862 HECW2Q9P2P5 1572 aa20.58■□□□□ 0.89
CDCA3-207ENST00000538862 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
CDCA3-207ENST00000538862 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
CDCA3-207ENST00000538862 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
CDCA3-207ENST00000538862 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
CDCA3-207ENST00000538862 ABCA6Q8N139 1617 aa20.54■□□□□ 0.88
CDCA3-207ENST00000538862 ATP10AO60312 1499 aa20.54■□□□□ 0.88
CDCA3-207ENST00000538862 DIP2CQ9Y2E4 1556 aa20.54■□□□□ 0.88
CDCA3-207ENST00000538862 ADAMTSL3P82987 1691 aa20.54■□□□□ 0.88
CDCA3-207ENST00000538862 KIDINS220Q9ULH0 1771 aa20.53■□□□□ 0.88
CDCA3-207ENST00000538862 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
CDCA3-207ENST00000538862 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
CDCA3-207ENST00000538862 PLEKHH2Q8IVE3 1493 aa20.53■□□□□ 0.88
CDCA3-207ENST00000538862 C9orf84Q5VXU9 1444 aa20.52■□□□□ 0.88
CDCA3-207ENST00000538862 KIAA1107Q9UPP5 1409 aa20.52■□□□□ 0.88
CDCA3-207ENST00000538862 MLECQ14165 292 aa20.52■□□□□ 0.88
CDCA3-207ENST00000538862 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
CDCA3-207ENST00000538862 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
CDCA3-207ENST00000538862 SPAG9O60271 1321 aaKnown RBP20.49■□□□□ 0.87
CDCA3-207ENST00000538862 MBD5Q9P267 1494 aa20.48■□□□□ 0.87
CDCA3-207ENST00000538862 ANP32CO43423 234 aa20.47■□□□□ 0.87
CDCA3-207ENST00000538862 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
CDCA3-207ENST00000538862 RRP7BPQ9NSQ0 103 aa20.46■□□□□ 0.87
CDCA3-207ENST00000538862 ATP7AQ04656 1500 aa20.46■□□□□ 0.87
CDCA3-207ENST00000538862 HIRIP3Q9BW71 556 aaPredicted RBP20.45■□□□□ 0.86
CDCA3-207ENST00000538862 INO80Q9ULG1 1556 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms