RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
RFX4-205ENST00000536722 VPS8Q8N3P4 1428 aa18.27■□□□□ 0.52
RFX4-205ENST00000536722 PREX2Q70Z35 1606 aa18.26■□□□□ 0.51
RFX4-205ENST00000536722 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
RFX4-205ENST00000536722 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
RFX4-205ENST00000536722 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
RFX4-205ENST00000536722 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
RFX4-205ENST00000536722 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
RFX4-205ENST00000536722 ADGRL1O94910 1474 aa18.2■□□□□ 0.5
RFX4-205ENST00000536722 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
RFX4-205ENST00000536722 ZMYM4Q5VZL5 1548 aa18.18■□□□□ 0.5
RFX4-205ENST00000536722 GPATCH8Q9UKJ3 1502 aaKnown RBP18.18■□□□□ 0.5
RFX4-205ENST00000536722 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
RFX4-205ENST00000536722 POGZQ7Z3K3 1410 aa18.16■□□□□ 0.5
RFX4-205ENST00000536722 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
RFX4-205ENST00000536722 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
RFX4-205ENST00000536722 ABCC1P33527 1531 aa18.15■□□□□ 0.5
RFX4-205ENST00000536722 ARHGEF12Q9NZN5 1544 aa18.15■□□□□ 0.5
RFX4-205ENST00000536722 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
RFX4-205ENST00000536722 ARHGEF40Q8TER5 1519 aa18.14■□□□□ 0.49
RFX4-205ENST00000536722 SAMD9LQ8IVG5 1584 aa18.14■□□□□ 0.49
RFX4-205ENST00000536722 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
RFX4-205ENST00000536722 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
RFX4-205ENST00000536722 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
RFX4-205ENST00000536722 KDM5CP41229 1560 aa18.12■□□□□ 0.49
RFX4-205ENST00000536722 YEATS2Q9ULM3 1422 aa18.11■□□□□ 0.49
RFX4-205ENST00000536722 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
RFX4-205ENST00000536722 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
RFX4-205ENST00000536722 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
RFX4-205ENST00000536722 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
RFX4-205ENST00000536722 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.48
RFX4-205ENST00000536722 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
RFX4-205ENST00000536722 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
RFX4-205ENST00000536722 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
RFX4-205ENST00000536722 SYCP2Q9BX26 1530 aa18.07■□□□□ 0.48
RFX4-205ENST00000536722 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
RFX4-205ENST00000536722 AFAP1Q8N556 730 aa18.05■□□□□ 0.48
RFX4-205ENST00000536722 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
RFX4-205ENST00000536722 KIDINS220Q9ULH0 1771 aa18.03■□□□□ 0.48
RFX4-205ENST00000536722 BCORL1Q5H9F3 1711 aa18.03■□□□□ 0.48
RFX4-205ENST00000536722 ADAMTSL3P82987 1691 aa18.03■□□□□ 0.48
RFX4-205ENST00000536722 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
RFX4-205ENST00000536722 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
RFX4-205ENST00000536722 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.48
RFX4-205ENST00000536722 ZNF644Q9H582 1327 aaPredicted RBP18.01■□□□□ 0.47
RFX4-205ENST00000536722 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
RFX4-205ENST00000536722 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
RFX4-205ENST00000536722 ZNF777Q9ULD5 760 aaPredicted RBP18■□□□□ 0.47
RFX4-205ENST00000536722 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
RFX4-205ENST00000536722 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
RFX4-205ENST00000536722 ATP10AO60312 1499 aa17.98■□□□□ 0.47
RFX4-205ENST00000536722 PLEKHH2Q8IVE3 1493 aa17.98■□□□□ 0.47
RFX4-205ENST00000536722 INO80Q9ULG1 1556 aaPredicted RBP17.97■□□□□ 0.47
RFX4-205ENST00000536722 CAMSAP2Q08AD1 1489 aa17.96■□□□□ 0.47
RFX4-205ENST00000536722 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
RFX4-205ENST00000536722 REREQ9P2R6 1566 aa17.96■□□□□ 0.46
RFX4-205ENST00000536722 MADDQ8WXG6 1647 aa17.95■□□□□ 0.46
RFX4-205ENST00000536722 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
RFX4-205ENST00000536722 MYOM3Q5VTT5 1437 aa17.92■□□□□ 0.46
RFX4-205ENST00000536722 ARHGEF5Q12774 1597 aa17.9■□□□□ 0.46
RFX4-205ENST00000536722 RIMS1Q86UR5 1692 aaKnown RBP17.9■□□□□ 0.46
RFX4-205ENST00000536722 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
RFX4-205ENST00000536722 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
RFX4-205ENST00000536722 FER1L4A9Z1Z3 1794 aa17.88■□□□□ 0.45
RFX4-205ENST00000536722 MIA2Q96PC5 1412 aa17.88■□□□□ 0.45
RFX4-205ENST00000536722 PTPRMP28827 1452 aa17.88■□□□□ 0.45
RFX4-205ENST00000536722 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
RFX4-205ENST00000536722 AGLP35573 1532 aa17.88■□□□□ 0.45
RFX4-205ENST00000536722 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
RFX4-205ENST00000536722 APLP2Q06481 763 aa17.87■□□□□ 0.45
RFX4-205ENST00000536722 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
RFX4-205ENST00000536722 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
RFX4-205ENST00000536722 MYT1LQ9UL68 1186 aa17.84■□□□□ 0.45
RFX4-205ENST00000536722 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.45
RFX4-205ENST00000536722 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
RFX4-205ENST00000536722 MLECQ14165 292 aa17.82■□□□□ 0.44
RFX4-205ENST00000536722 MAST1Q9Y2H9 1570 aa17.82■□□□□ 0.44
RFX4-205ENST00000536722 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
RFX4-205ENST00000536722 A2MP01023 1474 aa17.81■□□□□ 0.44
RFX4-205ENST00000536722 CROCC2H7BZ55 1655 aa17.8■□□□□ 0.44
RFX4-205ENST00000536722 DNMT1P26358 1616 aaKnown RBP17.77■□□□□ 0.44
RFX4-205ENST00000536722 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
RFX4-205ENST00000536722 ABCC5O15440 1437 aa17.76■□□□□ 0.43
RFX4-205ENST00000536722 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
RFX4-205ENST00000536722 C3P01024 1663 aa17.74■□□□□ 0.43
RFX4-205ENST00000536722 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
RFX4-205ENST00000536722 DAPK1P53355 1430 aa17.72■□□□□ 0.43
RFX4-205ENST00000536722 PPARGC1BQ86YN6 1023 aaKnown RBP17.71■□□□□ 0.43
RFX4-205ENST00000536722 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
RFX4-205ENST00000536722 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
RFX4-205ENST00000536722 MSH5O43196 834 aa17.69■□□□□ 0.42
RFX4-205ENST00000536722 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
RFX4-205ENST00000536722 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
RFX4-205ENST00000536722 CEBPAP49715 358 aaPredicted RBP17.68■□□□□ 0.42
RFX4-205ENST00000536722 LMTK3Q96Q04 1460 aa17.68■□□□□ 0.42
RFX4-205ENST00000536722 RNF17Q9BXT8 1623 aaKnown RBP17.67■□□□□ 0.42
RFX4-205ENST00000536722 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
RFX4-205ENST00000536722 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
RFX4-205ENST00000536722 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
RFX4-205ENST00000536722 CNTLNQ9NXG0 1405 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms