RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ARHGAP5Q13017 1502 aa23.97■■□□□ 1.43
CNN1-202ENST00000535659 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
CNN1-202ENST00000535659 PPRC1Q5VV67 1664 aaKnown RBP23.97■■□□□ 1.43
CNN1-202ENST00000535659 CDC42BPBQ9Y5S2 1711 aa23.96■■□□□ 1.43
CNN1-202ENST00000535659 ARAP3Q8WWN8 1544 aa23.96■■□□□ 1.43
CNN1-202ENST00000535659 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.43
CNN1-202ENST00000535659 FANCAO15360 1455 aa23.94■■□□□ 1.42
CNN1-202ENST00000535659 TEX14Q8IWB6 1497 aa23.94■■□□□ 1.42
CNN1-202ENST00000535659 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
CNN1-202ENST00000535659 CFAP74Q9C0B2 1584 aa23.9■■□□□ 1.42
CNN1-202ENST00000535659 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
CNN1-202ENST00000535659 NEO1Q92859 1461 aa23.89■■□□□ 1.42
CNN1-202ENST00000535659 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.41
CNN1-202ENST00000535659 AKNAQ7Z591 1439 aa23.89■■□□□ 1.41
CNN1-202ENST00000535659 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
CNN1-202ENST00000535659 PTPN23Q9H3S7 1636 aa23.83■■□□□ 1.41
CNN1-202ENST00000535659 HNRNPMP52272 730 aaKnown RBP eCLIP23.83■■□□□ 1.41
CNN1-202ENST00000535659 CAMSAP2Q08AD1 1489 aa23.83■■□□□ 1.4
CNN1-202ENST00000535659 ADGRL1O94910 1474 aa23.82■■□□□ 1.4
CNN1-202ENST00000535659 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
CNN1-202ENST00000535659 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
CNN1-202ENST00000535659 ABCC1P33527 1531 aa23.81■■□□□ 1.4
CNN1-202ENST00000535659 PLEKHH2Q8IVE3 1493 aa23.81■■□□□ 1.4
CNN1-202ENST00000535659 KIAA1107Q9UPP5 1409 aa23.8■■□□□ 1.4
CNN1-202ENST00000535659 TCOF1Q13428 1488 aaKnown RBP23.8■■□□□ 1.4
CNN1-202ENST00000535659 RRBP1Q9P2E9 1410 aaKnown RBP23.79■■□□□ 1.4
CNN1-202ENST00000535659 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
CNN1-202ENST00000535659 SYCP2Q9BX26 1530 aa23.77■■□□□ 1.4
CNN1-202ENST00000535659 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
CNN1-202ENST00000535659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.39
CNN1-202ENST00000535659 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
CNN1-202ENST00000535659 AFAP1Q8N556 730 aa23.74■■□□□ 1.39
CNN1-202ENST00000535659 DENND4BO75064 1496 aaPredicted RBP23.74■■□□□ 1.39
CNN1-202ENST00000535659 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
CNN1-202ENST00000535659 COL17A1Q9UMD9 1497 aaPredicted RBP23.74■■□□□ 1.39
CNN1-202ENST00000535659 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
CNN1-202ENST00000535659 POGZQ7Z3K3 1410 aa23.71■■□□□ 1.39
CNN1-202ENST00000535659 KDM6BO15054 1643 aa23.7■■□□□ 1.38
CNN1-202ENST00000535659 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
CNN1-202ENST00000535659 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
CNN1-202ENST00000535659 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
CNN1-202ENST00000535659 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
CNN1-202ENST00000535659 CCDC141Q6ZP82 1450 aa23.67■■□□□ 1.38
CNN1-202ENST00000535659 RICTORQ6R327 1708 aa23.67■■□□□ 1.38
CNN1-202ENST00000535659 FRMPD1Q5SYB0 1578 aa23.66■■□□□ 1.38
CNN1-202ENST00000535659 ABCC5O15440 1437 aa23.66■■□□□ 1.38
CNN1-202ENST00000535659 ITGAEP38570 1179 aa23.65■■□□□ 1.38
CNN1-202ENST00000535659 DNMT1P26358 1616 aaKnown RBP23.65■■□□□ 1.38
CNN1-202ENST00000535659 DAPK1P53355 1430 aa23.65■■□□□ 1.38
CNN1-202ENST00000535659 SPAG9O60271 1321 aaKnown RBP23.64■■□□□ 1.37
CNN1-202ENST00000535659 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
CNN1-202ENST00000535659 KDM5CP41229 1560 aa23.62■■□□□ 1.37
CNN1-202ENST00000535659 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
CNN1-202ENST00000535659 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
CNN1-202ENST00000535659 KDM4FA0A1W2PPD8 638 aa23.59■■□□□ 1.37
CNN1-202ENST00000535659 CROCC2H7BZ55 1655 aa23.59■■□□□ 1.37
CNN1-202ENST00000535659 ZMYM4Q5VZL5 1548 aa23.58■■□□□ 1.37
CNN1-202ENST00000535659 PTPRKQ15262 1439 aa23.58■■□□□ 1.37
CNN1-202ENST00000535659 MLH3Q9UHC1 1453 aa23.57■■□□□ 1.36
CNN1-202ENST00000535659 RTEL1-TNFRSF6BF6WH68 1400 aa23.57■■□□□ 1.36
CNN1-202ENST00000535659 C9orf84Q5VXU9 1444 aa23.57■■□□□ 1.36
CNN1-202ENST00000535659 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
CNN1-202ENST00000535659 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
CNN1-202ENST00000535659 MAST1Q9Y2H9 1570 aa23.55■■□□□ 1.36
CNN1-202ENST00000535659 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
CNN1-202ENST00000535659 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
CNN1-202ENST00000535659 INO80Q9ULG1 1556 aaPredicted RBP23.54■■□□□ 1.36
CNN1-202ENST00000535659 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
CNN1-202ENST00000535659 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
CNN1-202ENST00000535659 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
CNN1-202ENST00000535659 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
CNN1-202ENST00000535659 RRP7BPQ9NSQ0 103 aa23.5■■□□□ 1.35
CNN1-202ENST00000535659 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
CNN1-202ENST00000535659 ROCK1Q13464 1354 aa23.48■■□□□ 1.35
CNN1-202ENST00000535659 ADGRL2O95490 1459 aa23.48■■□□□ 1.35
CNN1-202ENST00000535659 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
CNN1-202ENST00000535659 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
CNN1-202ENST00000535659 ARHGEF40Q8TER5 1519 aa23.46■■□□□ 1.35
CNN1-202ENST00000535659 PLXNC1O60486 1568 aa23.45■■□□□ 1.34
CNN1-202ENST00000535659 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
CNN1-202ENST00000535659 ATP10AO60312 1499 aa23.44■■□□□ 1.34
CNN1-202ENST00000535659 KIF15Q9NS87 1388 aa23.43■■□□□ 1.34
CNN1-202ENST00000535659 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
CNN1-202ENST00000535659 A2MP01023 1474 aa23.39■■□□□ 1.33
CNN1-202ENST00000535659 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
CNN1-202ENST00000535659 PCGF6Q9BYE7 350 aa23.37■■□□□ 1.33
CNN1-202ENST00000535659 NAIPQ13075 1403 aa23.35■■□□□ 1.33
CNN1-202ENST00000535659 REREQ9P2R6 1566 aa23.35■■□□□ 1.33
CNN1-202ENST00000535659 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
CNN1-202ENST00000535659 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
CNN1-202ENST00000535659 KIF3BO15066 747 aa23.32■■□□□ 1.32
CNN1-202ENST00000535659 ERBINQ96RT1 1412 aa23.32■■□□□ 1.32
CNN1-202ENST00000535659 ARID4BQ4LE39 1312 aaPredicted RBP23.31■■□□□ 1.32
CNN1-202ENST00000535659 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
CNN1-202ENST00000535659 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
CNN1-202ENST00000535659 SETD5Q9C0A6 1442 aa23.3■■□□□ 1.32
CNN1-202ENST00000535659 ILDR1Q86SU0 546 aaPredicted RBP23.28■■□□□ 1.32
CNN1-202ENST00000535659 AGLP35573 1532 aa23.28■■□□□ 1.32
CNN1-202ENST00000535659 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
CNN1-202ENST00000535659 GGT6Q6P531 493 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms