RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
GPN3-202ENST00000537466 EHBP1L1Q8N3D4 1523 aa27.55■■■□□ 2
GPN3-202ENST00000537466 EFCAB2Q5VUJ9 269 aa27.55■■■□□ 2
GPN3-202ENST00000537466 TIAM1Q13009 1591 aa27.54■■■□□ 2
GPN3-202ENST00000537466 SCAPERQ9BY12 1400 aa27.53■■■□□ 2
GPN3-202ENST00000537466 ZMYM4Q5VZL5 1548 aa27.48■■□□□ 1.99
GPN3-202ENST00000537466 KDM4FA0A1W2PPD8 638 aa27.48■■□□□ 1.99
GPN3-202ENST00000537466 POGZQ7Z3K3 1410 aa27.48■■□□□ 1.99
GPN3-202ENST00000537466 GPATCH8Q9UKJ3 1502 aaKnown RBP27.48■■□□□ 1.99
GPN3-202ENST00000537466 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.99
GPN3-202ENST00000537466 ABCC1P33527 1531 aa27.45■■□□□ 1.98
GPN3-202ENST00000537466 ARHGEF40Q8TER5 1519 aa27.45■■□□□ 1.98
GPN3-202ENST00000537466 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
GPN3-202ENST00000537466 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
GPN3-202ENST00000537466 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
GPN3-202ENST00000537466 CCNB3Q8WWL7 1395 aa27.42■■□□□ 1.98
GPN3-202ENST00000537466 MAP3K1Q13233 1512 aa27.4■■□□□ 1.98
GPN3-202ENST00000537466 ARHGEF12Q9NZN5 1544 aa27.4■■□□□ 1.98
GPN3-202ENST00000537466 ZFYVE16Q7Z3T8 1539 aa27.4■■□□□ 1.98
GPN3-202ENST00000537466 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
GPN3-202ENST00000537466 KDM5CP41229 1560 aa27.39■■□□□ 1.97
GPN3-202ENST00000537466 ZNF518AQ6AHZ1 1483 aa27.38■■□□□ 1.97
GPN3-202ENST00000537466 YEATS2Q9ULM3 1422 aa27.38■■□□□ 1.97
GPN3-202ENST00000537466 NCOA2Q15596 1464 aa27.37■■□□□ 1.97
GPN3-202ENST00000537466 MAGI2Q86UL8 1455 aa27.36■■□□□ 1.97
GPN3-202ENST00000537466 ZNF777Q9ULD5 760 aaPredicted RBP27.36■■□□□ 1.97
GPN3-202ENST00000537466 SIGLEC1Q9BZZ2 1709 aa27.36■■□□□ 1.97
GPN3-202ENST00000537466 AFAP1Q8N556 730 aa27.35■■□□□ 1.97
GPN3-202ENST00000537466 CFDP1Q9UEE9 299 aaPredicted RBP27.34■■□□□ 1.97
GPN3-202ENST00000537466 TRAPPC8Q9Y2L5 1435 aa27.34■■□□□ 1.97
GPN3-202ENST00000537466 SYCP2Q9BX26 1530 aa27.34■■□□□ 1.97
GPN3-202ENST00000537466 KANK4Q5T7N3 995 aaPredicted RBP27.33■■□□□ 1.97
GPN3-202ENST00000537466 HECW2Q9P2P5 1572 aa27.33■■□□□ 1.96
GPN3-202ENST00000537466 BCORL1Q5H9F3 1711 aa27.29■■□□□ 1.96
GPN3-202ENST00000537466 ADAMTSL3P82987 1691 aa27.26■■□□□ 1.95
GPN3-202ENST00000537466 KIDINS220Q9ULH0 1771 aa27.26■■□□□ 1.95
GPN3-202ENST00000537466 ABCA6Q8N139 1617 aa27.26■■□□□ 1.95
GPN3-202ENST00000537466 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
GPN3-202ENST00000537466 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
GPN3-202ENST00000537466 DIP2CQ9Y2E4 1556 aa27.25■■□□□ 1.95
GPN3-202ENST00000537466 KIAA1107Q9UPP5 1409 aa27.25■■□□□ 1.95
GPN3-202ENST00000537466 HNRNPMP52272 730 aaKnown RBP eCLIP27.25■■□□□ 1.95
GPN3-202ENST00000537466 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
GPN3-202ENST00000537466 ATP10AO60312 1499 aa27.24■■□□□ 1.95
GPN3-202ENST00000537466 ARID4BQ4LE39 1312 aaPredicted RBP27.23■■□□□ 1.95
GPN3-202ENST00000537466 APLP2Q06481 763 aa27.23■■□□□ 1.95
GPN3-202ENST00000537466 MYT1LQ9UL68 1186 aa27.21■■□□□ 1.95
GPN3-202ENST00000537466 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
GPN3-202ENST00000537466 MADDQ8WXG6 1647 aa27.18■■□□□ 1.94
GPN3-202ENST00000537466 CAMSAP2Q08AD1 1489 aa27.18■■□□□ 1.94
GPN3-202ENST00000537466 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
GPN3-202ENST00000537466 INO80Q9ULG1 1556 aaPredicted RBP27.16■■□□□ 1.94
GPN3-202ENST00000537466 REREQ9P2R6 1566 aa27.15■■□□□ 1.94
GPN3-202ENST00000537466 ATP7AQ04656 1500 aa27.14■■□□□ 1.93
GPN3-202ENST00000537466 SPAG9O60271 1321 aaKnown RBP27.12■■□□□ 1.93
GPN3-202ENST00000537466 MYOM3Q5VTT5 1437 aa27.12■■□□□ 1.93
GPN3-202ENST00000537466 RIMS1Q86UR5 1692 aaKnown RBP27.12■■□□□ 1.93
GPN3-202ENST00000537466 FER1L4A9Z1Z3 1794 aa27.1■■□□□ 1.93
GPN3-202ENST00000537466 MLECQ14165 292 aa27.07■■□□□ 1.92
GPN3-202ENST00000537466 PTPRMP28827 1452 aa27.07■■□□□ 1.92
GPN3-202ENST00000537466 MIA2Q96PC5 1412 aa27.07■■□□□ 1.92
GPN3-202ENST00000537466 ARHGEF5Q12774 1597 aa27.07■■□□□ 1.92
GPN3-202ENST00000537466 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
GPN3-202ENST00000537466 AGLP35573 1532 aa27.04■■□□□ 1.92
GPN3-202ENST00000537466 ADGBQ8N7X0 1667 aa27.04■■□□□ 1.92
GPN3-202ENST00000537466 PTPN23Q9H3S7 1636 aa27.01■■□□□ 1.92
GPN3-202ENST00000537466 PLXNC1O60486 1568 aa27■■□□□ 1.91
GPN3-202ENST00000537466 RTEL1-TNFRSF6BF6WH68 1400 aa27■■□□□ 1.91
GPN3-202ENST00000537466 RSPH4AQ5TD94 716 aa26.98■■□□□ 1.91
GPN3-202ENST00000537466 A2MP01023 1474 aa26.97■■□□□ 1.91
GPN3-202ENST00000537466 FGD6Q6ZV73 1430 aa26.96■■□□□ 1.91
GPN3-202ENST00000537466 MAST1Q9Y2H9 1570 aa26.93■■□□□ 1.9
GPN3-202ENST00000537466 CROCC2H7BZ55 1655 aa26.93■■□□□ 1.9
GPN3-202ENST00000537466 TCOF1Q13428 1488 aaKnown RBP26.92■■□□□ 1.9
GPN3-202ENST00000537466 TSPY4P0CV99 314 aa26.89■■□□□ 1.9
GPN3-202ENST00000537466 TSPY10P0CW01 314 aa26.89■■□□□ 1.9
GPN3-202ENST00000537466 DNMT1P26358 1616 aaKnown RBP26.88■■□□□ 1.89
GPN3-202ENST00000537466 PLPPR3Q6T4P5 718 aa26.87■■□□□ 1.89
GPN3-202ENST00000537466 C3P01024 1663 aa26.85■■□□□ 1.89
GPN3-202ENST00000537466 DHX29Q7Z478 1369 aaKnown RBP26.85■■□□□ 1.89
GPN3-202ENST00000537466 PPARGC1BQ86YN6 1023 aaKnown RBP26.85■■□□□ 1.89
GPN3-202ENST00000537466 ABCC5O15440 1437 aa26.85■■□□□ 1.89
GPN3-202ENST00000537466 DAPK1P53355 1430 aa26.82■■□□□ 1.88
GPN3-202ENST00000537466 CLTCQ00610 1675 aaKnown RBP26.82■■□□□ 1.88
GPN3-202ENST00000537466 SHANK2Q9UPX8 1470 aa26.81■■□□□ 1.88
GPN3-202ENST00000537466 CEBPAP49715 358 aaPredicted RBP26.81■■□□□ 1.88
GPN3-202ENST00000537466 MROH2AA6NES4 1674 aa26.8■■□□□ 1.88
GPN3-202ENST00000537466 GGT6Q6P531 493 aa26.78■■□□□ 1.88
GPN3-202ENST00000537466 ESF1Q9H501 851 aaKnown RBP26.77■■□□□ 1.88
GPN3-202ENST00000537466 CNTLNQ9NXG0 1405 aa26.76■■□□□ 1.87
GPN3-202ENST00000537466 KIF3BO15066 747 aa26.74■■□□□ 1.87
GPN3-202ENST00000537466 FAM50AQ14320 339 aaKnown RBP26.74■■□□□ 1.87
GPN3-202ENST00000537466 LMTK3Q96Q04 1460 aa26.74■■□□□ 1.87
GPN3-202ENST00000537466 EIF2AK4Q9P2K8 1649 aaKnown RBP26.73■■□□□ 1.87
GPN3-202ENST00000537466 PREX1Q8TCU6 1659 aa26.73■■□□□ 1.87
GPN3-202ENST00000537466 DUOX2Q9NRD8 1548 aa26.72■■□□□ 1.87
GPN3-202ENST00000537466 RNF17Q9BXT8 1623 aaKnown RBP26.71■■□□□ 1.87
GPN3-202ENST00000537466 SETD1BQ9UPS6 1966 aaKnown RBP26.7■■□□□ 1.87
GPN3-202ENST00000537466 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
GPN3-202ENST00000537466 KIF15Q9NS87 1388 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms