RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.76
TNFRSF1B-204ENST00000536782 KIF14Q15058 1648 aa32.26■■■□□ 2.75
TNFRSF1B-204ENST00000536782 SCAPERQ9BY12 1400 aa32.25■■■□□ 2.75
TNFRSF1B-204ENST00000536782 MAGI2Q86UL8 1455 aa32.23■■■□□ 2.75
TNFRSF1B-204ENST00000536782 EFCAB2Q5VUJ9 269 aa32.22■■■□□ 2.75
TNFRSF1B-204ENST00000536782 PCF11O94913 1555 aaKnown RBP32.21■■■□□ 2.75
TNFRSF1B-204ENST00000536782 TROQ12816 1431 aaPredicted RBP32.21■■■□□ 2.75
TNFRSF1B-204ENST00000536782 POGZQ7Z3K3 1410 aa32.21■■■□□ 2.75
TNFRSF1B-204ENST00000536782 LMTK3Q96Q04 1460 aa32.2■■■□□ 2.75
TNFRSF1B-204ENST00000536782 CLIP1P30622 1438 aa32.18■■■□□ 2.74
TNFRSF1B-204ENST00000536782 FER1L4A9Z1Z3 1794 aa32.12■■■□□ 2.73
TNFRSF1B-204ENST00000536782 CASKIN1Q8WXD9 1431 aa32.11■■■□□ 2.73
TNFRSF1B-204ENST00000536782 ARHGAP5Q13017 1502 aa32.1■■■□□ 2.73
TNFRSF1B-204ENST00000536782 CDC42BPBQ9Y5S2 1711 aa32.09■■■□□ 2.73
TNFRSF1B-204ENST00000536782 CCDC18Q5T9S5 1454 aa32.08■■■□□ 2.73
TNFRSF1B-204ENST00000536782 ATP10AO60312 1499 aa32.05■■■□□ 2.72
TNFRSF1B-204ENST00000536782 ZNF518AQ6AHZ1 1483 aa32.04■■■□□ 2.72
TNFRSF1B-204ENST00000536782 KDM5CP41229 1560 aa32.03■■■□□ 2.72
TNFRSF1B-204ENST00000536782 MLECQ14165 292 aa32.03■■■□□ 2.72
TNFRSF1B-204ENST00000536782 ARHGEF12Q9NZN5 1544 aa32.03■■■□□ 2.72
TNFRSF1B-204ENST00000536782 C9orf84Q5VXU9 1444 aa32.01■■■□□ 2.72
TNFRSF1B-204ENST00000536782 AFAP1Q8N556 730 aa32■■■□□ 2.71
TNFRSF1B-204ENST00000536782 PLPPR3Q6T4P5 718 aa31.99■■■□□ 2.71
TNFRSF1B-204ENST00000536782 FYCO1Q9BQS8 1478 aa31.97■■■□□ 2.71
TNFRSF1B-204ENST00000536782 PREX2Q70Z35 1606 aa31.97■■■□□ 2.71
TNFRSF1B-204ENST00000536782 HSPA2P54652 639 aa31.96■■■□□ 2.71
TNFRSF1B-204ENST00000536782 MYT1LQ9UL68 1186 aa31.95■■■□□ 2.71
TNFRSF1B-204ENST00000536782 DIP2CQ9Y2E4 1556 aa31.94■■■□□ 2.7
TNFRSF1B-204ENST00000536782 FBXO41Q8TF61 875 aa31.93■■■□□ 2.7
TNFRSF1B-204ENST00000536782 CDC42BPAQ5VT25 1732 aa31.92■■■□□ 2.7
TNFRSF1B-204ENST00000536782 ABCA6Q8N139 1617 aa31.91■■■□□ 2.7
TNFRSF1B-204ENST00000536782 ITSN2Q9NZM3 1697 aa31.9■■■□□ 2.7
TNFRSF1B-204ENST00000536782 ABCC1P33527 1531 aa31.9■■■□□ 2.7
TNFRSF1B-204ENST00000536782 REREQ9P2R6 1566 aa31.88■■■□□ 2.69
TNFRSF1B-204ENST00000536782 MLH3Q9UHC1 1453 aa31.86■■■□□ 2.69
TNFRSF1B-204ENST00000536782 TRAPPC8Q9Y2L5 1435 aa31.86■■■□□ 2.69
TNFRSF1B-204ENST00000536782 PREX1Q8TCU6 1659 aa31.86■■■□□ 2.69
TNFRSF1B-204ENST00000536782 KIDINS220Q9ULH0 1771 aa31.81■■■□□ 2.68
TNFRSF1B-204ENST00000536782 SETD1BQ9UPS6 1966 aaKnown RBP31.81■■■□□ 2.68
TNFRSF1B-204ENST00000536782 CEBPAP49715 358 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF1B-204ENST00000536782 ZNF777Q9ULD5 760 aaPredicted RBP31.78■■■□□ 2.68
TNFRSF1B-204ENST00000536782 AGLP35573 1532 aa31.75■■■□□ 2.67
TNFRSF1B-204ENST00000536782 C3P01024 1663 aa31.75■■■□□ 2.67
TNFRSF1B-204ENST00000536782 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
TNFRSF1B-204ENST00000536782 SAMD9LQ8IVG5 1584 aa31.74■■■□□ 2.67
TNFRSF1B-204ENST00000536782 STRCQ7RTU9 1775 aa31.73■■■□□ 2.67
TNFRSF1B-204ENST00000536782 MTUS2Q5JR59 1369 aa31.69■■■□□ 2.66
TNFRSF1B-204ENST00000536782 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
TNFRSF1B-204ENST00000536782 CCNB3Q8WWL7 1395 aa31.68■■■□□ 2.66
TNFRSF1B-204ENST00000536782 SYCP2Q9BX26 1530 aa31.67■■■□□ 2.66
TNFRSF1B-204ENST00000536782 ESF1Q9H501 851 aaKnown RBP31.67■■■□□ 2.66
TNFRSF1B-204ENST00000536782 HNRNPMP52272 730 aaKnown RBP eCLIP31.66■■■□□ 2.66
TNFRSF1B-204ENST00000536782 SPAG9O60271 1321 aaKnown RBP31.64■■■□□ 2.66
TNFRSF1B-204ENST00000536782 KIAA1107Q9UPP5 1409 aa31.63■■■□□ 2.65
TNFRSF1B-204ENST00000536782 PLEKHH2Q8IVE3 1493 aa31.63■■■□□ 2.65
TNFRSF1B-204ENST00000536782 CEP162Q5TB80 1403 aa31.61■■■□□ 2.65
TNFRSF1B-204ENST00000536782 UHRF1BP1Q6BDS2 1440 aa31.6■■■□□ 2.65
TNFRSF1B-204ENST00000536782 CERKQ8TCT0 537 aa31.59■■■□□ 2.65
TNFRSF1B-204ENST00000536782 SUPT6HQ7KZ85 1726 aaKnown RBP31.57■■■□□ 2.64
TNFRSF1B-204ENST00000536782 INO80Q9ULG1 1556 aaPredicted RBP31.56■■■□□ 2.64
TNFRSF1B-204ENST00000536782 CNTLNQ9NXG0 1405 aa31.56■■■□□ 2.64
TNFRSF1B-204ENST00000536782 EHBP1L1Q8N3D4 1523 aa31.55■■■□□ 2.64
TNFRSF1B-204ENST00000536782 ATP7AQ04656 1500 aa31.54■■■□□ 2.64
TNFRSF1B-204ENST00000536782 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
TNFRSF1B-204ENST00000536782 PLXNC1O60486 1568 aa31.51■■■□□ 2.64
TNFRSF1B-204ENST00000536782 TIAM1Q13009 1591 aa31.5■■■□□ 2.63
TNFRSF1B-204ENST00000536782 DMRT2Q9Y5R5 561 aa31.49■■■□□ 2.63
TNFRSF1B-204ENST00000536782 ZNF644Q9H582 1327 aaPredicted RBP31.48■■■□□ 2.63
TNFRSF1B-204ENST00000536782 A2MP01023 1474 aa31.46■■■□□ 2.63
TNFRSF1B-204ENST00000536782 CLTCQ00610 1675 aaKnown RBP31.44■■■□□ 2.62
TNFRSF1B-204ENST00000536782 PTPRTO14522 1441 aa31.41■■■□□ 2.62
TNFRSF1B-204ENST00000536782 MBD5Q9P267 1494 aa31.41■■■□□ 2.62
TNFRSF1B-204ENST00000536782 ADGBQ8N7X0 1667 aa31.41■■■□□ 2.62
TNFRSF1B-204ENST00000536782 ZMYM3Q14202 1370 aa31.41■■■□□ 2.62
TNFRSF1B-204ENST00000536782 NPATQ14207 1427 aa31.41■■■□□ 2.62
TNFRSF1B-204ENST00000536782 NCOA1Q15788 1441 aa31.38■■■□□ 2.61
TNFRSF1B-204ENST00000536782 GGT6Q6P531 493 aa31.37■■■□□ 2.61
TNFRSF1B-204ENST00000536782 NCOA2Q15596 1464 aa31.37■■■□□ 2.61
TNFRSF1B-204ENST00000536782 RTEL1-TNFRSF6BF6WH68 1400 aa31.36■■■□□ 2.61
TNFRSF1B-204ENST00000536782 PPP6R1Q9UPN7 881 aa31.33■■■□□ 2.61
TNFRSF1B-204ENST00000536782 CAMSAP1Q5T5Y3 1602 aa31.33■■■□□ 2.61
TNFRSF1B-204ENST00000536782 LTBP4Q8N2S1 1624 aa31.33■■■□□ 2.61
TNFRSF1B-204ENST00000536782 LOC105371045A0A1W2PR82 267 aa31.32■■■□□ 2.6
TNFRSF1B-204ENST00000536782 ZNF142P52746 1687 aaPredicted RBP31.32■■■□□ 2.6
TNFRSF1B-204ENST00000536782 MYO3AQ8NEV4 1616 aa31.31■■■□□ 2.6
TNFRSF1B-204ENST00000536782 PTPRKQ15262 1439 aa31.3■■■□□ 2.6
TNFRSF1B-204ENST00000536782 RSPH4AQ5TD94 716 aa31.29■■■□□ 2.6
TNFRSF1B-204ENST00000536782 VPS8Q8N3P4 1428 aa31.29■■■□□ 2.6
TNFRSF1B-204ENST00000536782 CAMSAP2Q08AD1 1489 aa31.28■■■□□ 2.6
TNFRSF1B-204ENST00000536782 CCDC141Q6ZP82 1450 aa31.28■■■□□ 2.6
TNFRSF1B-204ENST00000536782 DHX29Q7Z478 1369 aaKnown RBP31.28■■■□□ 2.6
TNFRSF1B-204ENST00000536782 CEP170BQ9Y4F5 1589 aaPredicted RBP31.22■■■□□ 2.59
TNFRSF1B-204ENST00000536782 LRRC9Q6ZRR7 1453 aa31.22■■■□□ 2.59
TNFRSF1B-204ENST00000536782 KIF3BO15066 747 aa31.19■■■□□ 2.58
TNFRSF1B-204ENST00000536782 NCKAP5LQ9HCH0 1330 aa31.18■■■□□ 2.58
TNFRSF1B-204ENST00000536782 PLA2R1Q13018 1463 aa31.16■■■□□ 2.58
TNFRSF1B-204ENST00000536782 TSPY4P0CV99 314 aa31.16■■■□□ 2.58
TNFRSF1B-204ENST00000536782 TSPY10P0CW01 314 aa31.16■■■□□ 2.58
TNFRSF1B-204ENST00000536782 ARHGEF5Q12774 1597 aa31.16■■■□□ 2.58
TNFRSF1B-204ENST00000536782 TCOF1Q13428 1488 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms