RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 CFAP74Q9C0B2 1584 aa17.51■□□□□ 0.39
MRPS35-203ENST00000538315 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
MRPS35-203ENST00000538315 ARAP3Q8WWN8 1544 aa17.5■□□□□ 0.39
MRPS35-203ENST00000538315 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
MRPS35-203ENST00000538315 NEO1Q92859 1461 aa17.48■□□□□ 0.39
MRPS35-203ENST00000538315 CFDP1Q9UEE9 299 aaPredicted RBP17.48■□□□□ 0.39
MRPS35-203ENST00000538315 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
MRPS35-203ENST00000538315 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
MRPS35-203ENST00000538315 KDM6BO15054 1643 aa17.45■□□□□ 0.38
MRPS35-203ENST00000538315 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
MRPS35-203ENST00000538315 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
MRPS35-203ENST00000538315 ADGRL1O94910 1474 aa17.44■□□□□ 0.38
MRPS35-203ENST00000538315 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
MRPS35-203ENST00000538315 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
MRPS35-203ENST00000538315 COL17A1Q9UMD9 1497 aaPredicted RBP17.39■□□□□ 0.37
MRPS35-203ENST00000538315 ABCC1P33527 1531 aa17.39■□□□□ 0.37
MRPS35-203ENST00000538315 MIA2Q96PC5 1412 aa17.39■□□□□ 0.37
MRPS35-203ENST00000538315 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
MRPS35-203ENST00000538315 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
MRPS35-203ENST00000538315 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
MRPS35-203ENST00000538315 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
MRPS35-203ENST00000538315 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
MRPS35-203ENST00000538315 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
MRPS35-203ENST00000538315 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
MRPS35-203ENST00000538315 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
MRPS35-203ENST00000538315 RICTORQ6R327 1708 aa17.36■□□□□ 0.37
MRPS35-203ENST00000538315 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
MRPS35-203ENST00000538315 ARHGEF12Q9NZN5 1544 aa17.35■□□□□ 0.37
MRPS35-203ENST00000538315 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.37
MRPS35-203ENST00000538315 FRMPD1Q5SYB0 1578 aa17.33■□□□□ 0.36
MRPS35-203ENST00000538315 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.36
MRPS35-203ENST00000538315 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.36
MRPS35-203ENST00000538315 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
MRPS35-203ENST00000538315 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
MRPS35-203ENST00000538315 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
MRPS35-203ENST00000538315 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
MRPS35-203ENST00000538315 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
MRPS35-203ENST00000538315 TCOF1Q13428 1488 aaKnown RBP17.3■□□□□ 0.36
MRPS35-203ENST00000538315 MBD5Q9P267 1494 aa17.29■□□□□ 0.36
MRPS35-203ENST00000538315 KDM5CP41229 1560 aa17.27■□□□□ 0.36
MRPS35-203ENST00000538315 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
MRPS35-203ENST00000538315 ARHGEF5Q12774 1597 aa17.27■□□□□ 0.35
MRPS35-203ENST00000538315 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.35
MRPS35-203ENST00000538315 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
MRPS35-203ENST00000538315 HECW2Q9P2P5 1572 aa17.25■□□□□ 0.35
MRPS35-203ENST00000538315 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
MRPS35-203ENST00000538315 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
MRPS35-203ENST00000538315 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
MRPS35-203ENST00000538315 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
MRPS35-203ENST00000538315 DNMT1P26358 1616 aaKnown RBP17.24■□□□□ 0.35
MRPS35-203ENST00000538315 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
MRPS35-203ENST00000538315 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
MRPS35-203ENST00000538315 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
MRPS35-203ENST00000538315 DAPK1P53355 1430 aa17.21■□□□□ 0.35
MRPS35-203ENST00000538315 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
MRPS35-203ENST00000538315 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
MRPS35-203ENST00000538315 ATP7AQ04656 1500 aa17.21■□□□□ 0.35
MRPS35-203ENST00000538315 YEATS2Q9ULM3 1422 aa17.21■□□□□ 0.35
MRPS35-203ENST00000538315 ARHGEF40Q8TER5 1519 aa17.2■□□□□ 0.34
MRPS35-203ENST00000538315 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
MRPS35-203ENST00000538315 ABCC5O15440 1437 aa17.2■□□□□ 0.34
MRPS35-203ENST00000538315 ITGAEP38570 1179 aa17.2■□□□□ 0.34
MRPS35-203ENST00000538315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
MRPS35-203ENST00000538315 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
MRPS35-203ENST00000538315 ABCA6Q8N139 1617 aa17.18■□□□□ 0.34
MRPS35-203ENST00000538315 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
MRPS35-203ENST00000538315 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
MRPS35-203ENST00000538315 SHANK2Q9UPX8 1470 aa17.17■□□□□ 0.34
MRPS35-203ENST00000538315 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
MRPS35-203ENST00000538315 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
MRPS35-203ENST00000538315 ATP10AO60312 1499 aa17.14■□□□□ 0.33
MRPS35-203ENST00000538315 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
MRPS35-203ENST00000538315 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
MRPS35-203ENST00000538315 PLXNC1O60486 1568 aa17.11■□□□□ 0.33
MRPS35-203ENST00000538315 ANKRD30AQ9BXX3 1397 aa17.11■□□□□ 0.33
MRPS35-203ENST00000538315 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
MRPS35-203ENST00000538315 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
MRPS35-203ENST00000538315 A2MP01023 1474 aa17.09■□□□□ 0.33
MRPS35-203ENST00000538315 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.33
MRPS35-203ENST00000538315 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
MRPS35-203ENST00000538315 ADGRL2O95490 1459 aa17.08■□□□□ 0.32
MRPS35-203ENST00000538315 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
MRPS35-203ENST00000538315 NCOA1Q15788 1441 aa17.07■□□□□ 0.32
MRPS35-203ENST00000538315 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
MRPS35-203ENST00000538315 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
MRPS35-203ENST00000538315 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
MRPS35-203ENST00000538315 MLECQ14165 292 aa17.03■□□□□ 0.32
MRPS35-203ENST00000538315 AGLP35573 1532 aa17.02■□□□□ 0.31
MRPS35-203ENST00000538315 KIF3BO15066 747 aa17.01■□□□□ 0.31
MRPS35-203ENST00000538315 ERBINQ96RT1 1412 aa17■□□□□ 0.31
MRPS35-203ENST00000538315 BCORL1Q5H9F3 1711 aa17■□□□□ 0.31
MRPS35-203ENST00000538315 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
MRPS35-203ENST00000538315 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
MRPS35-203ENST00000538315 GGT6Q6P531 493 aa16.99■□□□□ 0.31
MRPS35-203ENST00000538315 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
MRPS35-203ENST00000538315 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
MRPS35-203ENST00000538315 HFM1A2PYH4 1435 aa16.96■□□□□ 0.3
MRPS35-203ENST00000538315 NAIPQ13075 1403 aa16.96■□□□□ 0.3
MRPS35-203ENST00000538315 FER1L4A9Z1Z3 1794 aa16.95■□□□□ 0.3
MRPS35-203ENST00000538315 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms