RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
PRKDC-206ENST00000536429 POGZQ7Z3K3 1410 aa20.95■□□□□ 0.95
PRKDC-206ENST00000536429 RICTORQ6R327 1708 aa20.95■□□□□ 0.94
PRKDC-206ENST00000536429 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
PRKDC-206ENST00000536429 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
PRKDC-206ENST00000536429 CDC42BPBQ9Y5S2 1711 aa20.92■□□□□ 0.94
PRKDC-206ENST00000536429 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
PRKDC-206ENST00000536429 YEATS2Q9ULM3 1422 aa20.91■□□□□ 0.94
PRKDC-206ENST00000536429 ZMYM4Q5VZL5 1548 aa20.9■□□□□ 0.94
PRKDC-206ENST00000536429 ARHGEF12Q9NZN5 1544 aa20.9■□□□□ 0.94
PRKDC-206ENST00000536429 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
PRKDC-206ENST00000536429 CDC42BPAQ5VT25 1732 aa20.89■□□□□ 0.93
PRKDC-206ENST00000536429 TIAM1Q13009 1591 aa20.89■□□□□ 0.93
PRKDC-206ENST00000536429 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
PRKDC-206ENST00000536429 CCNB3Q8WWL7 1395 aa20.88■□□□□ 0.93
PRKDC-206ENST00000536429 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
PRKDC-206ENST00000536429 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
PRKDC-206ENST00000536429 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
PRKDC-206ENST00000536429 ABCC1P33527 1531 aa20.86■□□□□ 0.93
PRKDC-206ENST00000536429 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
PRKDC-206ENST00000536429 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
PRKDC-206ENST00000536429 ZNF518AQ6AHZ1 1483 aa20.84■□□□□ 0.93
PRKDC-206ENST00000536429 MAGI2Q86UL8 1455 aa20.84■□□□□ 0.93
PRKDC-206ENST00000536429 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
PRKDC-206ENST00000536429 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
PRKDC-206ENST00000536429 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
PRKDC-206ENST00000536429 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
PRKDC-206ENST00000536429 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
PRKDC-206ENST00000536429 KDM5CP41229 1560 aa20.81■□□□□ 0.92
PRKDC-206ENST00000536429 HNRNPMP52272 730 aaKnown RBP eCLIP20.81■□□□□ 0.92
PRKDC-206ENST00000536429 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
PRKDC-206ENST00000536429 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
PRKDC-206ENST00000536429 SIGLEC1Q9BZZ2 1709 aa20.78■□□□□ 0.92
PRKDC-206ENST00000536429 ITSN2Q9NZM3 1697 aa20.78■□□□□ 0.92
PRKDC-206ENST00000536429 ATP10AO60312 1499 aa20.76■□□□□ 0.91
PRKDC-206ENST00000536429 MYT1LQ9UL68 1186 aa20.76■□□□□ 0.91
PRKDC-206ENST00000536429 KIAA1107Q9UPP5 1409 aa20.76■□□□□ 0.91
PRKDC-206ENST00000536429 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
PRKDC-206ENST00000536429 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
PRKDC-206ENST00000536429 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
PRKDC-206ENST00000536429 C9orf84Q5VXU9 1444 aa20.73■□□□□ 0.91
PRKDC-206ENST00000536429 PLEKHH2Q8IVE3 1493 aa20.73■□□□□ 0.91
PRKDC-206ENST00000536429 ADAMTSL3P82987 1691 aa20.73■□□□□ 0.91
PRKDC-206ENST00000536429 MLECQ14165 292 aa20.72■□□□□ 0.91
PRKDC-206ENST00000536429 BCORL1Q5H9F3 1711 aa20.72■□□□□ 0.91
PRKDC-206ENST00000536429 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
PRKDC-206ENST00000536429 MBD5Q9P267 1494 aa20.7■□□□□ 0.9
PRKDC-206ENST00000536429 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
PRKDC-206ENST00000536429 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
PRKDC-206ENST00000536429 APLP2Q06481 763 aa20.69■□□□□ 0.9
PRKDC-206ENST00000536429 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
PRKDC-206ENST00000536429 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
PRKDC-206ENST00000536429 PTPRMP28827 1452 aa20.67■□□□□ 0.9
PRKDC-206ENST00000536429 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
PRKDC-206ENST00000536429 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
PRKDC-206ENST00000536429 MYOM3Q5VTT5 1437 aa20.62■□□□□ 0.89
PRKDC-206ENST00000536429 REREQ9P2R6 1566 aa20.62■□□□□ 0.89
PRKDC-206ENST00000536429 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
PRKDC-206ENST00000536429 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
PRKDC-206ENST00000536429 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
PRKDC-206ENST00000536429 RIMS1Q86UR5 1692 aaKnown RBP20.58■□□□□ 0.89
PRKDC-206ENST00000536429 MIA2Q96PC5 1412 aa20.58■□□□□ 0.88
PRKDC-206ENST00000536429 AGLP35573 1532 aa20.58■□□□□ 0.88
PRKDC-206ENST00000536429 RTEL1-TNFRSF6BF6WH68 1400 aa20.55■□□□□ 0.88
PRKDC-206ENST00000536429 A2MP01023 1474 aa20.55■□□□□ 0.88
PRKDC-206ENST00000536429 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
PRKDC-206ENST00000536429 PLXNC1O60486 1568 aa20.53■□□□□ 0.88
PRKDC-206ENST00000536429 ARHGEF5Q12774 1597 aa20.53■□□□□ 0.88
PRKDC-206ENST00000536429 CEBPAP49715 358 aaPredicted RBP20.52■□□□□ 0.88
PRKDC-206ENST00000536429 FER1L4A9Z1Z3 1794 aa20.51■□□□□ 0.87
PRKDC-206ENST00000536429 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
PRKDC-206ENST00000536429 TSPY4P0CV99 314 aa20.5■□□□□ 0.87
PRKDC-206ENST00000536429 TSPY10P0CW01 314 aa20.5■□□□□ 0.87
PRKDC-206ENST00000536429 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
PRKDC-206ENST00000536429 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
PRKDC-206ENST00000536429 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
PRKDC-206ENST00000536429 TCOF1Q13428 1488 aaKnown RBP20.46■□□□□ 0.87
PRKDC-206ENST00000536429 ABCC5O15440 1437 aa20.45■□□□□ 0.86
PRKDC-206ENST00000536429 GGT6Q6P531 493 aa20.45■□□□□ 0.86
PRKDC-206ENST00000536429 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
PRKDC-206ENST00000536429 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
PRKDC-206ENST00000536429 MAST1Q9Y2H9 1570 aa20.42■□□□□ 0.86
PRKDC-206ENST00000536429 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
PRKDC-206ENST00000536429 KIF3BO15066 747 aa20.41■□□□□ 0.86
PRKDC-206ENST00000536429 DAPK1P53355 1430 aa20.4■□□□□ 0.86
PRKDC-206ENST00000536429 CNTLNQ9NXG0 1405 aa20.39■□□□□ 0.85
PRKDC-206ENST00000536429 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
PRKDC-206ENST00000536429 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
PRKDC-206ENST00000536429 HSPA2P54652 639 aa20.37■□□□□ 0.85
PRKDC-206ENST00000536429 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
PRKDC-206ENST00000536429 SHANK2Q9UPX8 1470 aa20.37■□□□□ 0.85
PRKDC-206ENST00000536429 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
PRKDC-206ENST00000536429 C3P01024 1663 aa20.35■□□□□ 0.85
PRKDC-206ENST00000536429 DNMT1P26358 1616 aaKnown RBP20.35■□□□□ 0.85
PRKDC-206ENST00000536429 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
PRKDC-206ENST00000536429 CROCC2H7BZ55 1655 aa20.33■□□□□ 0.85
PRKDC-206ENST00000536429 CLTCQ00610 1675 aaKnown RBP20.32■□□□□ 0.84
PRKDC-206ENST00000536429 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
PRKDC-206ENST00000536429 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
PRKDC-206ENST00000536429 PTPRKQ15262 1439 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms