RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
NPIPB3-207ENST00000535190 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
NPIPB3-207ENST00000535190 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
NPIPB3-207ENST00000535190 POGZQ7Z3K3 1410 aa13.04□□□□□ -0.32
NPIPB3-207ENST00000535190 FOXD1Q16676 465 aa13.02□□□□□ -0.33
NPIPB3-207ENST00000535190 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
NPIPB3-207ENST00000535190 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
NPIPB3-207ENST00000535190 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
NPIPB3-207ENST00000535190 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
NPIPB3-207ENST00000535190 CLIP1P30622 1438 aa13.01□□□□□ -0.33
NPIPB3-207ENST00000535190 CDC42BPBQ9Y5S2 1711 aa13□□□□□ -0.33
NPIPB3-207ENST00000535190 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
NPIPB3-207ENST00000535190 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
NPIPB3-207ENST00000535190 MADDQ8WXG6 1647 aa12.99□□□□□ -0.33
NPIPB3-207ENST00000535190 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
NPIPB3-207ENST00000535190 ATP10AO60312 1499 aa12.98□□□□□ -0.33
NPIPB3-207ENST00000535190 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
NPIPB3-207ENST00000535190 KDM5CP41229 1560 aa12.96□□□□□ -0.33
NPIPB3-207ENST00000535190 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
NPIPB3-207ENST00000535190 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
NPIPB3-207ENST00000535190 ZNF518AQ6AHZ1 1483 aa12.95□□□□□ -0.34
NPIPB3-207ENST00000535190 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
NPIPB3-207ENST00000535190 PREX2Q70Z35 1606 aa12.94□□□□□ -0.34
NPIPB3-207ENST00000535190 C9orf84Q5VXU9 1444 aa12.94□□□□□ -0.34
NPIPB3-207ENST00000535190 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
NPIPB3-207ENST00000535190 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
NPIPB3-207ENST00000535190 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
NPIPB3-207ENST00000535190 MLECQ14165 292 aa12.93□□□□□ -0.34
NPIPB3-207ENST00000535190 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
NPIPB3-207ENST00000535190 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
NPIPB3-207ENST00000535190 ABCC1P33527 1531 aa12.92□□□□□ -0.34
NPIPB3-207ENST00000535190 REREQ9P2R6 1566 aa12.9□□□□□ -0.35
NPIPB3-207ENST00000535190 DIP2CQ9Y2E4 1556 aa12.9□□□□□ -0.35
NPIPB3-207ENST00000535190 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
NPIPB3-207ENST00000535190 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
NPIPB3-207ENST00000535190 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
NPIPB3-207ENST00000535190 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
NPIPB3-207ENST00000535190 HNRNPMP52272 730 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPIPB3-207ENST00000535190 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
NPIPB3-207ENST00000535190 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
NPIPB3-207ENST00000535190 KIAA1107Q9UPP5 1409 aa12.88□□□□□ -0.35
NPIPB3-207ENST00000535190 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
NPIPB3-207ENST00000535190 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
NPIPB3-207ENST00000535190 AGLP35573 1532 aa12.87□□□□□ -0.35
NPIPB3-207ENST00000535190 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
NPIPB3-207ENST00000535190 HSPA2P54652 639 aa12.85□□□□□ -0.35
NPIPB3-207ENST00000535190 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
NPIPB3-207ENST00000535190 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
NPIPB3-207ENST00000535190 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
NPIPB3-207ENST00000535190 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
NPIPB3-207ENST00000535190 ZNF644Q9H582 1327 aaPredicted RBP12.84□□□□□ -0.35
NPIPB3-207ENST00000535190 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
NPIPB3-207ENST00000535190 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
NPIPB3-207ENST00000535190 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
NPIPB3-207ENST00000535190 MBD5Q9P267 1494 aa12.82□□□□□ -0.36
NPIPB3-207ENST00000535190 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
NPIPB3-207ENST00000535190 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
NPIPB3-207ENST00000535190 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
NPIPB3-207ENST00000535190 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
NPIPB3-207ENST00000535190 C3P01024 1663 aa12.77□□□□□ -0.36
NPIPB3-207ENST00000535190 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
NPIPB3-207ENST00000535190 INO80Q9ULG1 1556 aaPredicted RBP12.77□□□□□ -0.37
NPIPB3-207ENST00000535190 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
NPIPB3-207ENST00000535190 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
NPIPB3-207ENST00000535190 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
NPIPB3-207ENST00000535190 PREX1Q8TCU6 1659 aa12.76□□□□□ -0.37
NPIPB3-207ENST00000535190 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
NPIPB3-207ENST00000535190 A2MP01023 1474 aa12.75□□□□□ -0.37
NPIPB3-207ENST00000535190 ZMYM3Q14202 1370 aa12.75□□□□□ -0.37
NPIPB3-207ENST00000535190 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
NPIPB3-207ENST00000535190 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
NPIPB3-207ENST00000535190 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
NPIPB3-207ENST00000535190 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
NPIPB3-207ENST00000535190 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
NPIPB3-207ENST00000535190 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
NPIPB3-207ENST00000535190 LRRC9Q6ZRR7 1453 aa12.72□□□□□ -0.37
NPIPB3-207ENST00000535190 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
NPIPB3-207ENST00000535190 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
NPIPB3-207ENST00000535190 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
NPIPB3-207ENST00000535190 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.37
NPIPB3-207ENST00000535190 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
NPIPB3-207ENST00000535190 GGT6Q6P531 493 aa12.7□□□□□ -0.38
NPIPB3-207ENST00000535190 MROH2AA6NES4 1674 aa12.7□□□□□ -0.38
NPIPB3-207ENST00000535190 NPATQ14207 1427 aa12.7□□□□□ -0.38
NPIPB3-207ENST00000535190 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
NPIPB3-207ENST00000535190 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
NPIPB3-207ENST00000535190 CCDC141Q6ZP82 1450 aa12.68□□□□□ -0.38
NPIPB3-207ENST00000535190 CERKQ8TCT0 537 aa12.68□□□□□ -0.38
NPIPB3-207ENST00000535190 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
NPIPB3-207ENST00000535190 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
NPIPB3-207ENST00000535190 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
NPIPB3-207ENST00000535190 PTPRTO14522 1441 aa12.66□□□□□ -0.38
NPIPB3-207ENST00000535190 CLTCQ00610 1675 aaKnown RBP12.66□□□□□ -0.38
NPIPB3-207ENST00000535190 KIF3BO15066 747 aa12.65□□□□□ -0.38
NPIPB3-207ENST00000535190 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
NPIPB3-207ENST00000535190 TSPY4P0CV99 314 aa12.64□□□□□ -0.39
NPIPB3-207ENST00000535190 TSPY10P0CW01 314 aa12.64□□□□□ -0.39
NPIPB3-207ENST00000535190 MIA2Q96PC5 1412 aa12.63□□□□□ -0.39
NPIPB3-207ENST00000535190 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
NPIPB3-207ENST00000535190 MAST1Q9Y2H9 1570 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms