RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 DNAJC5Q9H3Z4 198 aa9.07□□□□□ -0.96
MDM2-223ENST00000536089 BOLA1Q9Y3E2 137 aa9.07□□□□□ -0.96
MDM2-223ENST00000536089 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
MDM2-223ENST00000536089 NKX1-1Q15270 411 aaPredicted RBP9.04□□□□□ -0.96
MDM2-223ENST00000536089 SPNS2Q8IVW8 549 aa9.03□□□□□ -0.96
MDM2-223ENST00000536089 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
MDM2-223ENST00000536089 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
MDM2-223ENST00000536089 GTPBP6O43824 516 aaPredicted RBP9.01□□□□□ -0.97
MDM2-223ENST00000536089 MMRN1Q13201 1228 aa9.01□□□□□ -0.97
MDM2-223ENST00000536089 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
MDM2-223ENST00000536089 ZNF710Q8N1W2 664 aa9□□□□□ -0.97
MDM2-223ENST00000536089 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
MDM2-223ENST00000536089 HS3ST6Q96QI5 342 aa8.98□□□□□ -0.97
MDM2-223ENST00000536089 FAM205CA6NFA0 338 aa8.97□□□□□ -0.97
MDM2-223ENST00000536089 SOX12O15370 315 aa8.97□□□□□ -0.97
MDM2-223ENST00000536089 NBR1Q14596 966 aa8.97□□□□□ -0.97
MDM2-223ENST00000536089 HOXB1P14653 301 aaPredicted RBP8.95□□□□□ -0.98
MDM2-223ENST00000536089 EFCAB3Q8N7B9 438 aa8.95□□□□□ -0.98
MDM2-223ENST00000536089 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
MDM2-223ENST00000536089 HOXB3P14651 431 aaPredicted RBP8.93□□□□□ -0.98
MDM2-223ENST00000536089 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
MDM2-223ENST00000536089 TPRNQ4KMQ1 711 aa8.91□□□□□ -0.98
MDM2-223ENST00000536089 ERBB3P21860 1342 aa8.9□□□□□ -0.98
MDM2-223ENST00000536089 MICALL2Q8IY33 904 aa8.88□□□□□ -0.99
MDM2-223ENST00000536089 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
MDM2-223ENST00000536089 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
MDM2-223ENST00000536089 POTEB3A0JP26 581 aa8.85□□□□□ -0.99
MDM2-223ENST00000536089 POTEBQ6S5H4 581 aa8.85□□□□□ -0.99
MDM2-223ENST00000536089 WDR70Q9NW82 654 aa8.85□□□□□ -0.99
MDM2-223ENST00000536089 NLRP6P59044 892 aa8.84□□□□□ -0.99
MDM2-223ENST00000536089 PTGER2P43116 358 aa8.8□□□□□ -1
MDM2-223ENST00000536089 MFRPQ9BY79 579 aa8.8□□□□□ -1
MDM2-223ENST00000536089 PHF8Q9UPP1 1060 aa8.8□□□□□ -1
MDM2-223ENST00000536089 VARS2Q5ST30 1063 aaKnown RBP8.79□□□□□ -1
MDM2-223ENST00000536089 P3H3Q8IVL6 736 aa8.79□□□□□ -1
MDM2-223ENST00000536089 ZNF687Q8N1G0 1237 aa8.79□□□□□ -1
MDM2-223ENST00000536089 MS4A4AQ96JQ5 239 aa8.78□□□□□ -1
MDM2-223ENST00000536089 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
MDM2-223ENST00000536089 TMEM92Q6UXU6 159 aa8.76□□□□□ -1.01
MDM2-223ENST00000536089 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
MDM2-223ENST00000536089 RNF166Q96A37 237 aaPredicted RBP8.75□□□□□ -1.01
MDM2-223ENST00000536089 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
MDM2-223ENST00000536089 FBXO22Q8NEZ5 403 aa8.72□□□□□ -1.01
MDM2-223ENST00000536089 PPP1R37O75864 691 aa8.71□□□□□ -1.02
MDM2-223ENST00000536089 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
MDM2-223ENST00000536089 ARSIQ5FYB1 569 aa8.69□□□□□ -1.02
MDM2-223ENST00000536089 PBX2P40425 430 aa8.68□□□□□ -1.02
MDM2-223ENST00000536089 KCNV2Q8TDN2 545 aa8.68□□□□□ -1.02
MDM2-223ENST00000536089 TULP1O00294 542 aaPredicted RBP8.65□□□□□ -1.02
MDM2-223ENST00000536089 SLC34A2O95436 690 aa8.65□□□□□ -1.02
MDM2-223ENST00000536089 TMC2Q8TDI7 906 aa8.65□□□□□ -1.02
MDM2-223ENST00000536089 KIF3CO14782 793 aa8.64□□□□□ -1.03
MDM2-223ENST00000536089 PSDA5PKW4 1024 aaPredicted RBP8.63□□□□□ -1.03
MDM2-223ENST00000536089 PDE4AP27815 886 aa8.63□□□□□ -1.03
MDM2-223ENST00000536089 E2F4Q16254 413 aa8.63□□□□□ -1.03
MDM2-223ENST00000536089 ANKRD13DQ6ZTN6 518 aa8.63□□□□□ -1.03
MDM2-223ENST00000536089 C2orf72A6NCS6 295 aa8.62□□□□□ -1.03
MDM2-223ENST00000536089 LSM11P83369 360 aaKnown RBP eCLIP8.62□□□□□ -1.03
MDM2-223ENST00000536089 LARP6Q9BRS8 491 aaKnown RBP8.62□□□□□ -1.03
MDM2-223ENST00000536089 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
MDM2-223ENST00000536089 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
MDM2-223ENST00000536089 NUDT7P0C024 238 aa8.57□□□□□ -1.04
MDM2-223ENST00000536089 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
MDM2-223ENST00000536089 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.042e-9■■■□□ 16.5
MDM2-223ENST00000536089 DDX27Q96GQ7 796 aaKnown RBP8.56□□□□□ -1.04
MDM2-223ENST00000536089 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
MDM2-223ENST00000536089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
MDM2-223ENST00000536089 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
MDM2-223ENST00000536089 TBC1D12O60347 775 aa8.53□□□□□ -1.04
MDM2-223ENST00000536089 ARHGAP33O14559 1287 aa8.51□□□□□ -1.05
MDM2-223ENST00000536089 SEMA3EO15041 775 aa8.51□□□□□ -1.05
MDM2-223ENST00000536089 MFSD10Q14728 455 aa8.51□□□□□ -1.05
MDM2-223ENST00000536089 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
MDM2-223ENST00000536089 HCSTQ9UBK5 93 aa8.51□□□□□ -1.05
MDM2-223ENST00000536089 SMYD5Q6GMV2 418 aa8.5□□□□□ -1.05
MDM2-223ENST00000536089 PTCD2Q8WV60 388 aaKnown RBP8.5□□□□□ -1.05
MDM2-223ENST00000536089 KCNH8Q96L42 1107 aa8.5□□□□□ -1.05
MDM2-223ENST00000536089 NISCHQ9Y2I1 1504 aa8.49□□□□□ -1.05
MDM2-223ENST00000536089 TK2O00142 265 aa8.49□□□□□ -1.05
MDM2-223ENST00000536089 FOXK1P85037 733 aa8.48□□□□□ -1.05
MDM2-223ENST00000536089 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
MDM2-223ENST00000536089 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
MDM2-223ENST00000536089 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
MDM2-223ENST00000536089 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
MDM2-223ENST00000536089 STAC3Q96MF2 364 aa8.46□□□□□ -1.06
MDM2-223ENST00000536089 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
MDM2-223ENST00000536089 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
MDM2-223ENST00000536089 PLPP6Q8IY26 295 aa8.44□□□□□ -1.06
MDM2-223ENST00000536089 CAMK2BQ13554 666 aa8.43□□□□□ -1.06
MDM2-223ENST00000536089 POTEEQ6S8J3 1075 aa8.43□□□□□ -1.06
MDM2-223ENST00000536089 KDM4FA0A1W2PPD8 638 aa8.42□□□□□ -1.06
MDM2-223ENST00000536089 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
MDM2-223ENST00000536089 PLA2G2EQ9NZK7 142 aa8.42□□□□□ -1.06
MDM2-223ENST00000536089 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
MDM2-223ENST00000536089 DSG2Q14126 1118 aa8.39□□□□□ -1.07
MDM2-223ENST00000536089 DPYSL4O14531 572 aa8.37□□□□□ -1.07
MDM2-223ENST00000536089 HRO43593 1189 aa8.37□□□□□ -1.07
MDM2-223ENST00000536089 SLC24A3Q9HC58 644 aa8.36□□□□□ -1.07
MDM2-223ENST00000536089 SPDYE16A6NNV3 312 aaPredicted RBP8.34□□□□□ -1.07
MDM2-223ENST00000536089 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms