RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CDC42BPBQ9Y5S2 1711 aa28.18■■■□□ 2.1
DDX55-204ENST00000536079 CDC42BPAQ5VT25 1732 aa28.17■■■□□ 2.1
DDX55-204ENST00000536079 PREX2Q70Z35 1606 aa28.16■■■□□ 2.1
DDX55-204ENST00000536079 FRMPD1Q5SYB0 1578 aa28.15■■■□□ 2.1
DDX55-204ENST00000536079 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
DDX55-204ENST00000536079 CCNB3Q8WWL7 1395 aa28.14■■■□□ 2.1
DDX55-204ENST00000536079 CFAP74Q9C0B2 1584 aa28.14■■■□□ 2.1
DDX55-204ENST00000536079 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
DDX55-204ENST00000536079 SCAPERQ9BY12 1400 aa28.12■■■□□ 2.09
DDX55-204ENST00000536079 DENND4BO75064 1496 aaPredicted RBP28.12■■■□□ 2.09
DDX55-204ENST00000536079 APLP2Q06481 763 aa28.1■■■□□ 2.09
DDX55-204ENST00000536079 ARHGEF12Q9NZN5 1544 aa28.08■■■□□ 2.09
DDX55-204ENST00000536079 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
DDX55-204ENST00000536079 SUPT6HQ7KZ85 1726 aaKnown RBP28.08■■■□□ 2.09
DDX55-204ENST00000536079 CFDP1Q9UEE9 299 aaPredicted RBP28.07■■■□□ 2.08
DDX55-204ENST00000536079 RICTORQ6R327 1708 aa28.05■■■□□ 2.08
DDX55-204ENST00000536079 ZNF644Q9H582 1327 aaPredicted RBP28.05■■■□□ 2.08
DDX55-204ENST00000536079 SAMD9LQ8IVG5 1584 aa28.04■■■□□ 2.08
DDX55-204ENST00000536079 POGZQ7Z3K3 1410 aa28.04■■■□□ 2.08
DDX55-204ENST00000536079 AFAP1Q8N556 730 aa28.03■■■□□ 2.08
DDX55-204ENST00000536079 ABCC1P33527 1531 aa28.02■■■□□ 2.08
DDX55-204ENST00000536079 TRAPPC8Q9Y2L5 1435 aa28.01■■■□□ 2.07
DDX55-204ENST00000536079 HNRNPMP52272 730 aaKnown RBP eCLIP27.99■■■□□ 2.07
DDX55-204ENST00000536079 ZMYM4Q5VZL5 1548 aa27.95■■■□□ 2.06
DDX55-204ENST00000536079 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.06
DDX55-204ENST00000536079 ITSN2Q9NZM3 1697 aa27.94■■■□□ 2.06
DDX55-204ENST00000536079 YEATS2Q9ULM3 1422 aa27.94■■■□□ 2.06
DDX55-204ENST00000536079 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
DDX55-204ENST00000536079 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
DDX55-204ENST00000536079 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
DDX55-204ENST00000536079 MYOM3Q5VTT5 1437 aa27.91■■■□□ 2.06
DDX55-204ENST00000536079 KDM5CP41229 1560 aa27.9■■■□□ 2.06
DDX55-204ENST00000536079 MBD5Q9P267 1494 aa27.89■■■□□ 2.05
DDX55-204ENST00000536079 CAMSAP2Q08AD1 1489 aa27.88■■■□□ 2.05
DDX55-204ENST00000536079 PLEKHH2Q8IVE3 1493 aa27.87■■■□□ 2.05
DDX55-204ENST00000536079 ZFYVE16Q7Z3T8 1539 aa27.87■■■□□ 2.05
DDX55-204ENST00000536079 ARHGEF40Q8TER5 1519 aa27.87■■■□□ 2.05
DDX55-204ENST00000536079 MAGI2Q86UL8 1455 aa27.85■■■□□ 2.05
DDX55-204ENST00000536079 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
DDX55-204ENST00000536079 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
DDX55-204ENST00000536079 MLH3Q9UHC1 1453 aa27.82■■■□□ 2.04
DDX55-204ENST00000536079 SIGLEC1Q9BZZ2 1709 aa27.79■■■□□ 2.04
DDX55-204ENST00000536079 HECW2Q9P2P5 1572 aa27.79■■■□□ 2.04
DDX55-204ENST00000536079 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
DDX55-204ENST00000536079 SPAG9O60271 1321 aaKnown RBP27.78■■■□□ 2.04
DDX55-204ENST00000536079 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
DDX55-204ENST00000536079 KIDINS220Q9ULH0 1771 aa27.76■■■□□ 2.03
DDX55-204ENST00000536079 ATP10AO60312 1499 aa27.76■■■□□ 2.03
DDX55-204ENST00000536079 ABCA6Q8N139 1617 aa27.75■■■□□ 2.03
DDX55-204ENST00000536079 DIP2CQ9Y2E4 1556 aa27.75■■■□□ 2.03
DDX55-204ENST00000536079 PTPN23Q9H3S7 1636 aa27.73■■■□□ 2.03
DDX55-204ENST00000536079 CCDC141Q6ZP82 1450 aa27.72■■■□□ 2.03
DDX55-204ENST00000536079 ARID4BQ4LE39 1312 aaPredicted RBP27.71■■■□□ 2.03
DDX55-204ENST00000536079 C9orf84Q5VXU9 1444 aa27.71■■■□□ 2.03
DDX55-204ENST00000536079 TCOF1Q13428 1488 aaKnown RBP27.7■■■□□ 2.03
DDX55-204ENST00000536079 ARHGEF5Q12774 1597 aa27.7■■■□□ 2.03
DDX55-204ENST00000536079 INO80Q9ULG1 1556 aaPredicted RBP27.7■■■□□ 2.03
DDX55-204ENST00000536079 ATP7AQ04656 1500 aa27.7■■■□□ 2.02
DDX55-204ENST00000536079 RSPH4AQ5TD94 716 aa27.67■■■□□ 2.02
DDX55-204ENST00000536079 ABCC5O15440 1437 aa27.65■■■□□ 2.02
DDX55-204ENST00000536079 RTEL1-TNFRSF6BF6WH68 1400 aa27.63■■■□□ 2.01
DDX55-204ENST00000536079 MLECQ14165 292 aa27.62■■■□□ 2.01
DDX55-204ENST00000536079 BCORL1Q5H9F3 1711 aa27.61■■■□□ 2.01
DDX55-204ENST00000536079 TSPY4P0CV99 314 aa27.61■■■□□ 2.01
DDX55-204ENST00000536079 TSPY10P0CW01 314 aa27.61■■■□□ 2.01
DDX55-204ENST00000536079 FAM50AQ14320 339 aaKnown RBP27.61■■■□□ 2.01
DDX55-204ENST00000536079 REREQ9P2R6 1566 aa27.6■■■□□ 2.01
DDX55-204ENST00000536079 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
DDX55-204ENST00000536079 DAPK1P53355 1430 aa27.58■■■□□ 2
DDX55-204ENST00000536079 A2MP01023 1474 aa27.57■■■□□ 2
DDX55-204ENST00000536079 AGLP35573 1532 aa27.55■■■□□ 2
DDX55-204ENST00000536079 MAST1Q9Y2H9 1570 aa27.55■■■□□ 2
DDX55-204ENST00000536079 DNMT1P26358 1616 aaKnown RBP27.55■■■□□ 2
DDX55-204ENST00000536079 PLXNC1O60486 1568 aa27.53■■■□□ 2
DDX55-204ENST00000536079 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
DDX55-204ENST00000536079 ADGBQ8N7X0 1667 aa27.52■■■□□ 2
DDX55-204ENST00000536079 MADDQ8WXG6 1647 aa27.52■■■□□ 2
DDX55-204ENST00000536079 DHX29Q7Z478 1369 aaKnown RBP27.51■■□□□ 1.99
DDX55-204ENST00000536079 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
DDX55-204ENST00000536079 CROCC2H7BZ55 1655 aa27.5■■□□□ 1.99
DDX55-204ENST00000536079 SHANK2Q9UPX8 1470 aa27.5■■□□□ 1.99
DDX55-204ENST00000536079 PTPRKQ15262 1439 aa27.5■■□□□ 1.99
DDX55-204ENST00000536079 RRP7BPQ9NSQ0 103 aa27.46■■□□□ 1.99
DDX55-204ENST00000536079 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
DDX55-204ENST00000536079 PTPRMP28827 1452 aa27.44■■□□□ 1.98
DDX55-204ENST00000536079 RIMS1Q86UR5 1692 aaKnown RBP27.42■■□□□ 1.98
DDX55-204ENST00000536079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.41■■□□□ 1.98
DDX55-204ENST00000536079 KIF15Q9NS87 1388 aa27.41■■□□□ 1.98
DDX55-204ENST00000536079 ITGAEP38570 1179 aa27.41■■□□□ 1.98
DDX55-204ENST00000536079 KIF3BO15066 747 aa27.4■■□□□ 1.98
DDX55-204ENST00000536079 GGT6Q6P531 493 aa27.4■■□□□ 1.98
DDX55-204ENST00000536079 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
DDX55-204ENST00000536079 FER1L4A9Z1Z3 1794 aa27.38■■□□□ 1.97
DDX55-204ENST00000536079 PLPPR3Q6T4P5 718 aa27.37■■□□□ 1.97
DDX55-204ENST00000536079 ADGRL2O95490 1459 aa27.37■■□□□ 1.97
DDX55-204ENST00000536079 ANKRD30AQ9BXX3 1397 aa27.36■■□□□ 1.97
DDX55-204ENST00000536079 CEBPAP49715 358 aaPredicted RBP27.35■■□□□ 1.97
DDX55-204ENST00000536079 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
DDX55-204ENST00000536079 ERBINQ96RT1 1412 aa27.27■■□□□ 1.96
DDX55-204ENST00000536079 ROCK1Q13464 1354 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms