RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MS4A4AQ96JQ5 239 aa7.23□□□□□ -1.25
SNHG1-202ENST00000535689 E2F4Q16254 413 aa7.22□□□□□ -1.25
SNHG1-202ENST00000535689 ILDR1Q86SU0 546 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-202ENST00000535689 SMYD5Q6GMV2 418 aa7.2□□□□□ -1.26
SNHG1-202ENST00000535689 ARHGEF1Q92888 912 aaKnown RBP7.2□□□□□ -1.26
SNHG1-202ENST00000535689 SCUBE2Q9NQ36 999 aa7.2□□□□□ -1.26
SNHG1-202ENST00000535689 TMC2Q8TDI7 906 aa7.19□□□□□ -1.26
SNHG1-202ENST00000535689 DDX27Q96GQ7 796 aaKnown RBP7.19□□□□□ -1.26
SNHG1-202ENST00000535689 PPP1R37O75864 691 aa7.18□□□□□ -1.26
SNHG1-202ENST00000535689 LARP6Q9BRS8 491 aaKnown RBP7.18□□□□□ -1.26
SNHG1-202ENST00000535689 SLAIN1Q8ND83 568 aa7.17□□□□□ -1.26
SNHG1-202ENST00000535689 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
SNHG1-202ENST00000535689 BOLA1Q9Y3E2 137 aa7.17□□□□□ -1.26
SNHG1-202ENST00000535689 POTEMA6NI47 508 aa7.15□□□□□ -1.26
SNHG1-202ENST00000535689 MFSD10Q14728 455 aa7.15□□□□□ -1.26
SNHG1-202ENST00000535689 GPHNQ9NQX3 736 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-202ENST00000535689 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
SNHG1-202ENST00000535689 C3orf67Q6ZVT6 689 aa7.13□□□□□ -1.27
SNHG1-202ENST00000535689 MICALL2Q8IY33 904 aa7.13□□□□□ -1.27
SNHG1-202ENST00000535689 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.13□□□□□ -1.27
SNHG1-202ENST00000535689 POTEGQ6S5H5 508 aa7.12□□□□□ -1.27
SNHG1-202ENST00000535689 CADPS2Q86UW7 1296 aa7.12□□□□□ -1.27
SNHG1-202ENST00000535689 ARIH1Q9Y4X5 557 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-202ENST00000535689 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-202ENST00000535689 PPP1R15BQ5SWA1 713 aa7.11□□□□□ -1.27
SNHG1-202ENST00000535689 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-202ENST00000535689 TMEM92Q6UXU6 159 aa7.11□□□□□ -1.27
SNHG1-202ENST00000535689 SPDYE16A6NNV3 312 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-202ENST00000535689 TMEM121BQ9BXQ6 578 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-202ENST00000535689 TBC1D12O60347 775 aa7.09□□□□□ -1.27
SNHG1-202ENST00000535689 FOXK1P85037 733 aa7.09□□□□□ -1.27
SNHG1-202ENST00000535689 KCNV2Q8TDN2 545 aa7.09□□□□□ -1.27
SNHG1-202ENST00000535689 FAM163AQ96GL9 167 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-202ENST00000535689 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
SNHG1-202ENST00000535689 CAMK2BQ13554 666 aa7.07□□□□□ -1.28
SNHG1-202ENST00000535689 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
SNHG1-202ENST00000535689 TPRNQ4KMQ1 711 aa7.05□□□□□ -1.28
SNHG1-202ENST00000535689 MAP3K9P80192 1104 aa7.04□□□□□ -1.28
SNHG1-202ENST00000535689 PLPP6Q8IY26 295 aa7.03□□□□□ -1.28
SNHG1-202ENST00000535689 ST18O60284 1047 aa7.02□□□□□ -1.29
SNHG1-202ENST00000535689 C2orf72A6NCS6 295 aa7.01□□□□□ -1.29
SNHG1-202ENST00000535689 DSG2Q14126 1118 aa7□□□□□ -1.29
SNHG1-202ENST00000535689 TESPA1A2RU30 521 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-202ENST00000535689 KIF3CO14782 793 aa6.99□□□□□ -1.29
SNHG1-202ENST00000535689 RIMBP2O15034 1052 aa6.99□□□□□ -1.29
SNHG1-202ENST00000535689 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-202ENST00000535689 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
SNHG1-202ENST00000535689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.99□□□□□ -1.29
SNHG1-202ENST00000535689 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-202ENST00000535689 MARVELD3Q96A59 401 aa6.98□□□□□ -1.29
SNHG1-202ENST00000535689 PDIA6Q15084 440 aa6.97□□□□□ -1.29
SNHG1-202ENST00000535689 SLC34A2O95436 690 aa6.96□□□□□ -1.3
SNHG1-202ENST00000535689 SEMA3EO15041 775 aa6.95□□□□□ -1.3
SNHG1-202ENST00000535689 SNPHO15079 494 aa6.95□□□□□ -1.3
SNHG1-202ENST00000535689 NISCHQ9Y2I1 1504 aa6.95□□□□□ -1.3
SNHG1-202ENST00000535689 DPYSL4O14531 572 aa6.94□□□□□ -1.3
SNHG1-202ENST00000535689 KHSRPQ92945 711 aaKnown RBP eCLIP6.94□□□□□ -1.31e-12■■■□□ 18.3
SNHG1-202ENST00000535689 DOK7Q18PE1 504 aa6.93□□□□□ -1.3
SNHG1-202ENST00000535689 PTCD2Q8WV60 388 aaKnown RBP6.93□□□□□ -1.3
SNHG1-202ENST00000535689 OXER1Q8TDS5 423 aa6.92□□□□□ -1.3
SNHG1-202ENST00000535689 POTEB3A0JP26 581 aa6.91□□□□□ -1.3
SNHG1-202ENST00000535689 PTGER2P43116 358 aa6.91□□□□□ -1.3
SNHG1-202ENST00000535689 POTEBQ6S5H4 581 aa6.91□□□□□ -1.3
SNHG1-202ENST00000535689 ZSWIM6Q9HCJ5 1215 aa6.91□□□□□ -1.3
SNHG1-202ENST00000535689 EMILIN3Q9NT22 766 aa6.91□□□□□ -1.3
SNHG1-202ENST00000535689 GPIHBP1Q8IV16 184 aa6.9□□□□□ -1.3
SNHG1-202ENST00000535689 CDAN1Q8IWY9 1227 aa6.9□□□□□ -1.3
SNHG1-202ENST00000535689 ZNF710Q8N1W2 664 aa6.9□□□□□ -1.3
SNHG1-202ENST00000535689 UPF1Q92900 1129 aaKnown RBP eCLIP6.9□□□□□ -1.3
SNHG1-202ENST00000535689 EPAS1Q99814 870 aa6.9□□□□□ -1.3
SNHG1-202ENST00000535689 PSDA5PKW4 1024 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-202ENST00000535689 EMP3P54852 163 aa6.89□□□□□ -1.31
SNHG1-202ENST00000535689 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
SNHG1-202ENST00000535689 FAM205CA6NFA0 338 aa6.88□□□□□ -1.31
SNHG1-202ENST00000535689 EVI5O60447 810 aa6.88□□□□□ -1.31
SNHG1-202ENST00000535689 PRKCSHP14314 528 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-202ENST00000535689 GPR153Q6NV75 609 aa6.88□□□□□ -1.31
SNHG1-202ENST00000535689 GRXCR2A6NFK2 248 aa6.87□□□□□ -1.31
SNHG1-202ENST00000535689 HOXB1P14653 301 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-202ENST00000535689 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
SNHG1-202ENST00000535689 PHF14O94880 888 aa6.86□□□□□ -1.31
SNHG1-202ENST00000535689 ZC3H15Q8WU90 426 aaKnown RBP6.86□□□□□ -1.31
SNHG1-202ENST00000535689 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
SNHG1-202ENST00000535689 NUDT7P0C024 238 aa6.85□□□□□ -1.31
SNHG1-202ENST00000535689 CERKQ8TCT0 537 aa6.85□□□□□ -1.31
SNHG1-202ENST00000535689 HS3ST6Q96QI5 342 aa6.85□□□□□ -1.31
SNHG1-202ENST00000535689 ANO8Q9HCE9 1232 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-202ENST00000535689 FCHSD2O94868 740 aa6.84□□□□□ -1.31
SNHG1-202ENST00000535689 PCDHGA4Q9Y5G9 962 aa6.84□□□□□ -1.31
SNHG1-202ENST00000535689 NUTM2FA1L443 756 aa6.83□□□□□ -1.32
SNHG1-202ENST00000535689 KCNH8Q96L42 1107 aa6.83□□□□□ -1.32
SNHG1-202ENST00000535689 ZMYND10O75800 440 aa6.82□□□□□ -1.32
SNHG1-202ENST00000535689 HIC1Q14526 733 aa6.82□□□□□ -1.32
SNHG1-202ENST00000535689 TYW1BQ6NUM6 668 aa6.82□□□□□ -1.32
SNHG1-202ENST00000535689 BARGINQ6ZT62 677 aa6.82□□□□□ -1.32
SNHG1-202ENST00000535689 AK7Q96M32 723 aa6.82□□□□□ -1.32
SNHG1-202ENST00000535689 ERBB3P21860 1342 aa6.81□□□□□ -1.32
SNHG1-202ENST00000535689 MLLT3P42568 568 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-202ENST00000535689 VARS2Q5ST30 1063 aaKnown RBP6.81□□□□□ -1.32
SNHG1-202ENST00000535689 ERICH6Q7L0X2 663 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms