RNA–Protein interactions for RNA: ENST00000536880.5

LDHC-204, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-204ENST00000536880 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
LDHC-204ENST00000536880 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
LDHC-204ENST00000536880 RGL2O15211 777 aa12.97□□□□□ -0.33
LDHC-204ENST00000536880 ERCC6L2Q5T890 1561 aa12.96□□□□□ -0.33
LDHC-204ENST00000536880 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
LDHC-204ENST00000536880 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
LDHC-204ENST00000536880 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
LDHC-204ENST00000536880 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
LDHC-204ENST00000536880 CEP170Q5SW79 1584 aa12.93□□□□□ -0.34
LDHC-204ENST00000536880 TRPC6Q9Y210 931 aa12.92□□□□□ -0.34
LDHC-204ENST00000536880 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
LDHC-204ENST00000536880 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
LDHC-204ENST00000536880 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
LDHC-204ENST00000536880 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
LDHC-204ENST00000536880 NUP160Q12769 1436 aa12.89□□□□□ -0.35
LDHC-204ENST00000536880 PSEN1P49768 467 aa12.89□□□□□ -0.35
LDHC-204ENST00000536880 KIF13AQ9H1H9 1805 aa12.89□□□□□ -0.35
LDHC-204ENST00000536880 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
LDHC-204ENST00000536880 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
LDHC-204ENST00000536880 TIE1P35590 1138 aa12.87□□□□□ -0.35
LDHC-204ENST00000536880 TOP2BQ02880 1626 aa12.87□□□□□ -0.35
LDHC-204ENST00000536880 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
LDHC-204ENST00000536880 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
LDHC-204ENST00000536880 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
LDHC-204ENST00000536880 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
LDHC-204ENST00000536880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
LDHC-204ENST00000536880 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
LDHC-204ENST00000536880 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
LDHC-204ENST00000536880 ATMINO43313 823 aaPredicted RBP12.81□□□□□ -0.36
LDHC-204ENST00000536880 ATN1P54259 1190 aaPredicted RBP12.8□□□□□ -0.36
LDHC-204ENST00000536880 STK25O00506 426 aa12.79□□□□□ -0.36
LDHC-204ENST00000536880 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
LDHC-204ENST00000536880 ASTLQ6HA08 431 aaPredicted RBP12.79□□□□□ -0.36
LDHC-204ENST00000536880 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
LDHC-204ENST00000536880 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
LDHC-204ENST00000536880 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
LDHC-204ENST00000536880 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.37
LDHC-204ENST00000536880 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
LDHC-204ENST00000536880 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
LDHC-204ENST00000536880 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
LDHC-204ENST00000536880 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
LDHC-204ENST00000536880 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
LDHC-204ENST00000536880 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
LDHC-204ENST00000536880 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
LDHC-204ENST00000536880 JPH4Q96JJ6 628 aa12.71□□□□□ -0.37
LDHC-204ENST00000536880 DIP2BQ9P265 1576 aa12.71□□□□□ -0.37
LDHC-204ENST00000536880 MAPKBP1O60336 1514 aa12.71□□□□□ -0.38
LDHC-204ENST00000536880 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
LDHC-204ENST00000536880 ABCC10Q5T3U5 1492 aa12.7□□□□□ -0.38
LDHC-204ENST00000536880 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
LDHC-204ENST00000536880 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
LDHC-204ENST00000536880 TSPOAP1O95153 1857 aa12.68□□□□□ -0.38
LDHC-204ENST00000536880 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
LDHC-204ENST00000536880 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
LDHC-204ENST00000536880 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
LDHC-204ENST00000536880 KDM6BO15054 1643 aa12.65□□□□□ -0.38
LDHC-204ENST00000536880 C7P10643 843 aa12.64□□□□□ -0.39
LDHC-204ENST00000536880 IER5LQ5T953 404 aa12.64□□□□□ -0.39
LDHC-204ENST00000536880 CUL7Q14999 1698 aa12.64□□□□□ -0.39
LDHC-204ENST00000536880 SEC24BO95487 1268 aa12.63□□□□□ -0.39
LDHC-204ENST00000536880 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
LDHC-204ENST00000536880 PLCG2P16885 1265 aa12.59□□□□□ -0.39
LDHC-204ENST00000536880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.39
LDHC-204ENST00000536880 IGF1RP08069 1367 aa12.56□□□□□ -0.4
LDHC-204ENST00000536880 SOX12O15370 315 aa12.56□□□□□ -0.4
LDHC-204ENST00000536880 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
LDHC-204ENST00000536880 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
LDHC-204ENST00000536880 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
LDHC-204ENST00000536880 IRX5P78411 483 aaPredicted RBP12.54□□□□□ -0.4
LDHC-204ENST00000536880 OCEL1Q9H607 264 aa12.54□□□□□ -0.4
LDHC-204ENST00000536880 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
LDHC-204ENST00000536880 PHF8Q9UPP1 1060 aa12.53□□□□□ -0.4
LDHC-204ENST00000536880 NLRP6P59044 892 aa12.52□□□□□ -0.41
LDHC-204ENST00000536880 PTPRGP23470 1445 aa12.52□□□□□ -0.41
LDHC-204ENST00000536880 ABCC2Q92887 1545 aa12.52□□□□□ -0.41
LDHC-204ENST00000536880 GLI2P10070 1586 aa12.51□□□□□ -0.41
LDHC-204ENST00000536880 IQGAP2Q13576 1575 aa12.51□□□□□ -0.41
LDHC-204ENST00000536880 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
LDHC-204ENST00000536880 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
LDHC-204ENST00000536880 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
LDHC-204ENST00000536880 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
LDHC-204ENST00000536880 ASXL2Q76L83 1435 aa12.48□□□□□ -0.41
LDHC-204ENST00000536880 CARMIL1Q5VZK9 1371 aa12.48□□□□□ -0.41
LDHC-204ENST00000536880 TTBK1Q5TCY1 1321 aaPredicted RBP12.48□□□□□ -0.41
LDHC-204ENST00000536880 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
LDHC-204ENST00000536880 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
LDHC-204ENST00000536880 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
LDHC-204ENST00000536880 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
LDHC-204ENST00000536880 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
LDHC-204ENST00000536880 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.41
LDHC-204ENST00000536880 MAP3K4Q9Y6R4 1608 aa12.46□□□□□ -0.41
LDHC-204ENST00000536880 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
LDHC-204ENST00000536880 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
LDHC-204ENST00000536880 G3V3G9 751 aa12.44□□□□□ -0.42
LDHC-204ENST00000536880 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
LDHC-204ENST00000536880 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
LDHC-204ENST00000536880 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
LDHC-204ENST00000536880 ADGRL1O94910 1474 aa12.44□□□□□ -0.42
LDHC-204ENST00000536880 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
LDHC-204ENST00000536880 UACAQ9BZF9 1416 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms