RNA–Protein interactions for RNA: ENST00000535112.1

LDHB-207, Transcript of lactate dehydrogenase B, humanhuman

TSL 5

Gene LDHB, Length 252 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-207ENST00000535112 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
LDHB-207ENST00000535112 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
LDHB-207ENST00000535112 ZMYM4Q5VZL5 1548 aa16.28■□□□□ 0.2
LDHB-207ENST00000535112 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
LDHB-207ENST00000535112 ABCC1P33527 1531 aa16.27■□□□□ 0.2
LDHB-207ENST00000535112 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
LDHB-207ENST00000535112 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
LDHB-207ENST00000535112 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
LDHB-207ENST00000535112 SIGLEC1Q9BZZ2 1709 aa16.25■□□□□ 0.19
LDHB-207ENST00000535112 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
LDHB-207ENST00000535112 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
LDHB-207ENST00000535112 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
LDHB-207ENST00000535112 KDM5CP41229 1560 aa16.22■□□□□ 0.19
LDHB-207ENST00000535112 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
LDHB-207ENST00000535112 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
LDHB-207ENST00000535112 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
LDHB-207ENST00000535112 ZFYVE16Q7Z3T8 1539 aa16.2■□□□□ 0.18
LDHB-207ENST00000535112 SYCP2Q9BX26 1530 aa16.2■□□□□ 0.18
LDHB-207ENST00000535112 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
LDHB-207ENST00000535112 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
LDHB-207ENST00000535112 NCOA2Q15596 1464 aa16.19■□□□□ 0.18
LDHB-207ENST00000535112 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
LDHB-207ENST00000535112 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
LDHB-207ENST00000535112 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
LDHB-207ENST00000535112 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
LDHB-207ENST00000535112 KIDINS220Q9ULH0 1771 aa16.16■□□□□ 0.18
LDHB-207ENST00000535112 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
LDHB-207ENST00000535112 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
LDHB-207ENST00000535112 DIP2CQ9Y2E4 1556 aa16.15■□□□□ 0.18
LDHB-207ENST00000535112 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
LDHB-207ENST00000535112 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
LDHB-207ENST00000535112 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
LDHB-207ENST00000535112 ADAMTSL3P82987 1691 aa16.13■□□□□ 0.17
LDHB-207ENST00000535112 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
LDHB-207ENST00000535112 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
LDHB-207ENST00000535112 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
LDHB-207ENST00000535112 MADDQ8WXG6 1647 aa16.1■□□□□ 0.17
LDHB-207ENST00000535112 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
LDHB-207ENST00000535112 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.17
LDHB-207ENST00000535112 ZNF777Q9ULD5 760 aaPredicted RBP16.08■□□□□ 0.16
LDHB-207ENST00000535112 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
LDHB-207ENST00000535112 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
LDHB-207ENST00000535112 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.16
LDHB-207ENST00000535112 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
LDHB-207ENST00000535112 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
LDHB-207ENST00000535112 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
LDHB-207ENST00000535112 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
LDHB-207ENST00000535112 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
LDHB-207ENST00000535112 KIAA1107Q9UPP5 1409 aa16.06■□□□□ 0.16
LDHB-207ENST00000535112 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
LDHB-207ENST00000535112 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
LDHB-207ENST00000535112 ATP10AO60312 1499 aa16.04■□□□□ 0.16
LDHB-207ENST00000535112 MBD5Q9P267 1494 aa16.04■□□□□ 0.16
LDHB-207ENST00000535112 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
LDHB-207ENST00000535112 ZNF644Q9H582 1327 aaPredicted RBP16.04■□□□□ 0.16
LDHB-207ENST00000535112 PTPN23Q9H3S7 1636 aa16.03■□□□□ 0.16
LDHB-207ENST00000535112 AEBP2Q6ZN18 517 aaPredicted RBP16.02■□□□□ 0.16
LDHB-207ENST00000535112 PLXNC1O60486 1568 aa16.01■□□□□ 0.15
LDHB-207ENST00000535112 HNRNPMP52272 730 aaKnown RBP eCLIP16.01■□□□□ 0.15
LDHB-207ENST00000535112 CCDC141Q6ZP82 1450 aa16.01■□□□□ 0.15
LDHB-207ENST00000535112 APLP2Q06481 763 aa16■□□□□ 0.15
LDHB-207ENST00000535112 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
LDHB-207ENST00000535112 AGLP35573 1532 aa15.98■□□□□ 0.15
LDHB-207ENST00000535112 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
LDHB-207ENST00000535112 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
LDHB-207ENST00000535112 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
LDHB-207ENST00000535112 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
LDHB-207ENST00000535112 SPAG9O60271 1321 aaKnown RBP15.95■□□□□ 0.14
LDHB-207ENST00000535112 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
LDHB-207ENST00000535112 PTPRMP28827 1452 aa15.95■□□□□ 0.14
LDHB-207ENST00000535112 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
LDHB-207ENST00000535112 A2MP01023 1474 aa15.92■□□□□ 0.14
LDHB-207ENST00000535112 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
LDHB-207ENST00000535112 C3P01024 1663 aa15.92■□□□□ 0.14
LDHB-207ENST00000535112 CLTCQ00610 1675 aaKnown RBP15.9■□□□□ 0.14
LDHB-207ENST00000535112 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
LDHB-207ENST00000535112 MLECQ14165 292 aa15.89■□□□□ 0.13
LDHB-207ENST00000535112 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
LDHB-207ENST00000535112 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
LDHB-207ENST00000535112 DAPK1P53355 1430 aa15.86■□□□□ 0.13
LDHB-207ENST00000535112 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
LDHB-207ENST00000535112 ABCC5O15440 1437 aa15.85■□□□□ 0.13
LDHB-207ENST00000535112 PREX1Q8TCU6 1659 aa15.84■□□□□ 0.13
LDHB-207ENST00000535112 PPARGC1BQ86YN6 1023 aaKnown RBP15.83■□□□□ 0.12
LDHB-207ENST00000535112 RSPH4AQ5TD94 716 aa15.82■□□□□ 0.12
LDHB-207ENST00000535112 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
LDHB-207ENST00000535112 CEP152O94986 1710 aa15.82■□□□□ 0.12
LDHB-207ENST00000535112 DHX29Q7Z478 1369 aaKnown RBP15.81■□□□□ 0.12
LDHB-207ENST00000535112 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
LDHB-207ENST00000535112 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
LDHB-207ENST00000535112 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
LDHB-207ENST00000535112 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
LDHB-207ENST00000535112 DEPDC5O75140 1603 aa15.79■□□□□ 0.12
LDHB-207ENST00000535112 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
LDHB-207ENST00000535112 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
LDHB-207ENST00000535112 SETD1BQ9UPS6 1966 aaKnown RBP15.77■□□□□ 0.12
LDHB-207ENST00000535112 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
LDHB-207ENST00000535112 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.11
LDHB-207ENST00000535112 FAM135AQ9P2D6 1515 aa15.77■□□□□ 0.11
LDHB-207ENST00000535112 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms