RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 PLCG2P16885 1265 aa9.53□□□□□ -0.88
NPIPB3-208ENST00000537983 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
NPIPB3-208ENST00000537983 BCANQ96GW7 911 aa9.53□□□□□ -0.88
NPIPB3-208ENST00000537983 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
NPIPB3-208ENST00000537983 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
NPIPB3-208ENST00000537983 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
NPIPB3-208ENST00000537983 COLQQ9Y215 455 aaPredicted RBP9.52□□□□□ -0.89
NPIPB3-208ENST00000537983 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
NPIPB3-208ENST00000537983 TMEM121BQ9BXQ6 578 aaPredicted RBP9.51□□□□□ -0.89
NPIPB3-208ENST00000537983 C7P10643 843 aa9.5□□□□□ -0.89
NPIPB3-208ENST00000537983 MFSD10Q14728 455 aa9.5□□□□□ -0.89
NPIPB3-208ENST00000537983 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
NPIPB3-208ENST00000537983 SMARCA4P51532 1647 aa9.49□□□□□ -0.89
NPIPB3-208ENST00000537983 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
NPIPB3-208ENST00000537983 METRNQ9UJH8 293 aa9.48□□□□□ -0.89
NPIPB3-208ENST00000537983 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
NPIPB3-208ENST00000537983 SEC24BO95487 1268 aa9.47□□□□□ -0.89
NPIPB3-208ENST00000537983 PDE4AP27815 886 aa9.47□□□□□ -0.89
NPIPB3-208ENST00000537983 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
NPIPB3-208ENST00000537983 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
NPIPB3-208ENST00000537983 L3MBTL3Q96JM7 780 aaPredicted RBP9.45□□□□□ -0.9
NPIPB3-208ENST00000537983 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
NPIPB3-208ENST00000537983 WIZO95785 1651 aa9.43□□□□□ -0.9
NPIPB3-208ENST00000537983 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
NPIPB3-208ENST00000537983 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
NPIPB3-208ENST00000537983 E2F4Q16254 413 aa9.41□□□□□ -0.9
NPIPB3-208ENST00000537983 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
NPIPB3-208ENST00000537983 G3V3G9 751 aa9.4□□□□□ -0.9
NPIPB3-208ENST00000537983 KIF3CO14782 793 aa9.4□□□□□ -0.9
NPIPB3-208ENST00000537983 NBR1Q14596 966 aa9.4□□□□□ -0.9
NPIPB3-208ENST00000537983 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
NPIPB3-208ENST00000537983 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
NPIPB3-208ENST00000537983 TOP2AP11388 1531 aaKnown RBP9.39□□□□□ -0.91
NPIPB3-208ENST00000537983 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
NPIPB3-208ENST00000537983 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
NPIPB3-208ENST00000537983 DSG2Q14126 1118 aa9.37□□□□□ -0.91
NPIPB3-208ENST00000537983 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
NPIPB3-208ENST00000537983 FOXK1P85037 733 aa9.36□□□□□ -0.91
NPIPB3-208ENST00000537983 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-208ENST00000537983 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
NPIPB3-208ENST00000537983 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
NPIPB3-208ENST00000537983 C3orf67Q6ZVT6 689 aa9.31□□□□□ -0.92
NPIPB3-208ENST00000537983 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
NPIPB3-208ENST00000537983 EMILIN3Q9NT22 766 aa9.3□□□□□ -0.92
NPIPB3-208ENST00000537983 EIF4G1Q04637 1599 aaKnown RBP9.29□□□□□ -0.92
NPIPB3-208ENST00000537983 ATAD2BQ9ULI0 1458 aa9.29□□□□□ -0.92
NPIPB3-208ENST00000537983 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
NPIPB3-208ENST00000537983 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
NPIPB3-208ENST00000537983 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
NPIPB3-208ENST00000537983 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-208ENST00000537983 BAZ1BQ9UIG0 1483 aaKnown RBP9.25□□□□□ -0.93
NPIPB3-208ENST00000537983 TESPA1A2RU30 521 aaPredicted RBP9.24□□□□□ -0.93
NPIPB3-208ENST00000537983 DPYSL4O14531 572 aa9.23□□□□□ -0.93
NPIPB3-208ENST00000537983 SEMA3EO15041 775 aa9.23□□□□□ -0.93
NPIPB3-208ENST00000537983 CCDC88BA6NC98 1476 aa9.22□□□□□ -0.93
NPIPB3-208ENST00000537983 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
NPIPB3-208ENST00000537983 PDIA6Q15084 440 aa9.21□□□□□ -0.94
NPIPB3-208ENST00000537983 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
NPIPB3-208ENST00000537983 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
NPIPB3-208ENST00000537983 TPRNQ4KMQ1 711 aa9.2□□□□□ -0.94
NPIPB3-208ENST00000537983 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
NPIPB3-208ENST00000537983 SLC34A2O95436 690 aa9.18□□□□□ -0.94
NPIPB3-208ENST00000537983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPIPB3-208ENST00000537983 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
NPIPB3-208ENST00000537983 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
NPIPB3-208ENST00000537983 LMOD2Q6P5Q4 547 aa9.16□□□□□ -0.94
NPIPB3-208ENST00000537983 MLLT3P42568 568 aaPredicted RBP9.15□□□□□ -0.94
NPIPB3-208ENST00000537983 MAP3K9P80192 1104 aa9.15□□□□□ -0.94
NPIPB3-208ENST00000537983 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.94
NPIPB3-208ENST00000537983 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
NPIPB3-208ENST00000537983 SLAIN1Q8ND83 568 aa9.13□□□□□ -0.95
NPIPB3-208ENST00000537983 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
NPIPB3-208ENST00000537983 TULP1O00294 542 aaPredicted RBP9.12□□□□□ -0.95
NPIPB3-208ENST00000537983 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
NPIPB3-208ENST00000537983 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
NPIPB3-208ENST00000537983 TBC1D12O60347 775 aa9.09□□□□□ -0.95
NPIPB3-208ENST00000537983 EVI5O60447 810 aa9.09□□□□□ -0.95
NPIPB3-208ENST00000537983 PTGER2P43116 358 aa9.09□□□□□ -0.95
NPIPB3-208ENST00000537983 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
NPIPB3-208ENST00000537983 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
NPIPB3-208ENST00000537983 OTUD5Q96G74 571 aa9.07□□□□□ -0.96
NPIPB3-208ENST00000537983 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
NPIPB3-208ENST00000537983 PRDM2Q13029 1718 aa9.06□□□□□ -0.96
NPIPB3-208ENST00000537983 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
NPIPB3-208ENST00000537983 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
NPIPB3-208ENST00000537983 ABCC8Q09428 1581 aa9.04□□□□□ -0.96
NPIPB3-208ENST00000537983 ZNF316A6NFI3 1004 aaPredicted RBP9.04□□□□□ -0.96
NPIPB3-208ENST00000537983 ZC3H15Q8WU90 426 aaKnown RBP9.04□□□□□ -0.96
NPIPB3-208ENST00000537983 GRXCR2A6NFK2 248 aa9.03□□□□□ -0.96
NPIPB3-208ENST00000537983 OSBPP22059 807 aa9.03□□□□□ -0.96
NPIPB3-208ENST00000537983 LHX8Q68G74 356 aa9.03□□□□□ -0.96
NPIPB3-208ENST00000537983 DDX12PQ92771 950 aa9.03□□□□□ -0.96
NPIPB3-208ENST00000537983 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
NPIPB3-208ENST00000537983 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
NPIPB3-208ENST00000537983 GPR153Q6NV75 609 aa9.02□□□□□ -0.97
NPIPB3-208ENST00000537983 CFTRP13569 1480 aa9.02□□□□□ -0.97
NPIPB3-208ENST00000537983 WRNQ14191 1432 aaPredicted RBP eCLIP9.01□□□□□ -0.97
NPIPB3-208ENST00000537983 KHSRPQ92945 711 aaKnown RBP eCLIP9□□□□□ -0.97
NPIPB3-208ENST00000537983 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
NPIPB3-208ENST00000537983 GPR37O15354 613 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms