RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 APLP2Q06481 763 aa33.03■■■□□ 2.88
LPCAT3-204ENST00000536797 LRRC9Q6ZRR7 1453 aa33.02■■■□□ 2.88
LPCAT3-204ENST00000536797 SUPT6HQ7KZ85 1726 aaKnown RBP33.01■■■□□ 2.88
LPCAT3-204ENST00000536797 ADGRL1O94910 1474 aa33■■■□□ 2.87
LPCAT3-204ENST00000536797 CCNB3Q8WWL7 1395 aa33■■■□□ 2.87
LPCAT3-204ENST00000536797 DENND4BO75064 1496 aaPredicted RBP32.99■■■□□ 2.87
LPCAT3-204ENST00000536797 GPATCH8Q9UKJ3 1502 aaKnown RBP32.98■■■□□ 2.87
LPCAT3-204ENST00000536797 RAPGEF3O95398 923 aa32.97■■■□□ 2.87
LPCAT3-204ENST00000536797 FRMPD1Q5SYB0 1578 aa32.95■■■□□ 2.87
LPCAT3-204ENST00000536797 SCAPERQ9BY12 1400 aa32.94■■■□□ 2.86
LPCAT3-204ENST00000536797 RICTORQ6R327 1708 aa32.94■■■□□ 2.86
LPCAT3-204ENST00000536797 NCOA2Q15596 1464 aa32.94■■■□□ 2.86
LPCAT3-204ENST00000536797 KANK4Q5T7N3 995 aaPredicted RBP32.93■■■□□ 2.86
LPCAT3-204ENST00000536797 ITSN2Q9NZM3 1697 aa32.92■■■□□ 2.86
LPCAT3-204ENST00000536797 CFDP1Q9UEE9 299 aaPredicted RBP32.88■■■□□ 2.85
LPCAT3-204ENST00000536797 POGZQ7Z3K3 1410 aa32.87■■■□□ 2.85
LPCAT3-204ENST00000536797 ABCC1P33527 1531 aa32.86■■■□□ 2.85
LPCAT3-204ENST00000536797 ZNF777Q9ULD5 760 aaPredicted RBP32.85■■■□□ 2.85
LPCAT3-204ENST00000536797 SAMD9LQ8IVG5 1584 aa32.84■■■□□ 2.85
LPCAT3-204ENST00000536797 ZMYM4Q5VZL5 1548 aa32.82■■■□□ 2.84
LPCAT3-204ENST00000536797 ZNF518AQ6AHZ1 1483 aa32.81■■■□□ 2.84
LPCAT3-204ENST00000536797 PLEKHH2Q8IVE3 1493 aa32.78■■■□□ 2.84
LPCAT3-204ENST00000536797 ARHGEF12Q9NZN5 1544 aa32.77■■■□□ 2.84
LPCAT3-204ENST00000536797 SYCP2Q9BX26 1530 aa32.75■■■□□ 2.83
LPCAT3-204ENST00000536797 MAGI2Q86UL8 1455 aa32.75■■■□□ 2.83
LPCAT3-204ENST00000536797 KDM5CP41229 1560 aa32.74■■■□□ 2.83
LPCAT3-204ENST00000536797 ARHGEF40Q8TER5 1519 aa32.74■■■□□ 2.83
LPCAT3-204ENST00000536797 AFAP1Q8N556 730 aa32.73■■■□□ 2.83
LPCAT3-204ENST00000536797 KIAA1107Q9UPP5 1409 aa32.73■■■□□ 2.83
LPCAT3-204ENST00000536797 TRAPPC8Q9Y2L5 1435 aa32.73■■■□□ 2.83
LPCAT3-204ENST00000536797 ZFYVE16Q7Z3T8 1539 aa32.72■■■□□ 2.83
LPCAT3-204ENST00000536797 MYOM3Q5VTT5 1437 aa32.69■■■□□ 2.82
LPCAT3-204ENST00000536797 HNRNPMP52272 730 aaKnown RBP eCLIP32.68■■■□□ 2.82
LPCAT3-204ENST00000536797 ZNF644Q9H582 1327 aaPredicted RBP32.68■■■□□ 2.82
LPCAT3-204ENST00000536797 HECW2Q9P2P5 1572 aa32.67■■■□□ 2.82
LPCAT3-204ENST00000536797 YEATS2Q9ULM3 1422 aa32.66■■■□□ 2.82
LPCAT3-204ENST00000536797 CAMSAP2Q08AD1 1489 aa32.66■■■□□ 2.82
LPCAT3-204ENST00000536797 MYT1LQ9UL68 1186 aa32.64■■■□□ 2.82
LPCAT3-204ENST00000536797 MIA2Q96PC5 1412 aa32.63■■■□□ 2.81
LPCAT3-204ENST00000536797 MLH3Q9UHC1 1453 aa32.63■■■□□ 2.81
LPCAT3-204ENST00000536797 MBD5Q9P267 1494 aa32.59■■■□□ 2.81
LPCAT3-204ENST00000536797 ATP10AO60312 1499 aa32.56■■■□□ 2.8
LPCAT3-204ENST00000536797 SPAG9O60271 1321 aaKnown RBP32.55■■■□□ 2.8
LPCAT3-204ENST00000536797 KIDINS220Q9ULH0 1771 aa32.55■■■□□ 2.8
LPCAT3-204ENST00000536797 DIP2CQ9Y2E4 1556 aa32.54■■■□□ 2.8
LPCAT3-204ENST00000536797 ABCA6Q8N139 1617 aa32.53■■■□□ 2.8
LPCAT3-204ENST00000536797 C9orf84Q5VXU9 1444 aa32.53■■■□□ 2.8
LPCAT3-204ENST00000536797 CCDC141Q6ZP82 1450 aa32.52■■■□□ 2.8
LPCAT3-204ENST00000536797 ARID4BQ4LE39 1312 aaPredicted RBP32.52■■■□□ 2.8
LPCAT3-204ENST00000536797 KDM4FA0A1W2PPD8 638 aa32.51■■■□□ 2.8
LPCAT3-204ENST00000536797 RSPH4AQ5TD94 716 aa32.51■■■□□ 2.8
LPCAT3-204ENST00000536797 ARHGEF5Q12774 1597 aa32.51■■■□□ 2.8
LPCAT3-204ENST00000536797 FGD6Q6ZV73 1430 aa32.51■■■□□ 2.79
LPCAT3-204ENST00000536797 INO80Q9ULG1 1556 aaPredicted RBP32.51■■■□□ 2.79
LPCAT3-204ENST00000536797 PTPN23Q9H3S7 1636 aa32.5■■■□□ 2.79
LPCAT3-204ENST00000536797 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
LPCAT3-204ENST00000536797 SIGLEC1Q9BZZ2 1709 aa32.46■■■□□ 2.79
LPCAT3-204ENST00000536797 PPARGC1BQ86YN6 1023 aaKnown RBP32.45■■■□□ 2.79
LPCAT3-204ENST00000536797 REREQ9P2R6 1566 aa32.45■■■□□ 2.79
LPCAT3-204ENST00000536797 BCORL1Q5H9F3 1711 aa32.44■■■□□ 2.78
LPCAT3-204ENST00000536797 TCOF1Q13428 1488 aaKnown RBP32.43■■■□□ 2.78
LPCAT3-204ENST00000536797 RTEL1-TNFRSF6BF6WH68 1400 aa32.42■■■□□ 2.78
LPCAT3-204ENST00000536797 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
LPCAT3-204ENST00000536797 TSPY4P0CV99 314 aa32.4■■■□□ 2.78
LPCAT3-204ENST00000536797 TSPY10P0CW01 314 aa32.4■■■□□ 2.78
LPCAT3-204ENST00000536797 ADAMTSL3P82987 1691 aa32.37■■■□□ 2.77
LPCAT3-204ENST00000536797 ADGBQ8N7X0 1667 aa32.36■■■□□ 2.77
LPCAT3-204ENST00000536797 MAST1Q9Y2H9 1570 aa32.34■■■□□ 2.77
LPCAT3-204ENST00000536797 AGLP35573 1532 aa32.33■■■□□ 2.77
LPCAT3-204ENST00000536797 DNMT1P26358 1616 aaKnown RBP32.32■■■□□ 2.76
LPCAT3-204ENST00000536797 A2MP01023 1474 aa32.32■■■□□ 2.76
LPCAT3-204ENST00000536797 CROCC2H7BZ55 1655 aa32.31■■■□□ 2.76
LPCAT3-204ENST00000536797 MLECQ14165 292 aa32.31■■■□□ 2.76
LPCAT3-204ENST00000536797 MADDQ8WXG6 1647 aa32.29■■■□□ 2.76
LPCAT3-204ENST00000536797 FAM50AQ14320 339 aaKnown RBP32.29■■■□□ 2.76
LPCAT3-204ENST00000536797 PLXNC1O60486 1568 aa32.29■■■□□ 2.76
LPCAT3-204ENST00000536797 ABCC5O15440 1437 aa32.29■■■□□ 2.76
LPCAT3-204ENST00000536797 DAPK1P53355 1430 aa32.29■■■□□ 2.76
LPCAT3-204ENST00000536797 SHANK2Q9UPX8 1470 aa32.27■■■□□ 2.76
LPCAT3-204ENST00000536797 FER1L4A9Z1Z3 1794 aa32.24■■■□□ 2.75
LPCAT3-204ENST00000536797 DHX29Q7Z478 1369 aaKnown RBP32.22■■■□□ 2.75
LPCAT3-204ENST00000536797 RIMS1Q86UR5 1692 aaKnown RBP32.22■■■□□ 2.75
LPCAT3-204ENST00000536797 PTPRMP28827 1452 aa32.17■■■□□ 2.74
LPCAT3-204ENST00000536797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.13■■■□□ 2.73
LPCAT3-204ENST00000536797 CHIC2Q9UKJ5 165 aa32.12■■■□□ 2.73
LPCAT3-204ENST00000536797 RRBP1Q9P2E9 1410 aaKnown RBP32.11■■■□□ 2.73
LPCAT3-204ENST00000536797 DUOX2Q9NRD8 1548 aa32.11■■■□□ 2.73
LPCAT3-204ENST00000536797 ESF1Q9H501 851 aaKnown RBP32.1■■■□□ 2.73
LPCAT3-204ENST00000536797 ANKRD30AQ9BXX3 1397 aa32.1■■■□□ 2.73
LPCAT3-204ENST00000536797 KIF15Q9NS87 1388 aa32.1■■■□□ 2.73
LPCAT3-204ENST00000536797 KIF3BO15066 747 aa32.08■■■□□ 2.73
LPCAT3-204ENST00000536797 GGT6Q6P531 493 aa32.08■■■□□ 2.73
LPCAT3-204ENST00000536797 RRP7BPQ9NSQ0 103 aa32.08■■■□□ 2.73
LPCAT3-204ENST00000536797 ADGRL2O95490 1459 aa32.07■■■□□ 2.72
LPCAT3-204ENST00000536797 EIF2AK4Q9P2K8 1649 aaKnown RBP32.06■■■□□ 2.72
LPCAT3-204ENST00000536797 NCOA1Q15788 1441 aa32.05■■■□□ 2.72
LPCAT3-204ENST00000536797 CNTLNQ9NXG0 1405 aa32.04■■■□□ 2.72
LPCAT3-204ENST00000536797 PTPRKQ15262 1439 aa32.01■■■□□ 2.72
LPCAT3-204ENST00000536797 ERBINQ96RT1 1412 aa32.01■■■□□ 2.72
LPCAT3-204ENST00000536797 ITGAEP38570 1179 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms