RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
SRGAP1-203ENST00000537585 KIF3CO14782 793 aa12.88□□□□□ -0.35
SRGAP1-203ENST00000537585 EMP3P54852 163 aa12.88□□□□□ -0.35
SRGAP1-203ENST00000537585 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
SRGAP1-203ENST00000537585 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
SRGAP1-203ENST00000537585 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
SRGAP1-203ENST00000537585 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
SRGAP1-203ENST00000537585 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
SRGAP1-203ENST00000537585 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.36
SRGAP1-203ENST00000537585 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
SRGAP1-203ENST00000537585 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
SRGAP1-203ENST00000537585 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
SRGAP1-203ENST00000537585 PCDH10Q9P2E7 1040 aa12.8□□□□□ -0.36
SRGAP1-203ENST00000537585 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
SRGAP1-203ENST00000537585 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
SRGAP1-203ENST00000537585 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
SRGAP1-203ENST00000537585 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
SRGAP1-203ENST00000537585 KRTAP3-3Q9BYR6 98 aa12.73□□□□□ -0.37
SRGAP1-203ENST00000537585 KRTAP3-2Q9BYR7 98 aa12.73□□□□□ -0.37
SRGAP1-203ENST00000537585 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
SRGAP1-203ENST00000537585 ERBB3P21860 1342 aa12.69□□□□□ -0.38
SRGAP1-203ENST00000537585 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
SRGAP1-203ENST00000537585 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
SRGAP1-203ENST00000537585 DSG2Q14126 1118 aa12.67□□□□□ -0.38
SRGAP1-203ENST00000537585 NUDT7P0C024 238 aa12.65□□□□□ -0.38
SRGAP1-203ENST00000537585 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
SRGAP1-203ENST00000537585 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
SRGAP1-203ENST00000537585 PCDHGA4Q9Y5G9 962 aa12.64□□□□□ -0.39
SRGAP1-203ENST00000537585 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
SRGAP1-203ENST00000537585 FOXK1P85037 733 aa12.62□□□□□ -0.39
SRGAP1-203ENST00000537585 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
SRGAP1-203ENST00000537585 CADPS2Q86UW7 1296 aa12.62□□□□□ -0.39
SRGAP1-203ENST00000537585 SPNS2Q8IVW8 549 aa12.61□□□□□ -0.39
SRGAP1-203ENST00000537585 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
SRGAP1-203ENST00000537585 SLC34A2O95436 690 aa12.6□□□□□ -0.39
SRGAP1-203ENST00000537585 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
SRGAP1-203ENST00000537585 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
SRGAP1-203ENST00000537585 LHX6Q9UPM6 363 aa12.56□□□□□ -0.4
SRGAP1-203ENST00000537585 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
SRGAP1-203ENST00000537585 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
SRGAP1-203ENST00000537585 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
SRGAP1-203ENST00000537585 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
SRGAP1-203ENST00000537585 PTCD2Q8WV60 388 aaKnown RBP12.52□□□□□ -0.41
SRGAP1-203ENST00000537585 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
SRGAP1-203ENST00000537585 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRGAP1-203ENST00000537585 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
SRGAP1-203ENST00000537585 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
SRGAP1-203ENST00000537585 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
SRGAP1-203ENST00000537585 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
SRGAP1-203ENST00000537585 PDE4AP27815 886 aa12.43□□□□□ -0.42
SRGAP1-203ENST00000537585 MFSD10Q14728 455 aa12.43□□□□□ -0.42
SRGAP1-203ENST00000537585 DDX27Q96GQ7 796 aaKnown RBP12.42□□□□□ -0.42
SRGAP1-203ENST00000537585 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
SRGAP1-203ENST00000537585 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
SRGAP1-203ENST00000537585 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
SRGAP1-203ENST00000537585 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
SRGAP1-203ENST00000537585 PSEN2P49810 448 aa12.34□□□□□ -0.43
SRGAP1-203ENST00000537585 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
SRGAP1-203ENST00000537585 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
SRGAP1-203ENST00000537585 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
SRGAP1-203ENST00000537585 TBC1D12O60347 775 aa12.31□□□□□ -0.44
SRGAP1-203ENST00000537585 EVI5O60447 810 aa12.29□□□□□ -0.44
SRGAP1-203ENST00000537585 PBX2P40425 430 aa12.28□□□□□ -0.44
SRGAP1-203ENST00000537585 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
SRGAP1-203ENST00000537585 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SRGAP1-203ENST00000537585 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
SRGAP1-203ENST00000537585 ARHGAP33O14559 1287 aa12.25□□□□□ -0.45
SRGAP1-203ENST00000537585 FOSBP53539 338 aa12.25□□□□□ -0.45
SRGAP1-203ENST00000537585 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
SRGAP1-203ENST00000537585 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
SRGAP1-203ENST00000537585 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
SRGAP1-203ENST00000537585 DPYSL4O14531 572 aa12.24□□□□□ -0.45
SRGAP1-203ENST00000537585 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
SRGAP1-203ENST00000537585 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
SRGAP1-203ENST00000537585 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
SRGAP1-203ENST00000537585 MAP3K9P80192 1104 aa12.23□□□□□ -0.45
SRGAP1-203ENST00000537585 ADGRD1Q6QNK2 874 aa12.21□□□□□ -0.45
SRGAP1-203ENST00000537585 ADAM33Q9BZ11 813 aa12.2□□□□□ -0.46
SRGAP1-203ENST00000537585 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
SRGAP1-203ENST00000537585 PCDHGA10Q9Y5H3 936 aa12.17□□□□□ -0.46
SRGAP1-203ENST00000537585 BCL2L12Q9HB09 334 aa12.16□□□□□ -0.46
SRGAP1-203ENST00000537585 HRO43593 1189 aa12.15□□□□□ -0.46
SRGAP1-203ENST00000537585 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
SRGAP1-203ENST00000537585 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
SRGAP1-203ENST00000537585 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
SRGAP1-203ENST00000537585 PTGER2P43116 358 aa12.1□□□□□ -0.47
SRGAP1-203ENST00000537585 TK2O00142 265 aa12.09□□□□□ -0.47
SRGAP1-203ENST00000537585 COL9A1P20849 921 aa12.09□□□□□ -0.47
SRGAP1-203ENST00000537585 DDX12PQ92771 950 aa12.09□□□□□ -0.47
SRGAP1-203ENST00000537585 PTPREP23469 700 aa12.08□□□□□ -0.48
SRGAP1-203ENST00000537585 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
SRGAP1-203ENST00000537585 E2F4Q16254 413 aa12.06□□□□□ -0.48
SRGAP1-203ENST00000537585 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
SRGAP1-203ENST00000537585 PDIA6Q15084 440 aa12.05□□□□□ -0.48
SRGAP1-203ENST00000537585 PHF14O94880 888 aa12.04□□□□□ -0.48
SRGAP1-203ENST00000537585 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
SRGAP1-203ENST00000537585 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
SRGAP1-203ENST00000537585 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
SRGAP1-203ENST00000537585 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
SRGAP1-203ENST00000537585 KCNH8Q96L42 1107 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms