RNA–Protein interactions for RNA: ENST00000538162.3

PNMA6B-201, Transcript of PNMA family member 6B (pseudogene), humanhuman

BASIC

Gene PNMA6B, Length 1,200 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6B-201ENST00000538162 EFCAB2Q5VUJ9 269 aa32.12■■■□□ 2.73
PNMA6B-201ENST00000538162 AEBP2Q6ZN18 517 aaPredicted RBP32.12■■■□□ 2.73
PNMA6B-201ENST00000538162 MTUS2Q5JR59 1369 aa32.09■■■□□ 2.73
PNMA6B-201ENST00000538162 EHBP1L1Q8N3D4 1523 aa32.07■■■□□ 2.72
PNMA6B-201ENST00000538162 SCAPERQ9BY12 1400 aa32.07■■■□□ 2.72
PNMA6B-201ENST00000538162 KDM4FA0A1W2PPD8 638 aa32.05■■■□□ 2.72
PNMA6B-201ENST00000538162 ZMYM4Q5VZL5 1548 aa32.04■■■□□ 2.72
PNMA6B-201ENST00000538162 POGZQ7Z3K3 1410 aa32.03■■■□□ 2.72
PNMA6B-201ENST00000538162 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
PNMA6B-201ENST00000538162 ARHGEF40Q8TER5 1519 aa32■■■□□ 2.71
PNMA6B-201ENST00000538162 GPATCH8Q9UKJ3 1502 aaKnown RBP31.98■■■□□ 2.71
PNMA6B-201ENST00000538162 ABCC1P33527 1531 aa31.95■■■□□ 2.71
PNMA6B-201ENST00000538162 MAGI2Q86UL8 1455 aa31.94■■■□□ 2.7
PNMA6B-201ENST00000538162 ITSN2Q9NZM3 1697 aa31.94■■■□□ 2.7
PNMA6B-201ENST00000538162 ZFYVE16Q7Z3T8 1539 aa31.94■■■□□ 2.7
PNMA6B-201ENST00000538162 CCNB3Q8WWL7 1395 aa31.94■■■□□ 2.7
PNMA6B-201ENST00000538162 SUPT6HQ7KZ85 1726 aaKnown RBP31.92■■■□□ 2.7
PNMA6B-201ENST00000538162 ZNF518AQ6AHZ1 1483 aa31.92■■■□□ 2.7
PNMA6B-201ENST00000538162 SAMD9LQ8IVG5 1584 aa31.9■■■□□ 2.7
PNMA6B-201ENST00000538162 KDM5CP41229 1560 aa31.9■■■□□ 2.7
PNMA6B-201ENST00000538162 YEATS2Q9ULM3 1422 aa31.89■■■□□ 2.7
PNMA6B-201ENST00000538162 MAP3K1Q13233 1512 aa31.89■■■□□ 2.7
PNMA6B-201ENST00000538162 ARHGEF12Q9NZN5 1544 aa31.88■■■□□ 2.69
PNMA6B-201ENST00000538162 LRRC9Q6ZRR7 1453 aa31.85■■■□□ 2.69
PNMA6B-201ENST00000538162 ZNF777Q9ULD5 760 aaPredicted RBP31.85■■■□□ 2.69
PNMA6B-201ENST00000538162 NCOA2Q15596 1464 aa31.84■■■□□ 2.69
PNMA6B-201ENST00000538162 CFDP1Q9UEE9 299 aaPredicted RBP31.84■■■□□ 2.69
PNMA6B-201ENST00000538162 HECW2Q9P2P5 1572 aa31.84■■■□□ 2.69
PNMA6B-201ENST00000538162 AFAP1Q8N556 730 aa31.83■■■□□ 2.69
PNMA6B-201ENST00000538162 TRAPPC8Q9Y2L5 1435 aa31.83■■■□□ 2.69
PNMA6B-201ENST00000538162 SYCP2Q9BX26 1530 aa31.81■■■□□ 2.68
PNMA6B-201ENST00000538162 BCORL1Q5H9F3 1711 aa31.8■■■□□ 2.68
PNMA6B-201ENST00000538162 PLEKHH2Q8IVE3 1493 aa31.79■■■□□ 2.68
PNMA6B-201ENST00000538162 SIGLEC1Q9BZZ2 1709 aa31.79■■■□□ 2.68
PNMA6B-201ENST00000538162 ARID4BQ4LE39 1312 aaPredicted RBP31.78■■■□□ 2.68
PNMA6B-201ENST00000538162 ADAMTSL3P82987 1691 aa31.77■■■□□ 2.68
PNMA6B-201ENST00000538162 MLH3Q9UHC1 1453 aa31.76■■■□□ 2.67
PNMA6B-201ENST00000538162 KIAA1107Q9UPP5 1409 aa31.75■■■□□ 2.67
PNMA6B-201ENST00000538162 ATP10AO60312 1499 aa31.75■■■□□ 2.67
PNMA6B-201ENST00000538162 KANK4Q5T7N3 995 aaPredicted RBP31.74■■■□□ 2.67
PNMA6B-201ENST00000538162 MYT1LQ9UL68 1186 aa31.73■■■□□ 2.67
PNMA6B-201ENST00000538162 C9orf84Q5VXU9 1444 aa31.73■■■□□ 2.67
PNMA6B-201ENST00000538162 DIP2CQ9Y2E4 1556 aa31.73■■■□□ 2.67
PNMA6B-201ENST00000538162 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
PNMA6B-201ENST00000538162 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
PNMA6B-201ENST00000538162 HNRNPMP52272 730 aaKnown RBP eCLIP31.71■■■□□ 2.67
PNMA6B-201ENST00000538162 APLP2Q06481 763 aa31.71■■■□□ 2.67
PNMA6B-201ENST00000538162 MADDQ8WXG6 1647 aa31.67■■■□□ 2.66
PNMA6B-201ENST00000538162 ZNF644Q9H582 1327 aaPredicted RBP31.67■■■□□ 2.66
PNMA6B-201ENST00000538162 REREQ9P2R6 1566 aa31.65■■■□□ 2.66
PNMA6B-201ENST00000538162 CAMSAP2Q08AD1 1489 aa31.64■■■□□ 2.66
PNMA6B-201ENST00000538162 INO80Q9ULG1 1556 aaPredicted RBP31.62■■■□□ 2.65
PNMA6B-201ENST00000538162 MBD5Q9P267 1494 aa31.61■■■□□ 2.65
PNMA6B-201ENST00000538162 SPAG9O60271 1321 aaKnown RBP31.61■■■□□ 2.65
PNMA6B-201ENST00000538162 ATP7AQ04656 1500 aa31.6■■■□□ 2.65
PNMA6B-201ENST00000538162 RIMS1Q86UR5 1692 aaKnown RBP31.6■■■□□ 2.65
PNMA6B-201ENST00000538162 PTPRMP28827 1452 aa31.58■■■□□ 2.65
PNMA6B-201ENST00000538162 FER1L4A9Z1Z3 1794 aa31.57■■■□□ 2.64
PNMA6B-201ENST00000538162 MYOM3Q5VTT5 1437 aa31.56■■■□□ 2.64
PNMA6B-201ENST00000538162 MLECQ14165 292 aa31.55■■■□□ 2.64
PNMA6B-201ENST00000538162 AGLP35573 1532 aa31.53■■■□□ 2.64
PNMA6B-201ENST00000538162 CCDC141Q6ZP82 1450 aa31.52■■■□□ 2.64
PNMA6B-201ENST00000538162 MIA2Q96PC5 1412 aa31.52■■■□□ 2.64
PNMA6B-201ENST00000538162 ARHGEF5Q12774 1597 aa31.51■■■□□ 2.64
PNMA6B-201ENST00000538162 ADGBQ8N7X0 1667 aa31.48■■■□□ 2.63
PNMA6B-201ENST00000538162 RSPH4AQ5TD94 716 aa31.46■■■□□ 2.63
PNMA6B-201ENST00000538162 RTEL1-TNFRSF6BF6WH68 1400 aa31.46■■■□□ 2.63
PNMA6B-201ENST00000538162 PLXNC1O60486 1568 aa31.44■■■□□ 2.62
PNMA6B-201ENST00000538162 A2MP01023 1474 aa31.43■■■□□ 2.62
PNMA6B-201ENST00000538162 PTPN23Q9H3S7 1636 aa31.41■■■□□ 2.62
PNMA6B-201ENST00000538162 FGD6Q6ZV73 1430 aa31.36■■■□□ 2.61
PNMA6B-201ENST00000538162 MAST1Q9Y2H9 1570 aa31.35■■■□□ 2.61
PNMA6B-201ENST00000538162 TSPY4P0CV99 314 aa31.34■■■□□ 2.61
PNMA6B-201ENST00000538162 TSPY10P0CW01 314 aa31.34■■■□□ 2.61
PNMA6B-201ENST00000538162 PLPPR3Q6T4P5 718 aa31.32■■■□□ 2.6
PNMA6B-201ENST00000538162 TCOF1Q13428 1488 aaKnown RBP31.31■■■□□ 2.6
PNMA6B-201ENST00000538162 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
PNMA6B-201ENST00000538162 DHX29Q7Z478 1369 aaKnown RBP31.29■■■□□ 2.6
PNMA6B-201ENST00000538162 ESF1Q9H501 851 aaKnown RBP31.27■■■□□ 2.6
PNMA6B-201ENST00000538162 C3P01024 1663 aa31.26■■■□□ 2.6
PNMA6B-201ENST00000538162 DNMT1P26358 1616 aaKnown RBP31.26■■■□□ 2.59
PNMA6B-201ENST00000538162 CNTLNQ9NXG0 1405 aa31.24■■■□□ 2.59
PNMA6B-201ENST00000538162 MROH2AA6NES4 1674 aa31.23■■■□□ 2.59
PNMA6B-201ENST00000538162 SHANK2Q9UPX8 1470 aa31.22■■■□□ 2.59
PNMA6B-201ENST00000538162 ABCC5O15440 1437 aa31.22■■■□□ 2.59
PNMA6B-201ENST00000538162 CEBPAP49715 358 aaPredicted RBP31.21■■■□□ 2.59
PNMA6B-201ENST00000538162 CLTCQ00610 1675 aaKnown RBP31.21■■■□□ 2.59
PNMA6B-201ENST00000538162 DAPK1P53355 1430 aa31.2■■■□□ 2.59
PNMA6B-201ENST00000538162 GGT6Q6P531 493 aa31.19■■■□□ 2.58
PNMA6B-201ENST00000538162 LMTK3Q96Q04 1460 aa31.19■■■□□ 2.58
PNMA6B-201ENST00000538162 PREX1Q8TCU6 1659 aa31.16■■■□□ 2.58
PNMA6B-201ENST00000538162 KIF3BO15066 747 aa31.14■■■□□ 2.58
PNMA6B-201ENST00000538162 EIF2AK4Q9P2K8 1649 aaKnown RBP31.13■■■□□ 2.57
PNMA6B-201ENST00000538162 SETD1BQ9UPS6 1966 aaKnown RBP31.13■■■□□ 2.57
PNMA6B-201ENST00000538162 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
PNMA6B-201ENST00000538162 PPP6R1Q9UPN7 881 aa31.12■■■□□ 2.57
PNMA6B-201ENST00000538162 DUOX2Q9NRD8 1548 aa31.11■■■□□ 2.57
PNMA6B-201ENST00000538162 FAM50AQ14320 339 aaKnown RBP31.1■■■□□ 2.57
PNMA6B-201ENST00000538162 ZMYM3Q14202 1370 aa31.09■■■□□ 2.57
PNMA6B-201ENST00000538162 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms