RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 G3V3G9 751 aa7.96□□□□□ -1.14
SNHG1-208ENST00000538266 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-208ENST00000538266 VSIG10Q8N0Z9 540 aa7.94□□□□□ -1.14
SNHG1-208ENST00000538266 BOLA1Q9Y3E2 137 aa7.94□□□□□ -1.14
SNHG1-208ENST00000538266 CADPS2Q86UW7 1296 aa7.92□□□□□ -1.14
SNHG1-208ENST00000538266 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
SNHG1-208ENST00000538266 KDM2AQ9Y2K7 1162 aa7.91□□□□□ -1.14
SNHG1-208ENST00000538266 TMEM121BQ9BXQ6 578 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-208ENST00000538266 PDE4AP27815 886 aa7.88□□□□□ -1.15
SNHG1-208ENST00000538266 POTEB2H3BUK9 544 aa7.87□□□□□ -1.15
SNHG1-208ENST00000538266 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
SNHG1-208ENST00000538266 EIF4G1Q04637 1599 aaKnown RBP7.85□□□□□ -1.15
SNHG1-208ENST00000538266 C3orf67Q6ZVT6 689 aa7.85□□□□□ -1.15
SNHG1-208ENST00000538266 LARP6Q9BRS8 491 aaKnown RBP7.85□□□□□ -1.15
SNHG1-208ENST00000538266 NCKAP5LQ9HCH0 1330 aa7.84□□□□□ -1.15
SNHG1-208ENST00000538266 POTEJP0CG39 1038 aa7.83□□□□□ -1.16
SNHG1-208ENST00000538266 TMC2Q8TDI7 906 aa7.83□□□□□ -1.16
SNHG1-208ENST00000538266 GPHNQ9NQX3 736 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-208ENST00000538266 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.83□□□□□ -1.16
SNHG1-208ENST00000538266 CRISPLD2Q9H0B8 497 aa7.82□□□□□ -1.16
SNHG1-208ENST00000538266 BAZ1AQ9NRL2 1556 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-208ENST00000538266 CECR2Q9BXF3 1484 aa7.81□□□□□ -1.16
SNHG1-208ENST00000538266 C2orf72A6NCS6 295 aa7.8□□□□□ -1.16
SNHG1-208ENST00000538266 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
SNHG1-208ENST00000538266 MAMSTRQ6ZN01 415 aa7.8□□□□□ -1.16
SNHG1-208ENST00000538266 SMARCA4P51532 1647 aa7.8□□□□□ -1.16
SNHG1-208ENST00000538266 CC2D2AQ9P2K1 1620 aa7.79□□□□□ -1.16
SNHG1-208ENST00000538266 DDX27Q96GQ7 796 aaKnown RBP7.79□□□□□ -1.16
SNHG1-208ENST00000538266 SCUBE2Q9NQ36 999 aa7.79□□□□□ -1.16
SNHG1-208ENST00000538266 KIF3CO14782 793 aa7.77□□□□□ -1.17
SNHG1-208ENST00000538266 DSG2Q14126 1118 aa7.77□□□□□ -1.17
SNHG1-208ENST00000538266 MFSD10Q14728 455 aa7.77□□□□□ -1.17
SNHG1-208ENST00000538266 LHX8Q68G74 356 aa7.77□□□□□ -1.17
SNHG1-208ENST00000538266 FOXK1P85037 733 aa7.76□□□□□ -1.17
SNHG1-208ENST00000538266 PPP1R15BQ5SWA1 713 aa7.76□□□□□ -1.17
SNHG1-208ENST00000538266 MROH2BQ7Z745 1585 aa7.76□□□□□ -1.17
SNHG1-208ENST00000538266 E2F4Q16254 413 aa7.75□□□□□ -1.17
SNHG1-208ENST00000538266 PLPP6Q8IY26 295 aa7.75□□□□□ -1.17
SNHG1-208ENST00000538266 SLAIN1Q8ND83 568 aa7.75□□□□□ -1.17
SNHG1-208ENST00000538266 SMARCA2P51531 1590 aa7.75□□□□□ -1.17
SNHG1-208ENST00000538266 OTUD5Q96G74 571 aa7.72□□□□□ -1.17
SNHG1-208ENST00000538266 ATAD2BQ9ULI0 1458 aa7.71□□□□□ -1.18
SNHG1-208ENST00000538266 PEG3Q9GZU2 1588 aa7.71□□□□□ -1.18
SNHG1-208ENST00000538266 RSF1Q96T23 1441 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-208ENST00000538266 P3H3Q8IVL6 736 aa7.7□□□□□ -1.18
SNHG1-208ENST00000538266 BAZ1BQ9UIG0 1483 aaKnown RBP7.69□□□□□ -1.18
SNHG1-208ENST00000538266 HMGXB3Q12766 1538 aa7.69□□□□□ -1.18
SNHG1-208ENST00000538266 CAMK2BQ13554 666 aa7.69□□□□□ -1.18
SNHG1-208ENST00000538266 KCNV2Q8TDN2 545 aa7.69□□□□□ -1.18
SNHG1-208ENST00000538266 NCAPD3P42695 1498 aa7.68□□□□□ -1.18
SNHG1-208ENST00000538266 WIZO95785 1651 aa7.68□□□□□ -1.18
SNHG1-208ENST00000538266 ARHGEF1Q92888 912 aaKnown RBP7.67□□□□□ -1.18
SNHG1-208ENST00000538266 EMILIN3Q9NT22 766 aa7.67□□□□□ -1.18
SNHG1-208ENST00000538266 MAP3K9P80192 1104 aa7.65□□□□□ -1.18
SNHG1-208ENST00000538266 UPF1Q92900 1129 aaKnown RBP eCLIP7.65□□□□□ -1.18
SNHG1-208ENST00000538266 TBC1D12O60347 775 aa7.64□□□□□ -1.19
SNHG1-208ENST00000538266 SLC34A2O95436 690 aa7.64□□□□□ -1.19
SNHG1-208ENST00000538266 DPYSL4O14531 572 aa7.63□□□□□ -1.19
SNHG1-208ENST00000538266 SNPHO15079 494 aa7.63□□□□□ -1.19
SNHG1-208ENST00000538266 DOK7Q18PE1 504 aa7.63□□□□□ -1.19
SNHG1-208ENST00000538266 OXER1Q8TDS5 423 aa7.63□□□□□ -1.19
SNHG1-208ENST00000538266 BCANQ96GW7 911 aa7.63□□□□□ -1.19
SNHG1-208ENST00000538266 ARIH1Q9Y4X5 557 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-208ENST00000538266 TOP2AP11388 1531 aaKnown RBP7.62□□□□□ -1.19
SNHG1-208ENST00000538266 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
SNHG1-208ENST00000538266 NBR1Q14596 966 aa7.62□□□□□ -1.19
SNHG1-208ENST00000538266 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
SNHG1-208ENST00000538266 HOXB3P14651 431 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-208ENST00000538266 ZNF710Q8N1W2 664 aa7.61□□□□□ -1.19
SNHG1-208ENST00000538266 RIMBP2O15034 1052 aa7.6□□□□□ -1.19
SNHG1-208ENST00000538266 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
SNHG1-208ENST00000538266 SPDYE16A6NNV3 312 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-208ENST00000538266 ARSIQ5FYB1 569 aa7.58□□□□□ -1.2
SNHG1-208ENST00000538266 SEMA3EO15041 775 aa7.57□□□□□ -1.2
SNHG1-208ENST00000538266 EVI5O60447 810 aa7.57□□□□□ -1.2
SNHG1-208ENST00000538266 ZSWIM6Q9HCJ5 1215 aa7.57□□□□□ -1.2
SNHG1-208ENST00000538266 GPR153Q6NV75 609 aa7.56□□□□□ -1.2
SNHG1-208ENST00000538266 PDIA6Q15084 440 aa7.55□□□□□ -1.2
SNHG1-208ENST00000538266 KHSRPQ92945 711 aaKnown RBP eCLIP7.55□□□□□ -1.22e-12■■■□□ 16.9
SNHG1-208ENST00000538266 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-208ENST00000538266 ANO8Q9HCE9 1232 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-208ENST00000538266 NUDT7P0C024 238 aa7.53□□□□□ -1.2
SNHG1-208ENST00000538266 ZNF316A6NFI3 1004 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-208ENST00000538266 GRXCR2A6NFK2 248 aa7.52□□□□□ -1.21
SNHG1-208ENST00000538266 HOXB1P14653 301 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-208ENST00000538266 KDM4FA0A1W2PPD8 638 aa7.51□□□□□ -1.21
SNHG1-208ENST00000538266 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-208ENST00000538266 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-208ENST00000538266 MLLT3P42568 568 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-208ENST00000538266 SMYD5Q6GMV2 418 aa7.51□□□□□ -1.21
SNHG1-208ENST00000538266 CCDC88BA6NC98 1476 aa7.5□□□□□ -1.21
SNHG1-208ENST00000538266 ST18O60284 1047 aa7.5□□□□□ -1.21
SNHG1-208ENST00000538266 PTGER2P43116 358 aa7.5□□□□□ -1.21
SNHG1-208ENST00000538266 DDX12PQ92771 950 aa7.5□□□□□ -1.21
SNHG1-208ENST00000538266 LAMC3Q9Y6N6 1575 aa7.5□□□□□ -1.21
SNHG1-208ENST00000538266 CADPSQ9ULU8 1353 aa7.47□□□□□ -1.21
SNHG1-208ENST00000538266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNHG1-208ENST00000538266 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
SNHG1-208ENST00000538266 NESP48681 1621 aa7.47□□□□□ -1.21
SNHG1-208ENST00000538266 CFTRP13569 1480 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms