RNA–Protein interactions for RNA: ENST00000535678.1

ACSL3-209, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-209ENST00000535678 POGZQ7Z3K3 1410 aa32.53■■■□□ 2.8
ACSL3-209ENST00000535678 TROQ12816 1431 aaPredicted RBP32.51■■■□□ 2.8
ACSL3-209ENST00000535678 KIF14Q15058 1648 aa32.49■■■□□ 2.79
ACSL3-209ENST00000535678 MYO5CQ9NQX4 1742 aa32.48■■■□□ 2.79
ACSL3-209ENST00000535678 RIMS1Q86UR5 1692 aaKnown RBP32.47■■■□□ 2.79
ACSL3-209ENST00000535678 MLECQ14165 292 aa32.47■■■□□ 2.79
ACSL3-209ENST00000535678 SIGLEC1Q9BZZ2 1709 aa32.46■■■□□ 2.79
ACSL3-209ENST00000535678 CLIP1P30622 1438 aa32.46■■■□□ 2.79
ACSL3-209ENST00000535678 PLPPR3Q6T4P5 718 aa32.45■■■□□ 2.79
ACSL3-209ENST00000535678 PCF11O94913 1555 aaKnown RBP32.43■■■□□ 2.78
ACSL3-209ENST00000535678 LRRIQ1Q96JM4 1722 aa32.43■■■□□ 2.78
ACSL3-209ENST00000535678 ATP10AO60312 1499 aa32.42■■■□□ 2.78
ACSL3-209ENST00000535678 LMTK3Q96Q04 1460 aa32.42■■■□□ 2.78
ACSL3-209ENST00000535678 AFAP1Q8N556 730 aa32.4■■■□□ 2.78
ACSL3-209ENST00000535678 ARHGAP5Q13017 1502 aa32.4■■■□□ 2.78
ACSL3-209ENST00000535678 CASKIN1Q8WXD9 1431 aa32.39■■■□□ 2.78
ACSL3-209ENST00000535678 ZNF518AQ6AHZ1 1483 aa32.35■■■□□ 2.77
ACSL3-209ENST00000535678 C9orf84Q5VXU9 1444 aa32.34■■■□□ 2.77
ACSL3-209ENST00000535678 CCDC18Q5T9S5 1454 aa32.32■■■□□ 2.76
ACSL3-209ENST00000535678 HSPA2P54652 639 aa32.32■■■□□ 2.76
ACSL3-209ENST00000535678 MYT1LQ9UL68 1186 aa32.31■■■□□ 2.76
ACSL3-209ENST00000535678 KDM5CP41229 1560 aa32.28■■■□□ 2.76
ACSL3-209ENST00000535678 ARHGEF12Q9NZN5 1544 aa32.27■■■□□ 2.76
ACSL3-209ENST00000535678 CDC42BPBQ9Y5S2 1711 aa32.27■■■□□ 2.76
ACSL3-209ENST00000535678 FER1L4A9Z1Z3 1794 aa32.27■■■□□ 2.76
ACSL3-209ENST00000535678 FBXO41Q8TF61 875 aa32.25■■■□□ 2.75
ACSL3-209ENST00000535678 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
ACSL3-209ENST00000535678 CEBPAP49715 358 aaPredicted RBP32.21■■■□□ 2.75
ACSL3-209ENST00000535678 TRAPPC8Q9Y2L5 1435 aa32.2■■■□□ 2.75
ACSL3-209ENST00000535678 PREX2Q70Z35 1606 aa32.2■■■□□ 2.75
ACSL3-209ENST00000535678 MLH3Q9UHC1 1453 aa32.2■■■□□ 2.75
ACSL3-209ENST00000535678 DIP2CQ9Y2E4 1556 aa32.17■■■□□ 2.74
ACSL3-209ENST00000535678 ABCC1P33527 1531 aa32.16■■■□□ 2.74
ACSL3-209ENST00000535678 ZNF777Q9ULD5 760 aaPredicted RBP32.13■■■□□ 2.73
ACSL3-209ENST00000535678 CDC42BPAQ5VT25 1732 aa32.12■■■□□ 2.73
ACSL3-209ENST00000535678 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
ACSL3-209ENST00000535678 ABCA6Q8N139 1617 aa32.11■■■□□ 2.73
ACSL3-209ENST00000535678 ITSN2Q9NZM3 1697 aa32.09■■■□□ 2.73
ACSL3-209ENST00000535678 GPATCH8Q9UKJ3 1502 aaKnown RBP32.07■■■□□ 2.72
ACSL3-209ENST00000535678 AGLP35573 1532 aa32.05■■■□□ 2.72
ACSL3-209ENST00000535678 HNRNPMP52272 730 aaKnown RBP eCLIP32.03■■■□□ 2.722e-7■■■■■ 27.1
ACSL3-209ENST00000535678 ESF1Q9H501 851 aaKnown RBP32.03■■■□□ 2.72
ACSL3-209ENST00000535678 PREX1Q8TCU6 1659 aa32.02■■■□□ 2.72
ACSL3-209ENST00000535678 KIDINS220Q9ULH0 1771 aa32.02■■■□□ 2.72
ACSL3-209ENST00000535678 CFDP1Q9UEE9 299 aaPredicted RBP32.01■■■□□ 2.71
ACSL3-209ENST00000535678 SAMD9LQ8IVG5 1584 aa32■■■□□ 2.71
ACSL3-209ENST00000535678 SPAG9O60271 1321 aaKnown RBP31.98■■■□□ 2.71
ACSL3-209ENST00000535678 CCNB3Q8WWL7 1395 aa31.97■■■□□ 2.71
ACSL3-209ENST00000535678 MTUS2Q5JR59 1369 aa31.96■■■□□ 2.71
ACSL3-209ENST00000535678 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
ACSL3-209ENST00000535678 UHRF1BP1Q6BDS2 1440 aa31.96■■■□□ 2.71
ACSL3-209ENST00000535678 KIAA1107Q9UPP5 1409 aa31.93■■■□□ 2.7
ACSL3-209ENST00000535678 CERKQ8TCT0 537 aa31.93■■■□□ 2.7
ACSL3-209ENST00000535678 SETD1BQ9UPS6 1966 aaKnown RBP31.93■■■□□ 2.7
ACSL3-209ENST00000535678 DMRT2Q9Y5R5 561 aa31.91■■■□□ 2.7
ACSL3-209ENST00000535678 C3P01024 1663 aa31.91■■■□□ 2.7
ACSL3-209ENST00000535678 PLEKHH2Q8IVE3 1493 aa31.9■■■□□ 2.7
ACSL3-209ENST00000535678 CNTLNQ9NXG0 1405 aa31.88■■■□□ 2.69
ACSL3-209ENST00000535678 STRCQ7RTU9 1775 aa31.84■■■□□ 2.69
ACSL3-209ENST00000535678 ZNF644Q9H582 1327 aaPredicted RBP31.84■■■□□ 2.69
ACSL3-209ENST00000535678 ATP7AQ04656 1500 aa31.84■■■□□ 2.69
ACSL3-209ENST00000535678 CEP162Q5TB80 1403 aa31.83■■■□□ 2.69
ACSL3-209ENST00000535678 ZMYM3Q14202 1370 aa31.81■■■□□ 2.68
ACSL3-209ENST00000535678 A2MP01023 1474 aa31.79■■■□□ 2.68
ACSL3-209ENST00000535678 SUPT6HQ7KZ85 1726 aaKnown RBP31.79■■■□□ 2.68
ACSL3-209ENST00000535678 INO80Q9ULG1 1556 aaPredicted RBP31.78■■■□□ 2.68
ACSL3-209ENST00000535678 TIAM1Q13009 1591 aa31.77■■■□□ 2.68
ACSL3-209ENST00000535678 EHBP1L1Q8N3D4 1523 aa31.77■■■□□ 2.68
ACSL3-209ENST00000535678 GGT6Q6P531 493 aa31.75■■■□□ 2.67
ACSL3-209ENST00000535678 PLXNC1O60486 1568 aa31.74■■■□□ 2.67
ACSL3-209ENST00000535678 MBD5Q9P267 1494 aa31.74■■■□□ 2.67
ACSL3-209ENST00000535678 NPATQ14207 1427 aa31.74■■■□□ 2.67
ACSL3-209ENST00000535678 MROH2AA6NES4 1674 aa31.72■■■□□ 2.67
ACSL3-209ENST00000535678 PTPRTO14522 1441 aa31.71■■■□□ 2.67
ACSL3-209ENST00000535678 PPP6R1Q9UPN7 881 aa31.67■■■□□ 2.66
ACSL3-209ENST00000535678 RTEL1-TNFRSF6BF6WH68 1400 aa31.66■■■□□ 2.66
ACSL3-209ENST00000535678 NCOA1Q15788 1441 aa31.66■■■□□ 2.66
ACSL3-209ENST00000535678 CLTCQ00610 1675 aaKnown RBP31.65■■■□□ 2.66
ACSL3-209ENST00000535678 ADGBQ8N7X0 1667 aa31.64■■■□□ 2.65
ACSL3-209ENST00000535678 NCOA2Q15596 1464 aa31.63■■■□□ 2.65
ACSL3-209ENST00000535678 LOC105371045A0A1W2PR82 267 aa31.62■■■□□ 2.65
ACSL3-209ENST00000535678 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
ACSL3-209ENST00000535678 DHX29Q7Z478 1369 aaKnown RBP31.61■■■□□ 2.65
ACSL3-209ENST00000535678 RSPH4AQ5TD94 716 aa31.6■■■□□ 2.65
ACSL3-209ENST00000535678 CAMSAP1Q5T5Y3 1602 aa31.59■■■□□ 2.65
ACSL3-209ENST00000535678 NCKAP5LQ9HCH0 1330 aa31.56■■■□□ 2.64
ACSL3-209ENST00000535678 CAMSAP2Q08AD1 1489 aa31.55■■■□□ 2.64
ACSL3-209ENST00000535678 CCDC141Q6ZP82 1450 aa31.55■■■□□ 2.64
ACSL3-209ENST00000535678 KIF3BO15066 747 aa31.54■■■□□ 2.64
ACSL3-209ENST00000535678 LTBP4Q8N2S1 1624 aa31.51■■■□□ 2.63
ACSL3-209ENST00000535678 VPS8Q8N3P4 1428 aa31.5■■■□□ 2.63
ACSL3-209ENST00000535678 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
ACSL3-209ENST00000535678 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
ACSL3-209ENST00000535678 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
ACSL3-209ENST00000535678 PKD2Q13563 968 aa31.48■■■□□ 2.63
ACSL3-209ENST00000535678 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
ACSL3-209ENST00000535678 CEP170BQ9Y4F5 1589 aaPredicted RBP31.47■■■□□ 2.63
ACSL3-209ENST00000535678 ZNF142P52746 1687 aaPredicted RBP31.46■■■□□ 2.63
ACSL3-209ENST00000535678 PLA2R1Q13018 1463 aa31.45■■■□□ 2.62
ACSL3-209ENST00000535678 FBXO31Q5XUX0 539 aaPredicted RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms