RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
TMEM258-202ENST00000535042 PHLDB1Q86UU1 1377 aa20.49■□□□□ 0.87
TMEM258-202ENST00000535042 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
TMEM258-202ENST00000535042 PREX2Q70Z35 1606 aa20.49■□□□□ 0.87
TMEM258-202ENST00000535042 CDC42BPAQ5VT25 1732 aa20.48■□□□□ 0.87
TMEM258-202ENST00000535042 CDC42BPBQ9Y5S2 1711 aa20.48■□□□□ 0.87
TMEM258-202ENST00000535042 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
TMEM258-202ENST00000535042 KDM6BO15054 1643 aa20.48■□□□□ 0.87
TMEM258-202ENST00000535042 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
TMEM258-202ENST00000535042 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
TMEM258-202ENST00000535042 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
TMEM258-202ENST00000535042 RAPGEF3O95398 923 aa20.43■□□□□ 0.86
TMEM258-202ENST00000535042 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
TMEM258-202ENST00000535042 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
TMEM258-202ENST00000535042 ZNF644Q9H582 1327 aaPredicted RBP20.42■□□□□ 0.86
TMEM258-202ENST00000535042 DENND4BO75064 1496 aaPredicted RBP20.4■□□□□ 0.86
TMEM258-202ENST00000535042 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
TMEM258-202ENST00000535042 SAMD9LQ8IVG5 1584 aa20.39■□□□□ 0.85
TMEM258-202ENST00000535042 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.85
TMEM258-202ENST00000535042 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
TMEM258-202ENST00000535042 ABCC1P33527 1531 aa20.37■□□□□ 0.85
TMEM258-202ENST00000535042 FRMPD1Q5SYB0 1578 aa20.37■□□□□ 0.85
TMEM258-202ENST00000535042 HNRNPMP52272 730 aaKnown RBP eCLIP20.36■□□□□ 0.85
TMEM258-202ENST00000535042 POGZQ7Z3K3 1410 aa20.36■□□□□ 0.85
TMEM258-202ENST00000535042 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
TMEM258-202ENST00000535042 AFAP1Q8N556 730 aa20.35■□□□□ 0.85
TMEM258-202ENST00000535042 MIA2Q96PC5 1412 aa20.35■□□□□ 0.85
TMEM258-202ENST00000535042 KIAA1107Q9UPP5 1409 aa20.34■□□□□ 0.85
TMEM258-202ENST00000535042 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
TMEM258-202ENST00000535042 CAMSAP2Q08AD1 1489 aa20.32■□□□□ 0.84
TMEM258-202ENST00000535042 PLEKHH2Q8IVE3 1493 aa20.32■□□□□ 0.84
TMEM258-202ENST00000535042 RICTORQ6R327 1708 aa20.32■□□□□ 0.84
TMEM258-202ENST00000535042 FGD6Q6ZV73 1430 aa20.31■□□□□ 0.84
TMEM258-202ENST00000535042 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
TMEM258-202ENST00000535042 ZNF518AQ6AHZ1 1483 aa20.29■□□□□ 0.84
TMEM258-202ENST00000535042 ZMYM4Q5VZL5 1548 aa20.27■□□□□ 0.83
TMEM258-202ENST00000535042 KDM5CP41229 1560 aa20.26■□□□□ 0.83
TMEM258-202ENST00000535042 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
TMEM258-202ENST00000535042 YEATS2Q9ULM3 1422 aa20.25■□□□□ 0.83
TMEM258-202ENST00000535042 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
TMEM258-202ENST00000535042 MAGI2Q86UL8 1455 aa20.22■□□□□ 0.83
TMEM258-202ENST00000535042 MLH3Q9UHC1 1453 aa20.22■□□□□ 0.83
TMEM258-202ENST00000535042 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
TMEM258-202ENST00000535042 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
TMEM258-202ENST00000535042 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
TMEM258-202ENST00000535042 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
TMEM258-202ENST00000535042 ZFYVE16Q7Z3T8 1539 aa20.2■□□□□ 0.82
TMEM258-202ENST00000535042 ARHGEF5Q12774 1597 aa20.2■□□□□ 0.82
TMEM258-202ENST00000535042 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
TMEM258-202ENST00000535042 HECW2Q9P2P5 1572 aa20.18■□□□□ 0.82
TMEM258-202ENST00000535042 ABCC5O15440 1437 aa20.18■□□□□ 0.82
TMEM258-202ENST00000535042 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
TMEM258-202ENST00000535042 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
TMEM258-202ENST00000535042 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.81
TMEM258-202ENST00000535042 ATP7AQ04656 1500 aa20.14■□□□□ 0.81
TMEM258-202ENST00000535042 DAPK1P53355 1430 aa20.14■□□□□ 0.81
TMEM258-202ENST00000535042 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
TMEM258-202ENST00000535042 TSPY4P0CV99 314 aa20.14■□□□□ 0.81
TMEM258-202ENST00000535042 TSPY10P0CW01 314 aa20.14■□□□□ 0.81
TMEM258-202ENST00000535042 DIP2CQ9Y2E4 1556 aa20.13■□□□□ 0.81
TMEM258-202ENST00000535042 ATP10AO60312 1499 aa20.13■□□□□ 0.81
TMEM258-202ENST00000535042 RTEL1-TNFRSF6BF6WH68 1400 aa20.13■□□□□ 0.81
TMEM258-202ENST00000535042 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
TMEM258-202ENST00000535042 DNMT1P26358 1616 aaKnown RBP20.11■□□□□ 0.81
TMEM258-202ENST00000535042 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
TMEM258-202ENST00000535042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.1■□□□□ 0.814e-9■□□□□ 11
TMEM258-202ENST00000535042 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
TMEM258-202ENST00000535042 MAST1Q9Y2H9 1570 aa20.08■□□□□ 0.81
TMEM258-202ENST00000535042 SIGLEC1Q9BZZ2 1709 aa20.08■□□□□ 0.81
TMEM258-202ENST00000535042 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.81
TMEM258-202ENST00000535042 SHANK2Q9UPX8 1470 aa20.07■□□□□ 0.8
TMEM258-202ENST00000535042 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
TMEM258-202ENST00000535042 ITGAEP38570 1179 aa20.05■□□□□ 0.8
TMEM258-202ENST00000535042 CROCC2H7BZ55 1655 aa20.05■□□□□ 0.8
TMEM258-202ENST00000535042 A2MP01023 1474 aa20.05■□□□□ 0.8
TMEM258-202ENST00000535042 REREQ9P2R6 1566 aa20.04■□□□□ 0.8
TMEM258-202ENST00000535042 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
TMEM258-202ENST00000535042 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
TMEM258-202ENST00000535042 KDM4FA0A1W2PPD8 638 aa20.01■□□□□ 0.79
TMEM258-202ENST00000535042 MLECQ14165 292 aa20■□□□□ 0.79
TMEM258-202ENST00000535042 AGLP35573 1532 aa20■□□□□ 0.79
TMEM258-202ENST00000535042 NCOA1Q15788 1441 aa20■□□□□ 0.79
TMEM258-202ENST00000535042 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
TMEM258-202ENST00000535042 PLXNC1O60486 1568 aa20■□□□□ 0.79
TMEM258-202ENST00000535042 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
TMEM258-202ENST00000535042 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
TMEM258-202ENST00000535042 KIF15Q9NS87 1388 aa19.98■□□□□ 0.79
TMEM258-202ENST00000535042 BCORL1Q5H9F3 1711 aa19.95■□□□□ 0.78
TMEM258-202ENST00000535042 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
TMEM258-202ENST00000535042 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
TMEM258-202ENST00000535042 KIF3BO15066 747 aa19.93■□□□□ 0.78
TMEM258-202ENST00000535042 ADAMTSL3P82987 1691 aa19.91■□□□□ 0.78
TMEM258-202ENST00000535042 GGT6Q6P531 493 aa19.91■□□□□ 0.78
TMEM258-202ENST00000535042 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
TMEM258-202ENST00000535042 ANKRD50Q9ULJ7 1429 aa19.87■□□□□ 0.77
TMEM258-202ENST00000535042 MADDQ8WXG6 1647 aa19.87■□□□□ 0.77
TMEM258-202ENST00000535042 EIF2AK4Q9P2K8 1649 aaKnown RBP19.84■□□□□ 0.77
TMEM258-202ENST00000535042 NAIPQ13075 1403 aa19.83■□□□□ 0.76
TMEM258-202ENST00000535042 MROH1Q8NDA8 1641 aa19.81■□□□□ 0.76
TMEM258-202ENST00000535042 RNF17Q9BXT8 1623 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms