RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
AC087235.1-201ENST00000538297 MAP3K1Q13233 1512 aa17.36■□□□□ 0.37
AC087235.1-201ENST00000538297 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
AC087235.1-201ENST00000538297 GLI2P10070 1586 aa17.33■□□□□ 0.37
AC087235.1-201ENST00000538297 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
AC087235.1-201ENST00000538297 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
AC087235.1-201ENST00000538297 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
AC087235.1-201ENST00000538297 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
AC087235.1-201ENST00000538297 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
AC087235.1-201ENST00000538297 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
AC087235.1-201ENST00000538297 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
AC087235.1-201ENST00000538297 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
AC087235.1-201ENST00000538297 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
AC087235.1-201ENST00000538297 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
AC087235.1-201ENST00000538297 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
AC087235.1-201ENST00000538297 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
AC087235.1-201ENST00000538297 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
AC087235.1-201ENST00000538297 ABCA9Q8IUA7 1624 aa17.23■□□□□ 0.35
AC087235.1-201ENST00000538297 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
AC087235.1-201ENST00000538297 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
AC087235.1-201ENST00000538297 CD109Q6YHK3 1445 aa17.22■□□□□ 0.35
AC087235.1-201ENST00000538297 KIF14Q15058 1648 aa17.21■□□□□ 0.35
AC087235.1-201ENST00000538297 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
AC087235.1-201ENST00000538297 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.35
AC087235.1-201ENST00000538297 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
AC087235.1-201ENST00000538297 MAP3K4Q9Y6R4 1608 aa17.2■□□□□ 0.34
AC087235.1-201ENST00000538297 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
AC087235.1-201ENST00000538297 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
AC087235.1-201ENST00000538297 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
AC087235.1-201ENST00000538297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC087235.1-201ENST00000538297 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
AC087235.1-201ENST00000538297 PLCH2O75038 1416 aa17.16■□□□□ 0.34
AC087235.1-201ENST00000538297 EFCAB2Q5VUJ9 269 aa17.14■□□□□ 0.33
AC087235.1-201ENST00000538297 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
AC087235.1-201ENST00000538297 KANK4Q5T7N3 995 aaPredicted RBP17.13■□□□□ 0.33
AC087235.1-201ENST00000538297 PIP4P2Q8N4L2 257 aa17.13■□□□□ 0.33
AC087235.1-201ENST00000538297 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
AC087235.1-201ENST00000538297 NEO1Q92859 1461 aa17.12■□□□□ 0.33
AC087235.1-201ENST00000538297 TTC37Q6PGP7 1564 aa17.1■□□□□ 0.33
AC087235.1-201ENST00000538297 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
AC087235.1-201ENST00000538297 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
AC087235.1-201ENST00000538297 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
AC087235.1-201ENST00000538297 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
AC087235.1-201ENST00000538297 FANCAO15360 1455 aa17.08■□□□□ 0.32
AC087235.1-201ENST00000538297 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
AC087235.1-201ENST00000538297 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
AC087235.1-201ENST00000538297 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
AC087235.1-201ENST00000538297 ITSN2Q9NZM3 1697 aa17.05■□□□□ 0.32
AC087235.1-201ENST00000538297 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
AC087235.1-201ENST00000538297 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
AC087235.1-201ENST00000538297 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
AC087235.1-201ENST00000538297 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
AC087235.1-201ENST00000538297 PLEKHH2Q8IVE3 1493 aa17.04■□□□□ 0.32
AC087235.1-201ENST00000538297 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
AC087235.1-201ENST00000538297 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
AC087235.1-201ENST00000538297 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.32
AC087235.1-201ENST00000538297 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
AC087235.1-201ENST00000538297 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
AC087235.1-201ENST00000538297 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
AC087235.1-201ENST00000538297 HAX1O00165 279 aa16.99■□□□□ 0.31
AC087235.1-201ENST00000538297 ADGRL1O94910 1474 aa16.98■□□□□ 0.31
AC087235.1-201ENST00000538297 DENND4BO75064 1496 aaPredicted RBP16.97■□□□□ 0.31
AC087235.1-201ENST00000538297 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
AC087235.1-201ENST00000538297 KDM6BO15054 1643 aa16.96■□□□□ 0.31
AC087235.1-201ENST00000538297 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
AC087235.1-201ENST00000538297 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
AC087235.1-201ENST00000538297 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
AC087235.1-201ENST00000538297 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
AC087235.1-201ENST00000538297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
AC087235.1-201ENST00000538297 ABCC1P33527 1531 aa16.92■□□□□ 0.3
AC087235.1-201ENST00000538297 MAGI2Q86UL8 1455 aa16.92■□□□□ 0.3
AC087235.1-201ENST00000538297 SAMD9LQ8IVG5 1584 aa16.91■□□□□ 0.3
AC087235.1-201ENST00000538297 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
AC087235.1-201ENST00000538297 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
AC087235.1-201ENST00000538297 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
AC087235.1-201ENST00000538297 RAPGEF3O95398 923 aa16.89■□□□□ 0.29
AC087235.1-201ENST00000538297 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
AC087235.1-201ENST00000538297 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
AC087235.1-201ENST00000538297 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
AC087235.1-201ENST00000538297 MBD5Q9P267 1494 aa16.88■□□□□ 0.29
AC087235.1-201ENST00000538297 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
AC087235.1-201ENST00000538297 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
AC087235.1-201ENST00000538297 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
AC087235.1-201ENST00000538297 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
AC087235.1-201ENST00000538297 RICTORQ6R327 1708 aa16.86■□□□□ 0.29
AC087235.1-201ENST00000538297 ZMYM4Q5VZL5 1548 aa16.86■□□□□ 0.29
AC087235.1-201ENST00000538297 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
AC087235.1-201ENST00000538297 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
AC087235.1-201ENST00000538297 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
AC087235.1-201ENST00000538297 ARHGEF12Q9NZN5 1544 aa16.85■□□□□ 0.29
AC087235.1-201ENST00000538297 RTEL1-TNFRSF6BF6WH68 1400 aa16.85■□□□□ 0.29
AC087235.1-201ENST00000538297 KDM5CP41229 1560 aa16.85■□□□□ 0.29
AC087235.1-201ENST00000538297 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
AC087235.1-201ENST00000538297 SYCP2Q9BX26 1530 aa16.85■□□□□ 0.29
AC087235.1-201ENST00000538297 CCDC141Q6ZP82 1450 aa16.84■□□□□ 0.29
AC087235.1-201ENST00000538297 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
AC087235.1-201ENST00000538297 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.29
AC087235.1-201ENST00000538297 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
AC087235.1-201ENST00000538297 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
AC087235.1-201ENST00000538297 ZBTB22O15209 634 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms